Protein–RNA interactions for Protein: O75400

PRPF40A, Pre-mRNA-processing factor 40 homolog A, humanhuman

Known RBP Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40AO75400 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC4.2□□□□□ -1.74
PRPF40AO75400 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC4.2□□□□□ -1.74
PRPF40AO75400 MIR376A1-201ENST00000616574 68 ntBASIC4.2□□□□□ -1.74
PRPF40AO75400 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
PRPF40AO75400 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC4.19□□□□□ -1.74
PRPF40AO75400 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
PRPF40AO75400 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
PRPF40AO75400 RNU6-212P-201ENST00000362642 104 ntBASIC4.19□□□□□ -1.74
PRPF40AO75400 Y_RNA.105-201ENST00000363182 111 ntBASIC4.19□□□□□ -1.74
PRPF40AO75400 RNU6-379P-201ENST00000363813 104 ntBASIC4.19□□□□□ -1.74
PRPF40AO75400 Y_RNA.350-201ENST00000365409 98 ntBASIC4.19□□□□□ -1.74
PRPF40AO75400 RFX3-203ENST00000381984 364 ntTSL 3 BASIC4.19□□□□□ -1.74
PRPF40AO75400 Y_RNA.447-201ENST00000384184 113 ntBASIC4.19□□□□□ -1.74
PRPF40AO75400 SNORA48.7-201ENST00000391302 135 ntBASIC4.19□□□□□ -1.74
PRPF40AO75400 AL133475.1-201ENST00000404414 305 ntBASIC4.19□□□□□ -1.74
PRPF40AO75400 RNU6-1077P-201ENST00000410506 102 ntBASIC4.19□□□□□ -1.74
PRPF40AO75400 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC4.19□□□□□ -1.74
PRPF40AO75400 AC096649.2-201ENST00000416186 393 ntBASIC4.19□□□□□ -1.74
PRPF40AO75400 RPL21P38-201ENST00000418090 167 ntBASIC4.19□□□□□ -1.74
PRPF40AO75400 AL590135.1-201ENST00000422215 156 ntBASIC4.19□□□□□ -1.74
PRPF40AO75400 AC096920.1-201ENST00000423991 241 ntBASIC4.19□□□□□ -1.74
PRPF40AO75400 AC019205.3-201ENST00000424573 156 ntBASIC4.19□□□□□ -1.74
PRPF40AO75400 EIF1P2-201ENST00000428233 350 ntBASIC4.19□□□□□ -1.74
PRPF40AO75400 snoU13.6-201ENST00000458785 104 ntBASIC4.19□□□□□ -1.74
PRPF40AO75400 AC010401.1-201ENST00000463867 348 ntBASIC4.19□□□□□ -1.74
PRPF40AO75400 RNU5B-3P-201ENST00000516601 115 ntBASIC4.19□□□□□ -1.74
PRPF40AO75400 RNU6-567P-201ENST00000516746 107 ntBASIC4.19□□□□□ -1.74
PRPF40AO75400 SNORA31.21-201ENST00000517180 77 ntBASIC4.19□□□□□ -1.74
PRPF40AO75400 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC4.19□□□□□ -1.74
PRPF40AO75400 AC023157.2-201ENST00000540596 141 ntBASIC4.19□□□□□ -1.74
PRPF40AO75400 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC4.19□□□□□ -1.74
PRPF40AO75400 MIR5695-201ENST00000579717 85 ntBASIC4.19□□□□□ -1.74
PRPF40AO75400 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC4.19□□□□□ -1.74
PRPF40AO75400 AC240442.1-201ENST00000616055 283 ntBASIC4.19□□□□□ -1.74
PRPF40AO75400 AC005296.1-201ENST00000616145 209 ntBASIC4.19□□□□□ -1.74
PRPF40AO75400 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC4.19□□□□□ -1.74
PRPF40AO75400 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
PRPF40AO75400 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
PRPF40AO75400 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
PRPF40AO75400 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC4.18□□□□□ -1.74
PRPF40AO75400 AL353746.1-201ENST00000566293 6881 ntBASIC4.18□□□□□ -1.74
PRPF40AO75400 RNU6-1285P-201ENST00000363480 105 ntBASIC4.18□□□□□ -1.74
PRPF40AO75400 RNU4-56P-201ENST00000364700 142 ntBASIC4.18□□□□□ -1.74
PRPF40AO75400 U8.10-201ENST00000384260 133 ntBASIC4.18□□□□□ -1.74
PRPF40AO75400 MIR30B-201ENST00000384850 88 ntBASIC4.18□□□□□ -1.74
PRPF40AO75400 RNU2-38P-201ENST00000410856 79 ntBASIC4.18□□□□□ -1.74
PRPF40AO75400 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC4.18□□□□□ -1.74
PRPF40AO75400 AL031183.1-201ENST00000457667 207 ntBASIC4.18□□□□□ -1.74
PRPF40AO75400 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC4.18□□□□□ -1.74
PRPF40AO75400 RN7SL323P-201ENST00000494712 295 ntBASIC4.18□□□□□ -1.74
PRPF40AO75400 RPL7P47-201ENST00000497299 556 ntBASIC4.18□□□□□ -1.74
PRPF40AO75400 RNU6-1012P-201ENST00000516606 109 ntBASIC4.18□□□□□ -1.74
PRPF40AO75400 RNU6-388P-201ENST00000517012 105 ntBASIC4.18□□□□□ -1.74
PRPF40AO75400 RNU6-389P-201ENST00000517048 105 ntBASIC4.18□□□□□ -1.74
PRPF40AO75400 AC027288.2-201ENST00000553028 243 ntBASIC4.18□□□□□ -1.74
PRPF40AO75400 MIR4659A-201ENST00000580269 81 ntBASIC4.18□□□□□ -1.74
PRPF40AO75400 AC073410.2-201ENST00000603240 332 ntBASIC4.18□□□□□ -1.74
PRPF40AO75400 RNU6-91P-201ENST00000607774 107 ntBASIC4.18□□□□□ -1.74
PRPF40AO75400 MESTIT1_1.1-201ENST00000618871 140 ntBASIC4.18□□□□□ -1.74
PRPF40AO75400 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC4.18□□□□□ -1.74
PRPF40AO75400 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
PRPF40AO75400 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
PRPF40AO75400 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC4.18□□□□□ -1.74
PRPF40AO75400 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
PRPF40AO75400 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
PRPF40AO75400 Y_RNA.143-201ENST00000363520 106 ntBASIC4.17□□□□□ -1.74
PRPF40AO75400 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC4.17□□□□□ -1.74
PRPF40AO75400 AL359837.1-201ENST00000381357 287 ntBASIC4.17□□□□□ -1.74
PRPF40AO75400 RNU6-926P-201ENST00000384075 107 ntBASIC4.17□□□□□ -1.74
PRPF40AO75400 RNU6-907P-201ENST00000390924 102 ntBASIC4.17□□□□□ -1.74
PRPF40AO75400 RNU6-750P-201ENST00000390946 107 ntBASIC4.17□□□□□ -1.74
PRPF40AO75400 RNU6-1140P-201ENST00000410517 106 ntBASIC4.17□□□□□ -1.74
PRPF40AO75400 RNU6-121P-201ENST00000410525 99 ntBASIC4.17□□□□□ -1.74
PRPF40AO75400 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC4.17□□□□□ -1.74
PRPF40AO75400 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC4.17□□□□□ -1.74
PRPF40AO75400 AL136097.1-201ENST00000456945 913 ntBASIC4.17□□□□□ -1.74
PRPF40AO75400 IGKV2-23-201ENST00000518729 323 ntBASIC4.17□□□□□ -1.74
PRPF40AO75400 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC4.17□□□□□ -1.74
PRPF40AO75400 AC025281.1-201ENST00000567026 265 ntBASIC4.17□□□□□ -1.74
PRPF40AO75400 AC005357.1-201ENST00000588399 301 ntBASIC4.17□□□□□ -1.74
PRPF40AO75400 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC4.17□□□□□ -1.74
PRPF40AO75400 AC011476.5-201ENST00000615594 130 ntBASIC4.17□□□□□ -1.74
PRPF40AO75400 AC022149.2-201ENST00000621061 203 ntBASIC4.17□□□□□ -1.74
PRPF40AO75400 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC4.17□□□□□ -1.74
PRPF40AO75400 AL450472.1-202ENST00000637286 180 ntBASIC4.17□□□□□ -1.74
PRPF40AO75400 DLD-214ENST00000639772 421 ntTSL 5 BASIC4.17□□□□□ -1.74
PRPF40AO75400 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
PRPF40AO75400 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
PRPF40AO75400 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
PRPF40AO75400 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
PRPF40AO75400 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
PRPF40AO75400 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
PRPF40AO75400 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC4.16□□□□□ -1.74
PRPF40AO75400 RNU6-137P-201ENST00000363680 108 ntBASIC4.16□□□□□ -1.74
PRPF40AO75400 SNORA62.3-201ENST00000365110 153 ntBASIC4.16□□□□□ -1.74
PRPF40AO75400 SNORA26.3-201ENST00000391119 136 ntBASIC4.16□□□□□ -1.74
PRPF40AO75400 AL079342.1-201ENST00000401460 267 ntBASIC4.16□□□□□ -1.74
PRPF40AO75400 RNU6ATAC-201ENST00000408749 126 ntBASIC4.16□□□□□ -1.74
PRPF40AO75400 AC012306.1-201ENST00000423267 114 ntBASIC4.16□□□□□ -1.74
PRPF40AO75400 WARS2P1-201ENST00000429678 537 ntBASIC4.16□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms