Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 U3.3-201ENST00000362986 216 ntBASIC4.91□□□□□ -1.62
LHX6Q9UPM6 UBBP2-201ENST00000376781 231 ntBASIC4.91□□□□□ -1.62
LHX6Q9UPM6 MIR670-201ENST00000390142 98 ntBASIC4.91□□□□□ -1.62
LHX6Q9UPM6 RNA5SP354-201ENST00000391247 136 ntBASIC4.91□□□□□ -1.62
LHX6Q9UPM6 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC4.91□□□□□ -1.62
LHX6Q9UPM6 AL353689.1-201ENST00000438895 199 ntBASIC4.91□□□□□ -1.62
LHX6Q9UPM6 RPS29P20-201ENST00000489592 171 ntBASIC4.91□□□□□ -1.62
LHX6Q9UPM6 AC096725.1-201ENST00000514266 313 ntBASIC4.91□□□□□ -1.62
LHX6Q9UPM6 HSPE1P18-201ENST00000517602 280 ntBASIC4.91□□□□□ -1.62
LHX6Q9UPM6 MIR4298-201ENST00000584380 73 ntBASIC4.91□□□□□ -1.62
LHX6Q9UPM6 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC4.91□□□□□ -1.62
LHX6Q9UPM6 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
LHX6Q9UPM6 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
LHX6Q9UPM6 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC4.91□□□□□ -1.62
LHX6Q9UPM6 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
LHX6Q9UPM6 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
LHX6Q9UPM6 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
LHX6Q9UPM6 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
LHX6Q9UPM6 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
LHX6Q9UPM6 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
LHX6Q9UPM6 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
LHX6Q9UPM6 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
LHX6Q9UPM6 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC4.91□□□□□ -1.62
LHX6Q9UPM6 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC4.91□□□□□ -1.62
LHX6Q9UPM6 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
LHX6Q9UPM6 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC4.9□□□□□ -1.62
LHX6Q9UPM6 AC093591.2-201ENST00000565254 3843 ntBASIC4.9□□□□□ -1.62
LHX6Q9UPM6 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4.9□□□□□ -1.62
LHX6Q9UPM6 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.9□□□□□ -1.62
LHX6Q9UPM6 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC4.9□□□□□ -1.62
LHX6Q9UPM6 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC4.9□□□□□ -1.62
LHX6Q9UPM6 RNU6-1010P-201ENST00000362757 107 ntBASIC4.9□□□□□ -1.63
LHX6Q9UPM6 MIR3065-201ENST00000390137 79 ntBASIC4.9□□□□□ -1.63
LHX6Q9UPM6 PPIAP31-201ENST00000405422 495 ntBASIC4.9□□□□□ -1.63
LHX6Q9UPM6 MIR1912-201ENST00000410389 80 ntBASIC4.9□□□□□ -1.63
LHX6Q9UPM6 HMGN2P27-201ENST00000427352 270 ntBASIC4.9□□□□□ -1.63
LHX6Q9UPM6 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC4.9□□□□□ -1.63
LHX6Q9UPM6 AC097462.1-201ENST00000514125 324 ntBASIC4.9□□□□□ -1.63
LHX6Q9UPM6 RNU7-61P-201ENST00000515897 61 ntBASIC4.9□□□□□ -1.63
LHX6Q9UPM6 RN7SKP209-201ENST00000516888 304 ntBASIC4.9□□□□□ -1.63
LHX6Q9UPM6 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC4.9□□□□□ -1.63
LHX6Q9UPM6 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.63
LHX6Q9UPM6 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC4.9□□□□□ -1.63
LHX6Q9UPM6 SCARNA15-201ENST00000607520 4325 ntBASIC4.9□□□□□ -1.63
LHX6Q9UPM6 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.9□□□□□ -1.63
LHX6Q9UPM6 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
LHX6Q9UPM6 AL353796.1-201ENST00000561542 3241 ntBASIC4.9□□□□□ -1.63
LHX6Q9UPM6 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.63
LHX6Q9UPM6 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
