Protein–RNA interactions for Protein: Q8NCU1

CCDC197, Putative uncharacterized protein CCDC197, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197Q8NCU1 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
CCDC197Q8NCU1 RNU6-314P-201ENST00000516574 104 ntBASIC2.11□□□□□ -2.07
CCDC197Q8NCU1 SNORD60.2-201ENST00000516883 86 ntBASIC2.11□□□□□ -2.07
CCDC197Q8NCU1 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC2.11□□□□□ -2.07
CCDC197Q8NCU1 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC2.11□□□□□ -2.07
CCDC197Q8NCU1 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC2.11□□□□□ -2.07
CCDC197Q8NCU1 AC016957.1-201ENST00000534895 309 ntBASIC2.11□□□□□ -2.07
CCDC197Q8NCU1 AL157687.1-201ENST00000554853 619 ntBASIC2.11□□□□□ -2.07
CCDC197Q8NCU1 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC2.11□□□□□ -2.07
CCDC197Q8NCU1 TPRKBP2-201ENST00000565969 475 ntBASIC2.11□□□□□ -2.07
CCDC197Q8NCU1 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.11□□□□□ -2.07
CCDC197Q8NCU1 AL162413.1-201ENST00000603198 110 ntBASIC2.11□□□□□ -2.07
CCDC197Q8NCU1 AC092807.2-201ENST00000609367 243 ntBASIC2.11□□□□□ -2.07
CCDC197Q8NCU1 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.11□□□□□ -2.07
CCDC197Q8NCU1 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.1□□□□□ -2.07
CCDC197Q8NCU1 RNU6-1285P-201ENST00000363480 105 ntBASIC2.1□□□□□ -2.07
CCDC197Q8NCU1 Y_RNA.231-201ENST00000364358 102 ntBASIC2.1□□□□□ -2.07
CCDC197Q8NCU1 RNU6-522P-201ENST00000364497 107 ntBASIC2.1□□□□□ -2.07
CCDC197Q8NCU1 RNU6-827P-201ENST00000365553 106 ntBASIC2.1□□□□□ -2.07
CCDC197Q8NCU1 RNU1-148P-201ENST00000384472 162 ntBASIC2.1□□□□□ -2.07
CCDC197Q8NCU1 RNU6-692P-201ENST00000384496 107 ntBASIC2.1□□□□□ -2.07
CCDC197Q8NCU1 RNU6-1222P-201ENST00000384615 107 ntBASIC2.1□□□□□ -2.07
CCDC197Q8NCU1 AL591034.2-201ENST00000402839 359 ntBASIC2.1□□□□□ -2.07
CCDC197Q8NCU1 SNORD23.1-201ENST00000408212 104 ntBASIC2.1□□□□□ -2.07
CCDC197Q8NCU1 RNU2-52P-201ENST00000410680 190 ntBASIC2.1□□□□□ -2.07
CCDC197Q8NCU1 RNU6-293P-201ENST00000411259 106 ntBASIC2.1□□□□□ -2.07
CCDC197Q8NCU1 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.1□□□□□ -2.07
CCDC197Q8NCU1 YME1L1P1-201ENST00000429435 297 ntBASIC2.1□□□□□ -2.07
CCDC197Q8NCU1 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC2.1□□□□□ -2.07
CCDC197Q8NCU1 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC2.1□□□□□ -2.07
CCDC197Q8NCU1 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC2.1□□□□□ -2.07
CCDC197Q8NCU1 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC2.1□□□□□ -2.07
CCDC197Q8NCU1 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC2.1□□□□□ -2.07
CCDC197Q8NCU1 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.1□□□□□ -2.07
CCDC197Q8NCU1 RPL21P99-201ENST00000480369 423 ntBASIC2.1□□□□□ -2.07
CCDC197Q8NCU1 RPL38P4-201ENST00000502376 214 ntBASIC2.1□□□□□ -2.07
CCDC197Q8NCU1 AC234781.5-201ENST00000508429 271 ntBASIC2.1□□□□□ -2.07
CCDC197Q8NCU1 RNU6-1069P-201ENST00000516612 133 ntBASIC2.1□□□□□ -2.07
CCDC197Q8NCU1 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC2.1□□□□□ -2.07
CCDC197Q8NCU1 APAF1-207ENST00000547743 651 ntTSL 3 BASIC2.1□□□□□ -2.07
CCDC197Q8NCU1 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.1□□□□□ -2.07
CCDC197Q8NCU1 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.1□□□□□ -2.07
CCDC197Q8NCU1 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC2.1□□□□□ -2.07
CCDC197Q8NCU1 AL355297.2-201ENST00000604792 129 ntBASIC2.1□□□□□ -2.07
CCDC197Q8NCU1 AC008121.3-201ENST00000618726 433 ntBASIC2.1□□□□□ -2.07
CCDC197Q8NCU1 MIR1321-201ENST00000637766 79 ntBASIC2.1□□□□□ -2.07
CCDC197Q8NCU1 AC068137.4-201ENST00000638485 296 ntBASIC2.1□□□□□ -2.07
CCDC197Q8NCU1 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
CCDC197Q8NCU1 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.09□□□□□ -2.07
CCDC197Q8NCU1 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
CCDC197Q8NCU1 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
CCDC197Q8NCU1 MIR670-201ENST00000390142 98 ntBASIC2.09□□□□□ -2.07
CCDC197Q8NCU1 AL590002.1-201ENST00000406554 418 ntBASIC2.09□□□□□ -2.07
CCDC197Q8NCU1 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC2.09□□□□□ -2.07
CCDC197Q8NCU1 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.09□□□□□ -2.07
CCDC197Q8NCU1 ARL5AP1-201ENST00000418991 388 ntBASIC2.09□□□□□ -2.07
CCDC197Q8NCU1 SNAP23P1-201ENST00000433229 246 ntBASIC2.09□□□□□ -2.07
CCDC197Q8NCU1 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC2.09□□□□□ -2.07
CCDC197Q8NCU1 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.09□□□□□ -2.07
CCDC197Q8NCU1 RPL7P49-201ENST00000471402 708 ntBASIC2.09□□□□□ -2.07
CCDC197Q8NCU1 RPL30P1-201ENST00000488676 339 ntBASIC2.09□□□□□ -2.07
CCDC197Q8NCU1 CKS1BP2-201ENST00000497342 240 ntBASIC2.09□□□□□ -2.07
CCDC197Q8NCU1 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC2.09□□□□□ -2.07
CCDC197Q8NCU1 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.09□□□□□ -2.07
CCDC197Q8NCU1 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC2.09□□□□□ -2.07
CCDC197Q8NCU1 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC2.09□□□□□ -2.07
CCDC197Q8NCU1 AC103996.1-201ENST00000555468 102 ntBASIC2.09□□□□□ -2.07
CCDC197Q8NCU1 MIR3944-201ENST00000581277 108 ntBASIC2.09□□□□□ -2.07
CCDC197Q8NCU1 AC107304.1-201ENST00000604229 296 ntBASIC2.09□□□□□ -2.07
CCDC197Q8NCU1 AC012557.2-201ENST00000605919 418 ntBASIC2.09□□□□□ -2.07
CCDC197Q8NCU1 RNU6-89P-201ENST00000606519 100 ntBASIC2.09□□□□□ -2.07
CCDC197Q8NCU1 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC2.09□□□□□ -2.07
CCDC197Q8NCU1 MIR6132-201ENST00000622083 109 ntBASIC2.09□□□□□ -2.07
CCDC197Q8NCU1 FER-210ENST00000628534 558 ntTSL 5 BASIC2.09□□□□□ -2.07
CCDC197Q8NCU1 AC241585.2-209ENST00000638217 143 ntBASIC2.09□□□□□ -2.07
CCDC197Q8NCU1 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.09□□□□□ -2.08
CCDC197Q8NCU1 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.08
CCDC197Q8NCU1 OR4G1P-203ENST00000641984 1631 ntBASIC2.09□□□□□ -2.08
CCDC197Q8NCU1 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
CCDC197Q8NCU1 RNU6-451P-201ENST00000362921 107 ntBASIC2.08□□□□□ -2.08
CCDC197Q8NCU1 RNU1-23P-201ENST00000363361 144 ntBASIC2.08□□□□□ -2.08
CCDC197Q8NCU1 Y_RNA.516-201ENST00000384541 124 ntBASIC2.08□□□□□ -2.08
CCDC197Q8NCU1 MIR34B-201ENST00000385076 84 ntBASIC2.08□□□□□ -2.08
CCDC197Q8NCU1 MIR221-201ENST00000385135 110 ntBASIC2.08□□□□□ -2.08
CCDC197Q8NCU1 SNORD73A-201ENST00000386062 65 ntBASIC2.08□□□□□ -2.08
CCDC197Q8NCU1 AL353752.1-201ENST00000454946 260 ntBASIC2.08□□□□□ -2.08
CCDC197Q8NCU1 AC018868.1-201ENST00000491307 315 ntBASIC2.08□□□□□ -2.08
CCDC197Q8NCU1 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC2.08□□□□□ -2.08
CCDC197Q8NCU1 AK3P2-201ENST00000507976 429 ntBASIC2.08□□□□□ -2.08
CCDC197Q8NCU1 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.08□□□□□ -2.08
CCDC197Q8NCU1 RNA5SP200-201ENST00000516360 103 ntBASIC2.08□□□□□ -2.08
CCDC197Q8NCU1 SNORA67.7-201ENST00000516664 135 ntBASIC2.08□□□□□ -2.08
CCDC197Q8NCU1 RNU6-586P-201ENST00000517265 104 ntBASIC2.08□□□□□ -2.08
CCDC197Q8NCU1 AP005597.4-201ENST00000526762 229 ntBASIC2.08□□□□□ -2.08
CCDC197Q8NCU1 MIR6075-201ENST00000620782 95 ntBASIC2.08□□□□□ -2.08
CCDC197Q8NCU1 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC2.08□□□□□ -2.08
CCDC197Q8NCU1 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.08□□□□□ -2.08
CCDC197Q8NCU1 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC2.08□□□□□ -2.08
CCDC197Q8NCU1 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.07□□□□□ -2.08
CCDC197Q8NCU1 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.07□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 129.9 ms