Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 RNU6-344P-201ENST00000516635 111 ntBASIC5□□□□□ -1.61
LRCH3Q96II8 RNU1-117P-201ENST00000517041 158 ntBASIC5□□□□□ -1.61
LRCH3Q96II8 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC5□□□□□ -1.61
LRCH3Q96II8 DLEU2_6.2-201ENST00000620994 136 ntBASIC5□□□□□ -1.61
LRCH3Q96II8 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
LRCH3Q96II8 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
LRCH3Q96II8 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC5□□□□□ -1.61
LRCH3Q96II8 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
LRCH3Q96II8 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
LRCH3Q96II8 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC5□□□□□ -1.61
LRCH3Q96II8 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
LRCH3Q96II8 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC5□□□□□ -1.61
LRCH3Q96II8 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5□□□□□ -1.61
LRCH3Q96II8 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC5□□□□□ -1.61
LRCH3Q96II8 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
LRCH3Q96II8 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
LRCH3Q96II8 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC4.99□□□□□ -1.61
LRCH3Q96II8 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.99□□□□□ -1.61
LRCH3Q96II8 MUC2-202ENST00000613187 4845 ntBASIC4.99□□□□□ -1.61
LRCH3Q96II8 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4.99□□□□□ -1.61
LRCH3Q96II8 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC4.99□□□□□ -1.61
LRCH3Q96II8 Y_RNA.219-201ENST00000364232 113 ntBASIC4.99□□□□□ -1.61
LRCH3Q96II8 RNU6-820P-201ENST00000384273 107 ntBASIC4.99□□□□□ -1.61
LRCH3Q96II8 Y_RNA.549-201ENST00000384657 102 ntBASIC4.99□□□□□ -1.61
LRCH3Q96II8 NDUFS5P4-201ENST00000412983 318 ntBASIC4.99□□□□□ -1.61
LRCH3Q96II8 AC005300.1-201ENST00000428401 373 ntBASIC4.99□□□□□ -1.61
LRCH3Q96II8 RPL37P4-201ENST00000448908 268 ntBASIC4.99□□□□□ -1.61
LRCH3Q96II8 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC4.99□□□□□ -1.61
LRCH3Q96II8 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC4.99□□□□□ -1.61
LRCH3Q96II8 AC010285.1-201ENST00000470580 392 ntBASIC4.99□□□□□ -1.61
LRCH3Q96II8 RN7SKP83-201ENST00000516512 178 ntBASIC4.99□□□□□ -1.61
LRCH3Q96II8 AC009163.5-201ENST00000575421 637 ntBASIC4.99□□□□□ -1.61
LRCH3Q96II8 AC090897.2-201ENST00000581715 130 ntBASIC4.99□□□□□ -1.61
LRCH3Q96II8 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC4.99□□□□□ -1.61
LRCH3Q96II8 AL022345.2-201ENST00000606307 135 ntBASIC4.99□□□□□ -1.61
LRCH3Q96II8 FTX_3.1-201ENST00000610451 147 ntBASIC4.99□□□□□ -1.61
LRCH3Q96II8 AP001005.3-201ENST00000622049 129 ntBASIC4.99□□□□□ -1.61
LRCH3Q96II8 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
LRCH3Q96II8 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
LRCH3Q96II8 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.99□□□□□ -1.61
LRCH3Q96II8 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
LRCH3Q96II8 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC4.99□□□□□ -1.61
LRCH3Q96II8 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
LRCH3Q96II8 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC4.99□□□□□ -1.61
LRCH3Q96II8 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
LRCH3Q96II8 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
LRCH3Q96II8 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
LRCH3Q96II8 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
LRCH3Q96II8 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC4.98□□□□□ -1.61
LRCH3Q96II8 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC4.98□□□□□ -1.61
LRCH3Q96II8 SNORA73.2-201ENST00000364946 201 ntBASIC4.98□□□□□ -1.61
LRCH3Q96II8 RNU6-1152P-201ENST00000384576 107 ntBASIC4.98□□□□□ -1.61
LRCH3Q96II8 MIR218-2-201ENST00000385006 110 ntBASIC4.98□□□□□ -1.61
LRCH3Q96II8 CBX3P9-201ENST00000402326 552 ntBASIC4.98□□□□□ -1.61
LRCH3Q96II8 MIR1263-201ENST00000408324 86 ntBASIC4.98□□□□□ -1.61
LRCH3Q96II8 RN7SKP101-201ENST00000411376 320 ntBASIC4.98□□□□□ -1.61
LRCH3Q96II8 RNU6ATAC17P-201ENST00000516074 71 ntBASIC4.98□□□□□ -1.61
LRCH3Q96II8 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC4.98□□□□□ -1.61
LRCH3Q96II8 AL160236.1-201ENST00000556317 195 ntBASIC4.98□□□□□ -1.61
LRCH3Q96II8 AC025281.1-201ENST00000567026 265 ntBASIC4.98□□□□□ -1.61
LRCH3Q96II8 AL137843.1-201ENST00000605078 385 ntBASIC4.98□□□□□ -1.61
LRCH3Q96II8 SNORA51-201ENST00000606420 132 ntBASIC4.98□□□□□ -1.61
LRCH3Q96II8 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC4.98□□□□□ -1.61
LRCH3Q96II8 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
LRCH3Q96II8 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
LRCH3Q96II8 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
LRCH3Q96II8 AL022322.2-201ENST00000624072 20397 ntBASIC4.98□□□□□ -1.61
LRCH3Q96II8 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.97□□□□□ -1.61
LRCH3Q96II8 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.97□□□□□ -1.61
LRCH3Q96II8 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
LRCH3Q96II8 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC4.97□□□□□ -1.61
LRCH3Q96II8 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC4.97□□□□□ -1.61
LRCH3Q96II8 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
LRCH3Q96II8 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
LRCH3Q96II8 RNA5SP124-201ENST00000362739 110 ntBASIC4.97□□□□□ -1.61
LRCH3Q96II8 MIR450A2-201ENST00000385022 100 ntBASIC4.97□□□□□ -1.61
LRCH3Q96II8 AC007738.1-201ENST00000413892 348 ntBASIC4.97□□□□□ -1.61
LRCH3Q96II8 HMGN2P30-201ENST00000423237 256 ntBASIC4.97□□□□□ -1.61
LRCH3Q96II8 NDUFS5P3-201ENST00000450668 321 ntBASIC4.97□□□□□ -1.61
LRCH3Q96II8 RNU6-1146P-201ENST00000516282 102 ntBASIC4.97□□□□□ -1.61
LRCH3Q96II8 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC4.97□□□□□ -1.61
LRCH3Q96II8 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.97□□□□□ -1.61
LRCH3Q96II8 Z95331.1-201ENST00000623075 23112 ntBASIC4.97□□□□□ -1.61
LRCH3Q96II8 AL513302.2-201ENST00000562313 1842 ntBASIC4.97□□□□□ -1.61
LRCH3Q96II8 SMG1P4-204ENST00000523028 4131 ntBASIC4.97□□□□□ -1.61
LRCH3Q96II8 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
LRCH3Q96II8 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
LRCH3Q96II8 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.97□□□□□ -1.61
LRCH3Q96II8 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
LRCH3Q96II8 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
LRCH3Q96II8 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
LRCH3Q96II8 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
LRCH3Q96II8 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC4.96□□□□□ -1.62
LRCH3Q96II8 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC4.96□□□□□ -1.62
LRCH3Q96II8 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
LRCH3Q96II8 PCAT14-202ENST00000627127 3935 ntBASIC4.96□□□□□ -1.62
LRCH3Q96II8 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
LRCH3Q96II8 Y_RNA.220-201ENST00000364244 109 ntBASIC4.96□□□□□ -1.62
LRCH3Q96II8 RNU6-1280P-201ENST00000365211 107 ntBASIC4.96□□□□□ -1.62
LRCH3Q96II8 RNU6-622P-201ENST00000384272 103 ntBASIC4.96□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 110.3 ms