Protein–RNA interactions for Protein: Q9Y5E6

PCDHB3, Protocadherin beta-3, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3Q9Y5E6 BX323845.1-201ENST00000432417 179 ntBASIC4.78□□□□□ -1.64
PCDHB3Q9Y5E6 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC4.78□□□□□ -1.64
PCDHB3Q9Y5E6 RPS29P33-201ENST00000456717 146 ntBASIC4.78□□□□□ -1.64
PCDHB3Q9Y5E6 RPL30P5-201ENST00000494923 336 ntBASIC4.78□□□□□ -1.64
PCDHB3Q9Y5E6 SNORA40.13-201ENST00000516379 120 ntBASIC4.78□□□□□ -1.64
PCDHB3Q9Y5E6 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC4.78□□□□□ -1.64
PCDHB3Q9Y5E6 MIR3667-201ENST00000581025 74 ntBASIC4.78□□□□□ -1.64
PCDHB3Q9Y5E6 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC4.78□□□□□ -1.64
PCDHB3Q9Y5E6 AC006133.1-201ENST00000617106 264 ntBASIC4.78□□□□□ -1.64
PCDHB3Q9Y5E6 AC009831.4-201ENST00000620744 325 ntBASIC4.78□□□□□ -1.64
PCDHB3Q9Y5E6 RNF123-214ENST00000629802 207 ntTSL 5 BASIC4.78□□□□□ -1.64
PCDHB3Q9Y5E6 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
PCDHB3Q9Y5E6 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
PCDHB3Q9Y5E6 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.78□□□□□ -1.64
PCDHB3Q9Y5E6 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.78□□□□□ -1.65
PCDHB3Q9Y5E6 SALL4P2-201ENST00000423288 2910 ntBASIC4.77□□□□□ -1.65
PCDHB3Q9Y5E6 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC4.77□□□□□ -1.65
PCDHB3Q9Y5E6 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
PCDHB3Q9Y5E6 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC4.77□□□□□ -1.65
PCDHB3Q9Y5E6 U3.8-201ENST00000363675 217 ntBASIC4.77□□□□□ -1.65
PCDHB3Q9Y5E6 SNORA67.2-201ENST00000384300 149 ntBASIC4.77□□□□□ -1.65
PCDHB3Q9Y5E6 PTMAP5-201ENST00000393073 333 ntBASIC4.77□□□□□ -1.65
PCDHB3Q9Y5E6 SNORA77-201ENST00000408716 125 ntBASIC4.77□□□□□ -1.65
PCDHB3Q9Y5E6 CKS1BP6-201ENST00000424932 240 ntBASIC4.77□□□□□ -1.65
PCDHB3Q9Y5E6 AL591419.1-201ENST00000427423 339 ntBASIC4.77□□□□□ -1.65
PCDHB3Q9Y5E6 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.77□□□□□ -1.65
PCDHB3Q9Y5E6 AL356535.1-201ENST00000440335 398 ntBASIC4.77□□□□□ -1.65
PCDHB3Q9Y5E6 RPS29P9-201ENST00000440360 171 ntBASIC4.77□□□□□ -1.65
PCDHB3Q9Y5E6 HMGN2P10-201ENST00000448085 265 ntBASIC4.77□□□□□ -1.65
PCDHB3Q9Y5E6 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC4.77□□□□□ -1.65
PCDHB3Q9Y5E6 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
PCDHB3Q9Y5E6 AC008897.1-201ENST00000494006 347 ntBASIC4.77□□□□□ -1.65
PCDHB3Q9Y5E6 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.77□□□□□ -1.65
PCDHB3Q9Y5E6 IGKV1-32-201ENST00000519290 311 ntBASIC4.77□□□□□ -1.65
PCDHB3Q9Y5E6 IGKV1-22-201ENST00000524313 326 ntBASIC4.77□□□□□ -1.65
PCDHB3Q9Y5E6 AC091042.1-201ENST00000579213 173 ntBASIC4.77□□□□□ -1.65
PCDHB3Q9Y5E6 AL021707.8-201ENST00000609428 183 ntBASIC4.77□□□□□ -1.65
PCDHB3Q9Y5E6 uc_338.18-201ENST00000615451 175 ntBASIC4.77□□□□□ -1.65
PCDHB3Q9Y5E6 AL138880.2-201ENST00000616214 239 ntBASIC4.77□□□□□ -1.65
PCDHB3Q9Y5E6 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
PCDHB3Q9Y5E6 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.77□□□□□ -1.65
PCDHB3Q9Y5E6 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.77□□□□□ -1.65
PCDHB3Q9Y5E6 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.77□□□□□ -1.65
PCDHB3Q9Y5E6 AL136964.1-201ENST00000622038 2990 ntBASIC4.77□□□□□ -1.65
PCDHB3Q9Y5E6 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.76□□□□□ -1.65
PCDHB3Q9Y5E6 TLK1P1-201ENST00000456760 2440 ntBASIC4.76□□□□□ -1.65
PCDHB3Q9Y5E6 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC4.76□□□□□ -1.65
PCDHB3Q9Y5E6 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.76□□□□□ -1.65
PCDHB3Q9Y5E6 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.76□□□□□ -1.65
