Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.6□□□□□ -1.83
SYNPOQ8N3V7 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
SYNPOQ8N3V7 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
SYNPOQ8N3V7 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
SYNPOQ8N3V7 Z75746.1-201ENST00000440243 2080 ntBASIC3.6□□□□□ -1.83
SYNPOQ8N3V7 Y_RNA.252-201ENST00000364556 101 ntBASIC3.6□□□□□ -1.83
SYNPOQ8N3V7 Y_RNA.364-201ENST00000365532 101 ntBASIC3.6□□□□□ -1.83
SYNPOQ8N3V7 SNORA29-201ENST00000384183 140 ntBASIC3.6□□□□□ -1.83
SYNPOQ8N3V7 SNORD17-201ENST00000390930 237 ntBASIC3.6□□□□□ -1.83
SYNPOQ8N3V7 U3.26-201ENST00000391236 204 ntBASIC3.6□□□□□ -1.83
SYNPOQ8N3V7 SAR1AP2-201ENST00000392696 594 ntBASIC3.6□□□□□ -1.83
SYNPOQ8N3V7 RPL23AP95-201ENST00000426806 265 ntBASIC3.6□□□□□ -1.83
SYNPOQ8N3V7 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.6□□□□□ -1.83
SYNPOQ8N3V7 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC3.6□□□□□ -1.83
SYNPOQ8N3V7 RPL23AP75-201ENST00000491601 451 ntBASIC3.6□□□□□ -1.83
SYNPOQ8N3V7 RNU6-327P-201ENST00000516270 127 ntBASIC3.6□□□□□ -1.83
SYNPOQ8N3V7 RNU6-1045P-201ENST00000516321 107 ntBASIC3.6□□□□□ -1.83
SYNPOQ8N3V7 SNORA70.18-201ENST00000516696 98 ntBASIC3.6□□□□□ -1.83
SYNPOQ8N3V7 RNU6-579P-201ENST00000516879 102 ntBASIC3.6□□□□□ -1.83
SYNPOQ8N3V7 Y_RNA.706-201ENST00000516933 99 ntBASIC3.6□□□□□ -1.83
SYNPOQ8N3V7 AC115990.1-201ENST00000526957 301 ntBASIC3.6□□□□□ -1.83
SYNPOQ8N3V7 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.6□□□□□ -1.83
SYNPOQ8N3V7 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC3.6□□□□□ -1.83
SYNPOQ8N3V7 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.6□□□□□ -1.83
SYNPOQ8N3V7 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
SYNPOQ8N3V7 AL035425.3-201ENST00000564206 4996 ntBASIC3.6□□□□□ -1.83
SYNPOQ8N3V7 MFSD8-236ENST00000641509 4050 ntBASIC3.6□□□□□ -1.83
SYNPOQ8N3V7 HSPA8P1-201ENST00000425843 1833 ntBASIC3.6□□□□□ -1.83
SYNPOQ8N3V7 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
SYNPOQ8N3V7 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC3.59□□□□□ -1.83
SYNPOQ8N3V7 AC093908.1-201ENST00000623125 8092 ntBASIC3.59□□□□□ -1.83
SYNPOQ8N3V7 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.59□□□□□ -1.83
SYNPOQ8N3V7 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC3.59□□□□□ -1.83
SYNPOQ8N3V7 RNU4-56P-201ENST00000364700 142 ntBASIC3.59□□□□□ -1.83
SYNPOQ8N3V7 RNU4-9P-201ENST00000364951 139 ntBASIC3.59□□□□□ -1.83
SYNPOQ8N3V7 RNU6-1083P-201ENST00000384022 107 ntBASIC3.59□□□□□ -1.83
SYNPOQ8N3V7 MIR32-201ENST00000384965 70 ntBASIC3.59□□□□□ -1.83
SYNPOQ8N3V7 RHEBP3-201ENST00000411920 351 ntBASIC3.59□□□□□ -1.83
SYNPOQ8N3V7 MCFD2P1-201ENST00000417812 300 ntBASIC3.59□□□□□ -1.83
SYNPOQ8N3V7 OR2AQ1P-201ENST00000451972 200 ntBASIC3.59□□□□□ -1.83
SYNPOQ8N3V7 AC090525.1-201ENST00000479116 478 ntBASIC3.59□□□□□ -1.83
SYNPOQ8N3V7 AC025518.1-201ENST00000479856 347 ntBASIC3.59□□□□□ -1.83
SYNPOQ8N3V7 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
SYNPOQ8N3V7 AC006504.6-201ENST00000590142 199 ntBASIC3.59□□□□□ -1.83
SYNPOQ8N3V7 SNORA43.4-201ENST00000629559 138 ntBASIC3.59□□□□□ -1.83
SYNPOQ8N3V7 SNORD98-201ENST00000636377 67 ntBASIC3.59□□□□□ -1.83
SYNPOQ8N3V7 MIR7515-201ENST00000637837 67 ntBASIC3.59□□□□□ -1.83
SYNPOQ8N3V7 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
SYNPOQ8N3V7 AC006504.1-201ENST00000562493 3666 ntBASIC3.59□□□□□ -1.84
SYNPOQ8N3V7 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.59□□□□□ -1.84
SYNPOQ8N3V7 GABRG2-229ENST00000641017 3628 ntBASIC3.58□□□□□ -1.84
SYNPOQ8N3V7 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC3.58□□□□□ -1.84
SYNPOQ8N3V7 AC092268.1-201ENST00000342691 405 ntBASIC3.58□□□□□ -1.84
SYNPOQ8N3V7 Y_RNA.39-201ENST00000362620 98 ntBASIC3.58□□□□□ -1.84
SYNPOQ8N3V7 SNORD21-201ENST00000383953 95 ntBASIC3.58□□□□□ -1.84
SYNPOQ8N3V7 RNY1P14-201ENST00000384426 108 ntBASIC3.58□□□□□ -1.84
SYNPOQ8N3V7 Y_RNA.496-201ENST00000384444 101 ntBASIC3.58□□□□□ -1.84
SYNPOQ8N3V7 MIR128-1-201ENST00000384921 82 ntBASIC3.58□□□□□ -1.84
SYNPOQ8N3V7 RN7SKP61-201ENST00000410642 295 ntBASIC3.58□□□□□ -1.84
SYNPOQ8N3V7 AC097463.2-201ENST00000421074 142 ntBASIC3.58□□□□□ -1.84
SYNPOQ8N3V7 AL358453.1-201ENST00000422522 250 ntBASIC3.58□□□□□ -1.84
SYNPOQ8N3V7 AC018865.2-201ENST00000423631 129 ntBASIC3.58□□□□□ -1.84
SYNPOQ8N3V7 AC078809.1-201ENST00000427601 140 ntBASIC3.58□□□□□ -1.84
SYNPOQ8N3V7 AC006028.1-201ENST00000438379 402 ntBASIC3.58□□□□□ -1.84
SYNPOQ8N3V7 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC3.58□□□□□ -1.84
SYNPOQ8N3V7 snoU13.6-201ENST00000458785 104 ntBASIC3.58□□□□□ -1.84
SYNPOQ8N3V7 snoU13.30-201ENST00000458951 104 ntBASIC3.58□□□□□ -1.84
SYNPOQ8N3V7 AC087477.1-201ENST00000465747 340 ntBASIC3.58□□□□□ -1.84
SYNPOQ8N3V7 AIG1P1-201ENST00000503376 148 ntBASIC3.58□□□□□ -1.84
SYNPOQ8N3V7 SNORA31.16-201ENST00000516773 139 ntBASIC3.58□□□□□ -1.84
SYNPOQ8N3V7 RNU7-4P-201ENST00000516961 62 ntBASIC3.58□□□□□ -1.84
SYNPOQ8N3V7 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC3.58□□□□□ -1.84
SYNPOQ8N3V7 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.58□□□□□ -1.84
SYNPOQ8N3V7 AC023442.1-201ENST00000531247 422 ntBASIC3.58□□□□□ -1.84
SYNPOQ8N3V7 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.58□□□□□ -1.84
SYNPOQ8N3V7 HSBP1P1-201ENST00000555205 166 ntBASIC3.58□□□□□ -1.84
SYNPOQ8N3V7 AC021231.3-201ENST00000558497 370 ntBASIC3.58□□□□□ -1.84
SYNPOQ8N3V7 AC100812.1-201ENST00000607622 580 ntBASIC3.58□□□□□ -1.84
SYNPOQ8N3V7 MIR7112-201ENST00000616126 65 ntBASIC3.58□□□□□ -1.84
SYNPOQ8N3V7 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.58□□□□□ -1.84
SYNPOQ8N3V7 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
SYNPOQ8N3V7 ZNF72P-201ENST00000425869 1908 ntBASIC3.58□□□□□ -1.84
SYNPOQ8N3V7 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
SYNPOQ8N3V7 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
SYNPOQ8N3V7 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
SYNPOQ8N3V7 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
SYNPOQ8N3V7 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.57□□□□□ -1.84
SYNPOQ8N3V7 RNU6-1010P-201ENST00000362757 107 ntBASIC3.57□□□□□ -1.84
SYNPOQ8N3V7 Y_RNA.148-201ENST00000363557 117 ntBASIC3.57□□□□□ -1.84
SYNPOQ8N3V7 SNORA33.2-201ENST00000365413 134 ntBASIC3.57□□□□□ -1.84
SYNPOQ8N3V7 RNU6-738P-201ENST00000384531 106 ntBASIC3.57□□□□□ -1.84
SYNPOQ8N3V7 MIR186-201ENST00000384988 86 ntBASIC3.57□□□□□ -1.84
SYNPOQ8N3V7 SNORA12.2-201ENST00000391040 156 ntBASIC3.57□□□□□ -1.84
SYNPOQ8N3V7 SNORA48.5-201ENST00000391143 135 ntBASIC3.57□□□□□ -1.84
SYNPOQ8N3V7 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.57□□□□□ -1.84
SYNPOQ8N3V7 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC3.57□□□□□ -1.84
SYNPOQ8N3V7 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.57□□□□□ -1.84
SYNPOQ8N3V7 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC3.57□□□□□ -1.84
SYNPOQ8N3V7 SNORA25.10-201ENST00000515926 124 ntBASIC3.57□□□□□ -1.84
SYNPOQ8N3V7 RNA5SP112-201ENST00000515937 99 ntBASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms