Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 RN7SKP12-201ENST00000516275 143 ntBASIC4.43□□□□□ -1.7
COL25A1Q9BXS0 RNU6-412P-201ENST00000516434 106 ntBASIC4.43□□□□□ -1.7
COL25A1Q9BXS0 snoMBII-202.2-201ENST00000517263 86 ntBASIC4.43□□□□□ -1.7
COL25A1Q9BXS0 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC4.43□□□□□ -1.7
COL25A1Q9BXS0 AC015813.4-201ENST00000610469 179 ntBASIC4.43□□□□□ -1.7
COL25A1Q9BXS0 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
COL25A1Q9BXS0 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
COL25A1Q9BXS0 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
COL25A1Q9BXS0 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.42□□□□□ -1.7
COL25A1Q9BXS0 AL035425.3-201ENST00000564206 4996 ntBASIC4.42□□□□□ -1.7
COL25A1Q9BXS0 CPHL1P-201ENST00000461341 3407 ntBASIC4.42□□□□□ -1.7
COL25A1Q9BXS0 CROT-204ENST00000442291 1993 ntTSL 5 BASIC4.42□□□□□ -1.7
COL25A1Q9BXS0 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
COL25A1Q9BXS0 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
COL25A1Q9BXS0 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.42□□□□□ -1.7
COL25A1Q9BXS0 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
COL25A1Q9BXS0 RNU6-647P-201ENST00000364243 107 ntBASIC4.42□□□□□ -1.7
COL25A1Q9BXS0 Y_RNA.281-201ENST00000364774 94 ntBASIC4.42□□□□□ -1.7
COL25A1Q9BXS0 Y_RNA.368-201ENST00000365547 113 ntBASIC4.42□□□□□ -1.7
COL25A1Q9BXS0 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC4.42□□□□□ -1.7
COL25A1Q9BXS0 SNORD78.1-201ENST00000390866 65 ntBASIC4.42□□□□□ -1.7
COL25A1Q9BXS0 U3.32-201ENST00000408116 212 ntBASIC4.42□□□□□ -1.7
COL25A1Q9BXS0 RPS20P14-201ENST00000412545 360 ntBASIC4.42□□□□□ -1.7
COL25A1Q9BXS0 EDDM3CP-201ENST00000415977 425 ntBASIC4.42□□□□□ -1.7
COL25A1Q9BXS0 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC4.42□□□□□ -1.7
COL25A1Q9BXS0 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
COL25A1Q9BXS0 AL591473.1-201ENST00000464297 313 ntBASIC4.42□□□□□ -1.7
COL25A1Q9BXS0 RN7SL601P-201ENST00000471221 293 ntBASIC4.42□□□□□ -1.7
COL25A1Q9BXS0 RNU5F-2P-201ENST00000516066 82 ntBASIC4.42□□□□□ -1.7
COL25A1Q9BXS0 AP004607.1-201ENST00000524456 203 ntBASIC4.42□□□□□ -1.7
COL25A1Q9BXS0 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC4.42□□□□□ -1.7
COL25A1Q9BXS0 AC018630.3-201ENST00000542637 96 ntBASIC4.42□□□□□ -1.7
COL25A1Q9BXS0 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
COL25A1Q9BXS0 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
COL25A1Q9BXS0 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC4.42□□□□□ -1.7
COL25A1Q9BXS0 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.42□□□□□ -1.7
COL25A1Q9BXS0 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
COL25A1Q9BXS0 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
COL25A1Q9BXS0 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
COL25A1Q9BXS0 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
COL25A1Q9BXS0 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
COL25A1Q9BXS0 AC112198.2-201ENST00000426589 6996 ntBASIC4.41□□□□□ -1.7
COL25A1Q9BXS0 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC4.41□□□□□ -1.7
COL25A1Q9BXS0 RNU6-756P-201ENST00000383997 107 ntBASIC4.41□□□□□ -1.7
COL25A1Q9BXS0 RNY3P5-201ENST00000384127 102 ntBASIC4.41□□□□□ -1.7
COL25A1Q9BXS0 SNORA48.5-201ENST00000391143 135 ntBASIC4.41□□□□□ -1.7
COL25A1Q9BXS0 AL157831.1-201ENST00000426134 473 ntBASIC4.41□□□□□ -1.7
COL25A1Q9BXS0 RPL19P16-201ENST00000433839 588 ntBASIC4.41□□□□□ -1.7
COL25A1Q9BXS0 AC016632.1-201ENST00000503994 196 ntBASIC4.41□□□□□ -1.7
COL25A1Q9BXS0 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC4.41□□□□□ -1.7