PCDHB3Q9Y5E6 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
PCDHB3Q9Y5E6 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
PCDHB3Q9Y5E6 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
PCDHB3Q9Y5E6 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
PCDHB3Q9Y5E6 Y_RNA.124-201ENST00000363339 93 ntBASIC4.76□□□□□ -1.65
PCDHB3Q9Y5E6 RNU6-573P-201ENST00000383938 106 ntBASIC4.76□□□□□ -1.65
PCDHB3Q9Y5E6 SNORD12C-201ENST00000386307 89 ntBASIC4.76□□□□□ -1.65
PCDHB3Q9Y5E6 AL450023.3-201ENST00000440592 271 ntBASIC4.76□□□□□ -1.65
PCDHB3Q9Y5E6 RNU6-1299P-201ENST00000516316 100 ntBASIC4.76□□□□□ -1.65
PCDHB3Q9Y5E6 Y_RNA.685-201ENST00000516532 108 ntBASIC4.76□□□□□ -1.65
PCDHB3Q9Y5E6 ACA59.2-201ENST00000517061 156 ntBASIC4.76□□□□□ -1.65
PCDHB3Q9Y5E6 POC1B-211ENST00000549504 581 ntTSL 5 BASIC4.76□□□□□ -1.65
PCDHB3Q9Y5E6 EIF4A1P12-201ENST00000551910 141 ntBASIC4.76□□□□□ -1.65
PCDHB3Q9Y5E6 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC4.76□□□□□ -1.65
PCDHB3Q9Y5E6 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC4.76□□□□□ -1.65
PCDHB3Q9Y5E6 AC007012.1-201ENST00000567192 175 ntBASIC4.76□□□□□ -1.65
PCDHB3Q9Y5E6 MIR4697-201ENST00000582977 78 ntBASIC4.76□□□□□ -1.65
PCDHB3Q9Y5E6 POLR3GP1-201ENST00000594073 261 ntBASIC4.76□□□□□ -1.65
PCDHB3Q9Y5E6 AL022345.2-201ENST00000606307 135 ntBASIC4.76□□□□□ -1.65
PCDHB3Q9Y5E6 MIR6810-201ENST00000622701 70 ntBASIC4.76□□□□□ -1.65
PCDHB3Q9Y5E6 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
PCDHB3Q9Y5E6 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
PCDHB3Q9Y5E6 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
PCDHB3Q9Y5E6 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.75□□□□□ -1.65
PCDHB3Q9Y5E6 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
PCDHB3Q9Y5E6 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.75□□□□□ -1.65
PCDHB3Q9Y5E6 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
PCDHB3Q9Y5E6 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.75□□□□□ -1.65
PCDHB3Q9Y5E6 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
PCDHB3Q9Y5E6 MIR488-201ENST00000365739 83 ntBASIC4.75□□□□□ -1.65
PCDHB3Q9Y5E6 SNORA18.2-201ENST00000383865 132 ntBASIC4.75□□□□□ -1.65
PCDHB3Q9Y5E6 SNORD116-13-201ENST00000384408 92 ntBASIC4.75□□□□□ -1.65
PCDHB3Q9Y5E6 U8.12-201ENST00000384701 133 ntBASIC4.75□□□□□ -1.65
PCDHB3Q9Y5E6 MIR1302-5-201ENST00000408164 150 ntBASIC4.75□□□□□ -1.65
PCDHB3Q9Y5E6 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.75□□□□□ -1.65
PCDHB3Q9Y5E6 AL358232.1-201ENST00000448030 501 ntBASIC4.75□□□□□ -1.65
PCDHB3Q9Y5E6 DCLRE1CP1-201ENST00000454630 470 ntBASIC4.75□□□□□ -1.65
PCDHB3Q9Y5E6 RNU6-437P-201ENST00000459408 95 ntBASIC4.75□□□□□ -1.65
PCDHB3Q9Y5E6 RPS17P2-201ENST00000461663 408 ntBASIC4.75□□□□□ -1.65
PCDHB3Q9Y5E6 SRIP1-201ENST00000489235 288 ntBASIC4.75□□□□□ -1.65
PCDHB3Q9Y5E6 AC091868.1-201ENST00000508746 304 ntBASIC4.75□□□□□ -1.65
PCDHB3Q9Y5E6 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC4.75□□□□□ -1.65
PCDHB3Q9Y5E6 AC015726.2-201ENST00000620112 122 ntBASIC4.75□□□□□ -1.65
PCDHB3Q9Y5E6 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.75□□□□□ -1.65
PCDHB3Q9Y5E6 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
PCDHB3Q9Y5E6 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
PCDHB3Q9Y5E6 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
PCDHB3Q9Y5E6 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.74□□□□□ -1.65
PCDHB3Q9Y5E6 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.74□□□□□ -1.65
PCDHB3Q9Y5E6 RNU4-41P-201ENST00000364426 143 ntBASIC4.74□□□□□ -1.65
PCDHB3Q9Y5E6 RNVU1-6-201ENST00000364688 164 ntBASIC4.74□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms