Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
CTC1Q2NKJ3 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CTC1Q2NKJ3 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
CTC1Q2NKJ3 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4.77□□□□□ -1.65
CTC1Q2NKJ3 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.77□□□□□ -1.65
CTC1Q2NKJ3 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CTC1Q2NKJ3 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
CTC1Q2NKJ3 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CTC1Q2NKJ3 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CTC1Q2NKJ3 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CTC1Q2NKJ3 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CTC1Q2NKJ3 Y_RNA.85-201ENST00000363014 111 ntBASIC4.76□□□□□ -1.65
CTC1Q2NKJ3 SNORA62.3-201ENST00000365110 153 ntBASIC4.76□□□□□ -1.65
CTC1Q2NKJ3 MIR554-201ENST00000384874 96 ntBASIC4.76□□□□□ -1.65
CTC1Q2NKJ3 AL031003.1-201ENST00000404229 172 ntBASIC4.76□□□□□ -1.65
CTC1Q2NKJ3 HDGFP1-201ENST00000405943 252 ntBASIC4.76□□□□□ -1.65
CTC1Q2NKJ3 SNORA11F-201ENST00000408237 128 ntBASIC4.76□□□□□ -1.65
CTC1Q2NKJ3 RNU6-855P-201ENST00000410395 104 ntBASIC4.76□□□□□ -1.65
CTC1Q2NKJ3 AC079780.1-201ENST00000428259 207 ntBASIC4.76□□□□□ -1.65
CTC1Q2NKJ3 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC4.76□□□□□ -1.65
CTC1Q2NKJ3 RNA5SP290-201ENST00000517133 127 ntBASIC4.76□□□□□ -1.65
CTC1Q2NKJ3 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC4.76□□□□□ -1.65
CTC1Q2NKJ3 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC4.76□□□□□ -1.65
CTC1Q2NKJ3 MIR5688-201ENST00000580619 83 ntBASIC4.76□□□□□ -1.65
CTC1Q2NKJ3 AC024220.1-201ENST00000603675 484 ntBASIC4.76□□□□□ -1.65
CTC1Q2NKJ3 AC027309.3-201ENST00000623419 351 ntBASIC4.76□□□□□ -1.65
CTC1Q2NKJ3 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
CTC1Q2NKJ3 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.76□□□□□ -1.65
CTC1Q2NKJ3 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CTC1Q2NKJ3 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.76□□□□□ -1.65
CTC1Q2NKJ3 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.76□□□□□ -1.65
CTC1Q2NKJ3 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CTC1Q2NKJ3 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CTC1Q2NKJ3 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CTC1Q2NKJ3 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CTC1Q2NKJ3 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CTC1Q2NKJ3 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CTC1Q2NKJ3 AL133243.3-201ENST00000617415 3004 ntBASIC4.75□□□□□ -1.65
CTC1Q2NKJ3 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
CTC1Q2NKJ3 RNU6-309P-201ENST00000364573 106 ntBASIC4.75□□□□□ -1.65
CTC1Q2NKJ3 SNORA11.1-201ENST00000408133 129 ntBASIC4.75□□□□□ -1.65
CTC1Q2NKJ3 NDUFS5P4-201ENST00000412983 318 ntBASIC4.75□□□□□ -1.65
CTC1Q2NKJ3 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC4.75□□□□□ -1.65
CTC1Q2NKJ3 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.75□□□□□ -1.65
CTC1Q2NKJ3 AL356095.1-201ENST00000417217 199 ntBASIC4.75□□□□□ -1.65
CTC1Q2NKJ3 AL117339.2-201ENST00000430475 180 ntBASIC4.75□□□□□ -1.65
CTC1Q2NKJ3 SNORD108-201ENST00000459332 71 ntBASIC4.75□□□□□ -1.65
CTC1Q2NKJ3 RNA5SP291-201ENST00000517222 105 ntBASIC4.75□□□□□ -1.65
CTC1Q2NKJ3 AC113403.1-201ENST00000604910 193 ntBASIC4.75□□□□□ -1.65
CTC1Q2NKJ3 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.75□□□□□ -1.65
CTC1Q2NKJ3 MESTIT1_1.1-201ENST00000618871 140 ntBASIC4.75□□□□□ -1.65
CTC1Q2NKJ3 AC112484.5-201ENST00000624189 228 ntBASIC4.75□□□□□ -1.65
CTC1Q2NKJ3 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
CTC1Q2NKJ3 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CTC1Q2NKJ3 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
CTC1Q2NKJ3 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CTC1Q2NKJ3 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC4.75□□□□□ -1.65
CTC1Q2NKJ3 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.74□□□□□ -1.65
CTC1Q2NKJ3 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.74□□□□□ -1.65
CTC1Q2NKJ3 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CTC1Q2NKJ3 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
CTC1Q2NKJ3 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
CTC1Q2NKJ3 AC022336.2-201ENST00000568966 2538 ntBASIC4.74□□□□□ -1.65
CTC1Q2NKJ3 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CTC1Q2NKJ3 RNA5SP125-201ENST00000364843 120 ntBASIC4.74□□□□□ -1.65
CTC1Q2NKJ3 Y_RNA.341-201ENST00000365341 102 ntBASIC4.74□□□□□ -1.65
CTC1Q2NKJ3 SNORD18B-201ENST00000365659 72 ntBASIC4.74□□□□□ -1.65
CTC1Q2NKJ3 RNU6-629P-201ENST00000384061 103 ntBASIC4.74□□□□□ -1.65
CTC1Q2NKJ3 Y_RNA.549-201ENST00000384657 102 ntBASIC4.74□□□□□ -1.65
CTC1Q2NKJ3 MIR921-201ENST00000401133 56 ntBASIC4.74□□□□□ -1.65
CTC1Q2NKJ3 MIR1255A-201ENST00000408338 113 ntBASIC4.74□□□□□ -1.65
CTC1Q2NKJ3 AL590383.1-201ENST00000428602 75 ntBASIC4.74□□□□□ -1.65
CTC1Q2NKJ3 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC4.74□□□□□ -1.65
CTC1Q2NKJ3 AC010469.1-201ENST00000463864 576 ntBASIC4.74□□□□□ -1.65
CTC1Q2NKJ3 AC010285.1-201ENST00000470580 392 ntBASIC4.74□□□□□ -1.65
CTC1Q2NKJ3 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC4.74□□□□□ -1.65
CTC1Q2NKJ3 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC4.74□□□□□ -1.65
CTC1Q2NKJ3 SNRPGP15-201ENST00000600149 222 ntBASIC4.74□□□□□ -1.65
CTC1Q2NKJ3 MIR6867-201ENST00000610636 67 ntBASIC4.74□□□□□ -1.65
CTC1Q2NKJ3 uc_338.13-201ENST00000618243 179 ntBASIC4.74□□□□□ -1.65
CTC1Q2NKJ3 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CTC1Q2NKJ3 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
CTC1Q2NKJ3 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
CTC1Q2NKJ3 AC068254.2-201ENST00000623938 3577 ntBASIC4.74□□□□□ -1.65
CTC1Q2NKJ3 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.73□□□□□ -1.65
CTC1Q2NKJ3 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
CTC1Q2NKJ3 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CTC1Q2NKJ3 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
CTC1Q2NKJ3 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
CTC1Q2NKJ3 AC107068.1-201ENST00000563286 4218 ntBASIC4.73□□□□□ -1.65
CTC1Q2NKJ3 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC4.73□□□□□ -1.65
CTC1Q2NKJ3 SNORA71.3-201ENST00000362582 128 ntBASIC4.73□□□□□ -1.65
CTC1Q2NKJ3 RNY1P10-201ENST00000363268 113 ntBASIC4.73□□□□□ -1.65
CTC1Q2NKJ3 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
CTC1Q2NKJ3 PTMAP2-201ENST00000397627 327 ntBASIC4.73□□□□□ -1.65
CTC1Q2NKJ3 SNORA79-201ENST00000408376 140 ntBASIC4.73□□□□□ -1.65
CTC1Q2NKJ3 CYCSP19-201ENST00000411715 316 ntBASIC4.73□□□□□ -1.65
CTC1Q2NKJ3 AL135786.1-201ENST00000415892 214 ntBASIC4.73□□□□□ -1.65
CTC1Q2NKJ3 Z74021.1-201ENST00000423610 407 ntBASIC4.73□□□□□ -1.65
CTC1Q2NKJ3 RPL27AP8-201ENST00000424277 446 ntBASIC4.73□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 120.8 ms