COL25A1Q9BXS0 RNU6-513P-201ENST00000516104 104 ntBASIC4.41□□□□□ -1.7
COL25A1Q9BXS0 HSPE1P4-201ENST00000550617 308 ntBASIC4.41□□□□□ -1.7
COL25A1Q9BXS0 MIR4724-201ENST00000579485 89 ntBASIC4.41□□□□□ -1.7
COL25A1Q9BXS0 MIR378D2-201ENST00000580636 98 ntBASIC4.41□□□□□ -1.7
COL25A1Q9BXS0 MIR6891-201ENST00000618788 93 ntBASIC4.41□□□□□ -1.7
COL25A1Q9BXS0 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
COL25A1Q9BXS0 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
COL25A1Q9BXS0 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
COL25A1Q9BXS0 AL359693.1-201ENST00000614959 2407 ntBASIC4.41□□□□□ -1.7
COL25A1Q9BXS0 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC4.41□□□□□ -1.7
COL25A1Q9BXS0 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
COL25A1Q9BXS0 MAPK10-372ENST00000641954 3413 ntBASIC4.4□□□□□ -1.7
COL25A1Q9BXS0 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.4□□□□□ -1.7
COL25A1Q9BXS0 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
COL25A1Q9BXS0 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC4.4□□□□□ -1.7
COL25A1Q9BXS0 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.4□□□□□ -1.7
COL25A1Q9BXS0 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
COL25A1Q9BXS0 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
COL25A1Q9BXS0 RNU6-1107P-201ENST00000364817 104 ntBASIC4.4□□□□□ -1.71
COL25A1Q9BXS0 UBBP2-201ENST00000376781 231 ntBASIC4.4□□□□□ -1.71
COL25A1Q9BXS0 AL031003.1-201ENST00000404229 172 ntBASIC4.4□□□□□ -1.71
COL25A1Q9BXS0 RNU6-710P-201ENST00000410424 105 ntBASIC4.4□□□□□ -1.71
COL25A1Q9BXS0 RPS3AP1-201ENST00000413190 320 ntBASIC4.4□□□□□ -1.71
COL25A1Q9BXS0 RNU7-141P-201ENST00000459304 62 ntBASIC4.4□□□□□ -1.71
COL25A1Q9BXS0 AC106707.2-201ENST00000484182 374 ntBASIC4.4□□□□□ -1.71
COL25A1Q9BXS0 UBE2Q2P9-201ENST00000490086 202 ntBASIC4.4□□□□□ -1.71
COL25A1Q9BXS0 UBE2CP3-201ENST00000502715 450 ntBASIC4.4□□□□□ -1.71
COL25A1Q9BXS0 SCARNA15.2-201ENST00000516409 127 ntBASIC4.4□□□□□ -1.71
COL25A1Q9BXS0 RNU4ATAC17P-201ENST00000517272 120 ntBASIC4.4□□□□□ -1.71
COL25A1Q9BXS0 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC4.4□□□□□ -1.71
COL25A1Q9BXS0 AC025166.1-201ENST00000612411 163 ntBASIC4.4□□□□□ -1.71
COL25A1Q9BXS0 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC4.4□□□□□ -1.71
COL25A1Q9BXS0 MAPK10-320ENST00000641462 6696 ntBASIC4.4□□□□□ -1.71
COL25A1Q9BXS0 AC087190.4-201ENST00000574616 8334 ntBASIC4.4□□□□□ -1.71
COL25A1Q9BXS0 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
COL25A1Q9BXS0 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
COL25A1Q9BXS0 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC4.4□□□□□ -1.71
COL25A1Q9BXS0 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.71
COL25A1Q9BXS0 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
COL25A1Q9BXS0 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.4□□□□□ -1.71
COL25A1Q9BXS0 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
COL25A1Q9BXS0 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
COL25A1Q9BXS0 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
COL25A1Q9BXS0 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.39□□□□□ -1.71
COL25A1Q9BXS0 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
COL25A1Q9BXS0 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
COL25A1Q9BXS0 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
COL25A1Q9BXS0 SNORD115-30-201ENST00000364117 82 ntBASIC4.39□□□□□ -1.71
COL25A1Q9BXS0 Y_RNA.219-201ENST00000364232 113 ntBASIC4.39□□□□□ -1.71
COL25A1Q9BXS0 RNU1-140P-201ENST00000365040 165 ntBASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 203.4 ms