Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 MIR487A-201ENST00000385009 80 ntBASIC3.3□□□□□ -1.88
PARPBPQ9NWS1 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
PARPBPQ9NWS1 SNORD78.2-201ENST00000391076 69 ntBASIC3.3□□□□□ -1.88
PARPBPQ9NWS1 RNA5SP31-201ENST00000411144 127 ntBASIC3.3□□□□□ -1.88
PARPBPQ9NWS1 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.3□□□□□ -1.88
PARPBPQ9NWS1 snoU13.4-201ENST00000458916 104 ntBASIC3.3□□□□□ -1.88
PARPBPQ9NWS1 RPL7P49-201ENST00000471402 708 ntBASIC3.3□□□□□ -1.88
PARPBPQ9NWS1 MED28P2-201ENST00000475771 317 ntBASIC3.3□□□□□ -1.88
PARPBPQ9NWS1 AKIRIN2P1-201ENST00000505898 352 ntBASIC3.3□□□□□ -1.88
PARPBPQ9NWS1 AC026784.1-201ENST00000507986 352 ntBASIC3.3□□□□□ -1.88
PARPBPQ9NWS1 SNORA31.8-201ENST00000516327 108 ntBASIC3.3□□□□□ -1.88
PARPBPQ9NWS1 AC022559.1-201ENST00000520905 205 ntBASIC3.3□□□□□ -1.88
PARPBPQ9NWS1 AC087441.2-201ENST00000529141 262 ntBASIC3.3□□□□□ -1.88
PARPBPQ9NWS1 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.3□□□□□ -1.88
PARPBPQ9NWS1 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC3.3□□□□□ -1.88
PARPBPQ9NWS1 RNVU1-4-201ENST00000612985 164 ntBASIC3.3□□□□□ -1.88
PARPBPQ9NWS1 AC112200.1-201ENST00000625015 234 ntBASIC3.3□□□□□ -1.88
PARPBPQ9NWS1 AP000553.6-201ENST00000641242 118 ntBASIC3.3□□□□□ -1.88
PARPBPQ9NWS1 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.3□□□□□ -1.88
PARPBPQ9NWS1 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.3□□□□□ -1.88
PARPBPQ9NWS1 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
PARPBPQ9NWS1 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.3□□□□□ -1.88
PARPBPQ9NWS1 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
PARPBPQ9NWS1 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
PARPBPQ9NWS1 AC007785.2-201ENST00000598627 1916 ntBASIC3.29□□□□□ -1.88
PARPBPQ9NWS1 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
PARPBPQ9NWS1 RNA5SP361-201ENST00000362686 118 ntBASIC3.29□□□□□ -1.88
PARPBPQ9NWS1 RNU6-682P-201ENST00000363843 106 ntBASIC3.29□□□□□ -1.88
PARPBPQ9NWS1 RNU4-9P-201ENST00000364951 139 ntBASIC3.29□□□□□ -1.88
PARPBPQ9NWS1 RNU6-290P-201ENST00000365212 101 ntBASIC3.29□□□□□ -1.88
PARPBPQ9NWS1 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.29□□□□□ -1.88
PARPBPQ9NWS1 RNU6-17P-201ENST00000384245 107 ntBASIC3.29□□□□□ -1.88
PARPBPQ9NWS1 RNU6-18P-201ENST00000384527 107 ntBASIC3.29□□□□□ -1.88
PARPBPQ9NWS1 BTF3L4P2-201ENST00000392798 346 ntBASIC3.29□□□□□ -1.88
PARPBPQ9NWS1 RNU4-30P-201ENST00000410245 143 ntBASIC3.29□□□□□ -1.88
PARPBPQ9NWS1 CRYBB2P1-203ENST00000415709 538 ntBASIC3.29□□□□□ -1.88
PARPBPQ9NWS1 COX6CP10-201ENST00000416832 224 ntBASIC3.29□□□□□ -1.88
PARPBPQ9NWS1 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC3.29□□□□□ -1.88
PARPBPQ9NWS1 AL356867.1-201ENST00000429623 299 ntBASIC3.29□□□□□ -1.88
PARPBPQ9NWS1 SNRPEP9-201ENST00000436794 238 ntBASIC3.29□□□□□ -1.88
PARPBPQ9NWS1 AP000870.1-201ENST00000472927 406 ntBASIC3.29□□□□□ -1.88
PARPBPQ9NWS1 AF186996.7-201ENST00000492781 209 ntBASIC3.29□□□□□ -1.88
PARPBPQ9NWS1 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC3.29□□□□□ -1.88
PARPBPQ9NWS1 SNORD116-28-201ENST00000516123 91 ntBASIC3.29□□□□□ -1.88
PARPBPQ9NWS1 Y_RNA.683-201ENST00000516508 93 ntBASIC3.29□□□□□ -1.88
PARPBPQ9NWS1 SNORA43.2-201ENST00000516652 128 ntBASIC3.29□□□□□ -1.88
PARPBPQ9NWS1 MIR2355-201ENST00000517199 87 ntBASIC3.29□□□□□ -1.88
PARPBPQ9NWS1 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC3.29□□□□□ -1.88
PARPBPQ9NWS1 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC3.29□□□□□ -1.88
PARPBPQ9NWS1 TRAV28-201ENST00000557548 323 ntBASIC3.29□□□□□ -1.88