LHX6Q9UPM6 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.9□□□□□ -1.63
LHX6Q9UPM6 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC4.9□□□□□ -1.63
LHX6Q9UPM6 AC010300.1-201ENST00000600671 5134 ntBASIC4.9□□□□□ -1.63
LHX6Q9UPM6 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
LHX6Q9UPM6 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC4.89□□□□□ -1.63
LHX6Q9UPM6 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
LHX6Q9UPM6 AC026523.2-201ENST00000625039 7739 ntBASIC4.89□□□□□ -1.63
LHX6Q9UPM6 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
LHX6Q9UPM6 Y_RNA.10-201ENST00000362371 110 ntBASIC4.89□□□□□ -1.63
LHX6Q9UPM6 RNA5SP387-201ENST00000364226 106 ntBASIC4.89□□□□□ -1.63
LHX6Q9UPM6 RNU6-117P-201ENST00000365415 107 ntBASIC4.89□□□□□ -1.63
LHX6Q9UPM6 RN7SKP267-201ENST00000410381 285 ntBASIC4.89□□□□□ -1.63
LHX6Q9UPM6 RNA5SP113-201ENST00000410486 84 ntBASIC4.89□□□□□ -1.63
LHX6Q9UPM6 GPS2P1-201ENST00000411761 986 ntBASIC4.89□□□□□ -1.63
LHX6Q9UPM6 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC4.89□□□□□ -1.63
LHX6Q9UPM6 RNA5SP373-201ENST00000517271 95 ntBASIC4.89□□□□□ -1.63
LHX6Q9UPM6 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC4.89□□□□□ -1.63
LHX6Q9UPM6 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC4.89□□□□□ -1.63
LHX6Q9UPM6 AL356218.2-201ENST00000605264 187 ntBASIC4.89□□□□□ -1.63
LHX6Q9UPM6 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC4.89□□□□□ -1.63
LHX6Q9UPM6 HOTTIP_4.1-201ENST00000618195 165 ntBASIC4.89□□□□□ -1.63
LHX6Q9UPM6 AP001005.3-201ENST00000622049 129 ntBASIC4.89□□□□□ -1.63
LHX6Q9UPM6 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
LHX6Q9UPM6 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
LHX6Q9UPM6 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
LHX6Q9UPM6 AC004944.1-201ENST00000517807 3059 ntBASIC4.88□□□□□ -1.63
LHX6Q9UPM6 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
LHX6Q9UPM6 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
LHX6Q9UPM6 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
LHX6Q9UPM6 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
LHX6Q9UPM6 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
LHX6Q9UPM6 AC016588.2-201ENST00000632484 3021 ntBASIC4.88□□□□□ -1.63
LHX6Q9UPM6 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
LHX6Q9UPM6 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
LHX6Q9UPM6 RNU6-486P-201ENST00000363116 107 ntBASIC4.88□□□□□ -1.63
LHX6Q9UPM6 MIR493-201ENST00000385254 89 ntBASIC4.88□□□□□ -1.63
LHX6Q9UPM6 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC4.88□□□□□ -1.63
LHX6Q9UPM6 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC4.88□□□□□ -1.63
LHX6Q9UPM6 SNORD125-201ENST00000459538 96 ntBASIC4.88□□□□□ -1.63
LHX6Q9UPM6 AC107626.1-201ENST00000471084 183 ntBASIC4.88□□□□□ -1.63
LHX6Q9UPM6 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC4.88□□□□□ -1.63
LHX6Q9UPM6 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC4.88□□□□□ -1.63
LHX6Q9UPM6 RPS15AP11-201ENST00000594193 385 ntBASIC4.88□□□□□ -1.63
LHX6Q9UPM6 RNU6-91P-201ENST00000607774 107 ntBASIC4.88□□□□□ -1.63
LHX6Q9UPM6 U7.3-201ENST00000616123 62 ntBASIC4.88□□□□□ -1.63
LHX6Q9UPM6 AL591926.8-201ENST00000616876 211 ntBASIC4.88□□□□□ -1.63
LHX6Q9UPM6 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
LHX6Q9UPM6 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
LHX6Q9UPM6 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
LHX6Q9UPM6 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
LHX6Q9UPM6 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms