Protein–RNA interactions for Protein: P14543

NID1, Nidogen-1, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NID1P14543 RNU6ATAC34P-201ENST00000408879 121 ntBASIC4.06□□□□□ -1.76
NID1P14543 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.06□□□□□ -1.76
NID1P14543 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.06□□□□□ -1.76
NID1P14543 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC4.06□□□□□ -1.76
NID1P14543 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC4.06□□□□□ -1.76
NID1P14543 RN7SL812P-201ENST00000493791 279 ntBASIC4.06□□□□□ -1.76
NID1P14543 AC015795.1-201ENST00000513669 327 ntBASIC4.06□□□□□ -1.76
NID1P14543 SNORA31.8-201ENST00000516327 108 ntBASIC4.06□□□□□ -1.76
NID1P14543 SNORA31.16-201ENST00000516773 139 ntBASIC4.06□□□□□ -1.76
NID1P14543 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
NID1P14543 AP005019.3-201ENST00000620418 560 ntBASIC4.06□□□□□ -1.76
NID1P14543 MIR7154-201ENST00000620673 73 ntBASIC4.06□□□□□ -1.76
NID1P14543 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
NID1P14543 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.06□□□□□ -1.76
NID1P14543 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
NID1P14543 AL136164.4-201ENST00000625013 2135 ntBASIC4.06□□□□□ -1.76
NID1P14543 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.05□□□□□ -1.76
NID1P14543 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.05□□□□□ -1.76
NID1P14543 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.05□□□□□ -1.76
NID1P14543 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
NID1P14543 RNU1-15P-201ENST00000353977 144 ntBASIC4.05□□□□□ -1.76
NID1P14543 RNU1-108P-201ENST00000362556 161 ntBASIC4.05□□□□□ -1.76
NID1P14543 RNY1P11-201ENST00000363759 113 ntBASIC4.05□□□□□ -1.76
NID1P14543 SNORD115-30-201ENST00000364117 82 ntBASIC4.05□□□□□ -1.76
NID1P14543 Y_RNA.229-201ENST00000364347 113 ntBASIC4.05□□□□□ -1.76
NID1P14543 RNA5SP515-201ENST00000364570 118 ntBASIC4.05□□□□□ -1.76
NID1P14543 Y_RNA.415-201ENST00000384012 112 ntBASIC4.05□□□□□ -1.76
NID1P14543 RNU6-1181P-201ENST00000384191 106 ntBASIC4.05□□□□□ -1.76
NID1P14543 MIR3065-201ENST00000390137 79 ntBASIC4.05□□□□□ -1.76
NID1P14543 RPL21P17-201ENST00000397467 475 ntBASIC4.05□□□□□ -1.76
NID1P14543 MIR1911-201ENST00000410783 80 ntBASIC4.05□□□□□ -1.76
NID1P14543 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC4.05□□□□□ -1.76
NID1P14543 AC006517.1-201ENST00000480485 328 ntBASIC4.05□□□□□ -1.76
NID1P14543 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC4.05□□□□□ -1.76
NID1P14543 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC4.05□□□□□ -1.76
NID1P14543 HMGB1P22-201ENST00000505315 124 ntBASIC4.05□□□□□ -1.76
NID1P14543 RNU6-561P-201ENST00000516222 102 ntBASIC4.05□□□□□ -1.76
NID1P14543 MIR5582-201ENST00000579697 68 ntBASIC4.05□□□□□ -1.76
NID1P14543 MIR3939-201ENST00000582614 106 ntBASIC4.05□□□□□ -1.76
NID1P14543 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.05□□□□□ -1.76
NID1P14543 AC025946.2-201ENST00000603398 234 ntBASIC4.05□□□□□ -1.76
NID1P14543 AC079587.1-201ENST00000603846 277 ntBASIC4.05□□□□□ -1.76
NID1P14543 AL356218.2-201ENST00000605264 187 ntBASIC4.05□□□□□ -1.76
NID1P14543 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
NID1P14543 AC068647.2-201ENST00000637380 353 ntBASIC4.05□□□□□ -1.76
NID1P14543 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.05□□□□□ -1.76
NID1P14543 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
NID1P14543 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.05□□□□□ -1.76
NID1P14543 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
NID1P14543 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
NID1P14543 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
NID1P14543 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
NID1P14543 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.04□□□□□ -1.76
NID1P14543 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.04□□□□□ -1.76
NID1P14543 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.04□□□□□ -1.76
NID1P14543 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
NID1P14543 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC4.04□□□□□ -1.76
NID1P14543 AC025031.4-201ENST00000621248 3271 ntBASIC4.04□□□□□ -1.76
NID1P14543 DLEU2_6.3-201ENST00000340052 136 ntBASIC4.04□□□□□ -1.76
NID1P14543 Y_RNA.294-201ENST00000364916 102 ntBASIC4.04□□□□□ -1.76
NID1P14543 Y_RNA.368-201ENST00000365547 113 ntBASIC4.04□□□□□ -1.76
NID1P14543 MIR708-201ENST00000390708 88 ntBASIC4.04□□□□□ -1.76
NID1P14543 MIR208B-201ENST00000401172 77 ntBASIC4.04□□□□□ -1.76
NID1P14543 RNU6-855P-201ENST00000410395 104 ntBASIC4.04□□□□□ -1.76
NID1P14543 AL714022.1-201ENST00000439897 151 ntBASIC4.04□□□□□ -1.76
NID1P14543 AC010618.1-201ENST00000469924 477 ntBASIC4.04□□□□□ -1.76
NID1P14543 RPL31P41-201ENST00000477967 372 ntBASIC4.04□□□□□ -1.76
NID1P14543 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC4.04□□□□□ -1.76
NID1P14543 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC4.04□□□□□ -1.76
NID1P14543 NDUFA5P6-201ENST00000542110 379 ntBASIC4.04□□□□□ -1.76
NID1P14543 CYP4A27P-201ENST00000567218 190 ntBASIC4.04□□□□□ -1.76
NID1P14543 MTND6P33-201ENST00000571794 183 ntBASIC4.04□□□□□ -1.76
NID1P14543 MIR4724-201ENST00000579485 89 ntBASIC4.04□□□□□ -1.76
NID1P14543 MIR3121-201ENST00000579680 77 ntBASIC4.04□□□□□ -1.76
NID1P14543 SNRPGP15-201ENST00000600149 222 ntBASIC4.04□□□□□ -1.76
NID1P14543 AC108081.1-201ENST00000604358 221 ntBASIC4.04□□□□□ -1.76
NID1P14543 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.04□□□□□ -1.76
NID1P14543 AL162713.1-201ENST00000604480 262 ntBASIC4.04□□□□□ -1.76
NID1P14543 ARF4P1-201ENST00000605447 541 ntBASIC4.04□□□□□ -1.76
NID1P14543 AL591034.3-201ENST00000605511 685 ntBASIC4.04□□□□□ -1.76
NID1P14543 DLEU2_6.2-201ENST00000620994 136 ntBASIC4.04□□□□□ -1.76
NID1P14543 MIR3529-201ENST00000637713 78 ntBASIC4.04□□□□□ -1.76
NID1P14543 ADAM3A-203ENST00000461344 2157 ntBASIC4.04□□□□□ -1.76
NID1P14543 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.04□□□□□ -1.76
NID1P14543 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
NID1P14543 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
NID1P14543 AL356489.2-201ENST00000566968 3528 ntBASIC4.04□□□□□ -1.76
NID1P14543 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
NID1P14543 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
NID1P14543 MIR367-201ENST00000362299 68 ntBASIC4.03□□□□□ -1.76
NID1P14543 RNU6-1280P-201ENST00000365211 107 ntBASIC4.03□□□□□ -1.76
NID1P14543 Y_RNA.341-201ENST00000365341 102 ntBASIC4.03□□□□□ -1.76
NID1P14543 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
NID1P14543 RNU6-217P-201ENST00000384164 104 ntBASIC4.03□□□□□ -1.76
NID1P14543 Y_RNA.456-201ENST00000384232 111 ntBASIC4.03□□□□□ -1.76
NID1P14543 MIR23B-201ENST00000384832 97 ntBASIC4.03□□□□□ -1.76
NID1P14543 SNORA40.5-201ENST00000391061 128 ntBASIC4.03□□□□□ -1.76
NID1P14543 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC4.03□□□□□ -1.76
NID1P14543 ABCF2P2-201ENST00000450549 296 ntBASIC4.03□□□□□ -1.76
NID1P14543 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 133.7 ms