PARPBPQ9NWS1 MIR4782-201ENST00000577987 79 ntBASIC3.29□□□□□ -1.88
PARPBPQ9NWS1 SNORA51-201ENST00000606420 132 ntBASIC3.29□□□□□ -1.88
PARPBPQ9NWS1 AP002826.1-201ENST00000608835 315 ntBASIC3.29□□□□□ -1.88
PARPBPQ9NWS1 CEP170P1-201ENST00000502249 4587 ntBASIC3.29□□□□□ -1.88
PARPBPQ9NWS1 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
PARPBPQ9NWS1 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
PARPBPQ9NWS1 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
PARPBPQ9NWS1 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
PARPBPQ9NWS1 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.29□□□□□ -1.88
PARPBPQ9NWS1 AL672296.1-201ENST00000427780 2158 ntBASIC3.28□□□□□ -1.88
PARPBPQ9NWS1 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
PARPBPQ9NWS1 RNU6-47P-201ENST00000383866 107 ntBASIC3.28□□□□□ -1.88
PARPBPQ9NWS1 RNU6-968P-201ENST00000384076 107 ntBASIC3.28□□□□□ -1.88
PARPBPQ9NWS1 Y_RNA.506-201ENST00000384494 102 ntBASIC3.28□□□□□ -1.88
PARPBPQ9NWS1 MIR32-201ENST00000384965 70 ntBASIC3.28□□□□□ -1.88
PARPBPQ9NWS1 RNA5SP213-201ENST00000391031 106 ntBASIC3.28□□□□□ -1.88
PARPBPQ9NWS1 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC3.28□□□□□ -1.88
PARPBPQ9NWS1 EIF1P2-201ENST00000428233 350 ntBASIC3.28□□□□□ -1.88
PARPBPQ9NWS1 AL445305.1-201ENST00000432577 575 ntBASIC3.28□□□□□ -1.88
PARPBPQ9NWS1 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.28□□□□□ -1.88
PARPBPQ9NWS1 AC016700.2-201ENST00000446011 156 ntBASIC3.28□□□□□ -1.88
PARPBPQ9NWS1 AL353705.4-201ENST00000449661 238 ntBASIC3.28□□□□□ -1.88
PARPBPQ9NWS1 U3.44-201ENST00000458938 192 ntBASIC3.28□□□□□ -1.88
PARPBPQ9NWS1 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC3.28□□□□□ -1.88
PARPBPQ9NWS1 RNA5SP208-201ENST00000516156 78 ntBASIC3.28□□□□□ -1.88
PARPBPQ9NWS1 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
PARPBPQ9NWS1 H3F3AP1-201ENST00000559984 334 ntBASIC3.28□□□□□ -1.88
PARPBPQ9NWS1 MIR3690-201ENST00000580266 75 ntBASIC3.28□□□□□ -1.88
PARPBPQ9NWS1 AC020895.1-201ENST00000595362 272 ntBASIC3.28□□□□□ -1.88
PARPBPQ9NWS1 RPL23AP88-201ENST00000605759 454 ntBASIC3.28□□□□□ -1.88
PARPBPQ9NWS1 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
PARPBPQ9NWS1 SCARNA4-201ENST00000629045 128 ntBASIC3.28□□□□□ -1.88
PARPBPQ9NWS1 SNORA50A-202ENST00000629536 136 ntBASIC3.28□□□□□ -1.88
PARPBPQ9NWS1 MIR7153-201ENST00000637758 57 ntBASIC3.28□□□□□ -1.88
PARPBPQ9NWS1 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.28□□□□□ -1.88
PARPBPQ9NWS1 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.28□□□□□ -1.88
PARPBPQ9NWS1 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
PARPBPQ9NWS1 ZNF826P-207ENST00000622273 1910 ntBASIC3.28□□□□□ -1.88
PARPBPQ9NWS1 AC135776.4-201ENST00000624300 1904 ntBASIC3.28□□□□□ -1.88
PARPBPQ9NWS1 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.28□□□□□ -1.88
PARPBPQ9NWS1 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.27□□□□□ -1.89
PARPBPQ9NWS1 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.27□□□□□ -1.89
PARPBPQ9NWS1 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
PARPBPQ9NWS1 AL353746.1-201ENST00000566293 6881 ntBASIC3.27□□□□□ -1.89
PARPBPQ9NWS1 AL079305.1-201ENST00000623159 3008 ntBASIC3.27□□□□□ -1.89
PARPBPQ9NWS1 AL359693.1-201ENST00000614959 2407 ntBASIC3.27□□□□□ -1.89
PARPBPQ9NWS1 RNU6-942P-201ENST00000363002 107 ntBASIC3.27□□□□□ -1.89
PARPBPQ9NWS1 RNU6-527P-201ENST00000363425 104 ntBASIC3.27□□□□□ -1.89
PARPBPQ9NWS1 RNU6-879P-201ENST00000364328 108 ntBASIC3.27□□□□□ -1.89
PARPBPQ9NWS1 RNU6-740P-201ENST00000364734 105 ntBASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 111.2 ms