Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 AP003355.1-201ENST00000518956 587 ntBASIC0.36□□□□□ -2.35
ABCA1O95477 AL133153.1-201ENST00000557756 303 ntBASIC0.36□□□□□ -2.35
ABCA1O95477 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC0.36□□□□□ -2.35
ABCA1O95477 MIR4636-201ENST00000582271 80 ntBASIC0.36□□□□□ -2.35
ABCA1O95477 AF038458.1-201ENST00000588406 262 ntBASIC0.36□□□□□ -2.35
ABCA1O95477 AP003465.2-201ENST00000602571 373 ntBASIC0.36□□□□□ -2.35
ABCA1O95477 AC231657.1-201ENST00000624313 397 ntBASIC0.36□□□□□ -2.35
ABCA1O95477 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC0.36□□□□□ -2.35
ABCA1O95477 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.36□□□□□ -2.35
ABCA1O95477 Y_RNA.597-201ENST00000410463 100 ntBASIC0.36□□□□□ -2.35
ABCA1O95477 AL627311.1-201ENST00000431514 115 ntBASIC0.36□□□□□ -2.35
ABCA1O95477 MTND2P4-201ENST00000445034 1004 ntBASIC0.36□□□□□ -2.35
ABCA1O95477 SNORA3.4-201ENST00000515969 96 ntBASIC0.36□□□□□ -2.35
ABCA1O95477 SNORA31.3-201ENST00000516029 96 ntBASIC0.36□□□□□ -2.35
ABCA1O95477 AP001981.2-201ENST00000603241 418 ntBASIC0.36□□□□□ -2.35
ABCA1O95477 AC069114.2-201ENST00000604699 304 ntBASIC0.36□□□□□ -2.35
ABCA1O95477 AC112220.3-201ENST00000605502 502 ntBASIC0.36□□□□□ -2.35
ABCA1O95477 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC0.36□□□□□ -2.35
ABCA1O95477 MIR16-2-201ENST00000362117 81 ntBASIC0.35□□□□□ -2.35
ABCA1O95477 RNU6-655P-201ENST00000362858 107 ntBASIC0.35□□□□□ -2.35
ABCA1O95477 RNU6-343P-201ENST00000364709 104 ntBASIC0.35□□□□□ -2.35
ABCA1O95477 MIR200A-201ENST00000384875 90 ntBASIC0.35□□□□□ -2.35
ABCA1O95477 SNORA48.1-201ENST00000390879 135 ntBASIC0.35□□□□□ -2.35
ABCA1O95477 AL031577.2-201ENST00000404133 280 ntBASIC0.35□□□□□ -2.35
ABCA1O95477 AL356776.1-201ENST00000406574 447 ntBASIC0.35□□□□□ -2.35
ABCA1O95477 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC0.35□□□□□ -2.35
ABCA1O95477 RNU1-131P-201ENST00000458943 161 ntBASIC0.35□□□□□ -2.35
ABCA1O95477 TRBVB-201ENST00000477100 408 ntBASIC0.35□□□□□ -2.35
ABCA1O95477 AC074344.1-201ENST00000512823 224 ntBASIC0.35□□□□□ -2.35
ABCA1O95477 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC0.35□□□□□ -2.35
ABCA1O95477 NDUFAF4P1-201ENST00000559425 519 ntBASIC0.35□□□□□ -2.35
ABCA1O95477 MIR3912-201ENST00000577566 105 ntBASIC0.35□□□□□ -2.35
ABCA1O95477 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.35□□□□□ -2.35
ABCA1O95477 uc_338.22-201ENST00000622722 187 ntBASIC0.35□□□□□ -2.35
ABCA1O95477 MIR3529-201ENST00000637713 78 ntBASIC0.35□□□□□ -2.35
ABCA1O95477 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.35□□□□□ -2.35
ABCA1O95477 RNU6-353P-201ENST00000364266 108 ntBASIC0.35□□□□□ -2.35
ABCA1O95477 RNU6-512P-201ENST00000364438 103 ntBASIC0.35□□□□□ -2.35
ABCA1O95477 RNU6-701P-201ENST00000384059 107 ntBASIC0.35□□□□□ -2.35
ABCA1O95477 RNU6-1122P-201ENST00000384449 107 ntBASIC0.35□□□□□ -2.35
ABCA1O95477 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC0.35□□□□□ -2.35
ABCA1O95477 CBX3P9-201ENST00000402326 552 ntBASIC0.35□□□□□ -2.35
ABCA1O95477 RAB28P5-201ENST00000427490 651 ntBASIC0.35□□□□□ -2.35
ABCA1O95477 AC104651.1-201ENST00000427559 735 ntBASIC0.35□□□□□ -2.35
ABCA1O95477 AL669831.1-202ENST00000428504 417 ntBASIC0.35□□□□□ -2.35
ABCA1O95477 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC0.35□□□□□ -2.35
ABCA1O95477 AC004854.1-201ENST00000440356 349 ntBASIC0.35□□□□□ -2.35
ABCA1O95477 AC005094.1-201ENST00000440420 368 ntBASIC0.35□□□□□ -2.35
ABCA1O95477 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC0.35□□□□□ -2.35
ABCA1O95477 TRBVA-201ENST00000498804 316 ntBASIC0.35□□□□□ -2.35
ABCA1O95477 RNU5F-2P-201ENST00000516066 82 ntBASIC0.35□□□□□ -2.35
ABCA1O95477 RNU6-572P-201ENST00000516724 80 ntBASIC0.35□□□□□ -2.35
ABCA1O95477 MTCO3P15-201ENST00000526563 574 ntBASIC0.35□□□□□ -2.35
ABCA1O95477 CENPUP1-201ENST00000526649 1202 ntBASIC0.35□□□□□ -2.35
ABCA1O95477 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC0.35□□□□□ -2.35
ABCA1O95477 AC008759.3-201ENST00000613300 508 ntBASIC0.35□□□□□ -2.35
ABCA1O95477 TUG1_2.1-201ENST00000614234 87 ntBASIC0.35□□□□□ -2.35
ABCA1O95477 AC121333.1-201ENST00000567488 2709 ntBASIC0.35□□□□□ -2.35
ABCA1O95477 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC0.34□□□□□ -2.35
ABCA1O95477 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.34□□□□□ -2.35
ABCA1O95477 RNU6-166P-201ENST00000384371 107 ntBASIC0.34□□□□□ -2.35
ABCA1O95477 RNU6-505P-201ENST00000384427 107 ntBASIC0.34□□□□□ -2.35
ABCA1O95477 RNU6-278P-201ENST00000390945 109 ntBASIC0.34□□□□□ -2.35
ABCA1O95477 RNU2-64P-201ENST00000411315 191 ntBASIC0.34□□□□□ -2.35
ABCA1O95477 AC069282.1-201ENST00000411911 526 ntBASIC0.34□□□□□ -2.35
ABCA1O95477 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC0.34□□□□□ -2.35
ABCA1O95477 C8orf59P1-201ENST00000429930 303 ntBASIC0.34□□□□□ -2.35
ABCA1O95477 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC0.34□□□□□ -2.35
ABCA1O95477 AL606489.2-201ENST00000433886 234 ntBASIC0.34□□□□□ -2.35
ABCA1O95477 MTND1P30-201ENST00000441241 901 ntBASIC0.34□□□□□ -2.35
ABCA1O95477 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.34□□□□□ -2.35
ABCA1O95477 RNU7-140P-201ENST00000459546 60 ntBASIC0.34□□□□□ -2.35
ABCA1O95477 AC145146.1-201ENST00000496370 254 ntBASIC0.34□□□□□ -2.35
ABCA1O95477 AC093809.1-201ENST00000509155 340 ntBASIC0.34□□□□□ -2.35
ABCA1O95477 AC079140.3-201ENST00000511111 550 ntBASIC0.34□□□□□ -2.35
ABCA1O95477 RNU6-143P-201ENST00000516942 93 ntBASIC0.34□□□□□ -2.35
ABCA1O95477 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC0.34□□□□□ -2.35
ABCA1O95477 AC240442.1-201ENST00000616055 283 ntBASIC0.34□□□□□ -2.35
ABCA1O95477 MIR1322-201ENST00000638013 71 ntBASIC0.34□□□□□ -2.35
ABCA1O95477 RNU6-1274P-201ENST00000384557 107 ntBASIC0.34□□□□□ -2.36
ABCA1O95477 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.34□□□□□ -2.36
ABCA1O95477 AL606490.4-201ENST00000423117 127 ntBASIC0.34□□□□□ -2.36
ABCA1O95477 SNX2P2-201ENST00000424553 323 ntBASIC0.34□□□□□ -2.36
ABCA1O95477 DEFB130D-201ENST00000426866 237 ntBASIC0.34□□□□□ -2.36
ABCA1O95477 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC0.34□□□□□ -2.36
ABCA1O95477 HMGN1P10-201ENST00000474557 553 ntBASIC0.34□□□□□ -2.36
ABCA1O95477 MED28P2-201ENST00000475771 317 ntBASIC0.34□□□□□ -2.36
ABCA1O95477 RNU6-496P-201ENST00000516145 99 ntBASIC0.34□□□□□ -2.36
ABCA1O95477 AL136520.1-202ENST00000555494 763 ntBASIC0.34□□□□□ -2.36
ABCA1O95477 RNU6ATAC35P-201ENST00000609276 444 ntBASIC0.34□□□□□ -2.36
ABCA1O95477 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC0.34□□□□□ -2.36
ABCA1O95477 MIR1305-201ENST00000408300 86 ntBASIC0.33□□□□□ -2.36
ABCA1O95477 RNU4-22P-201ENST00000411058 166 ntBASIC0.33□□□□□ -2.36
ABCA1O95477 MTCYBP5-201ENST00000423752 1135 ntBASIC0.33□□□□□ -2.36
ABCA1O95477 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC0.33□□□□□ -2.36
ABCA1O95477 MTCO2P25-201ENST00000447065 681 ntBASIC0.33□□□□□ -2.36
ABCA1O95477 AL157398.1-201ENST00000452981 186 ntBASIC0.33□□□□□ -2.36
ABCA1O95477 snoU13.27-201ENST00000459278 104 ntBASIC0.33□□□□□ -2.36
ABCA1O95477 AC121161.1-201ENST00000510606 652 ntBASIC0.33□□□□□ -2.36
ABCA1O95477 RNA5SP503-201ENST00000517047 117 ntBASIC0.33□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms