Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 HMGB1P22-201ENST00000505315 124 ntBASIC3.28□□□□□ -1.88
VRK3Q8IV63 AK3P2-201ENST00000507976 429 ntBASIC3.28□□□□□ -1.88
VRK3Q8IV63 AC010265.1-201ENST00000513509 211 ntBASIC3.28□□□□□ -1.88
VRK3Q8IV63 RNU6-1012P-201ENST00000516606 109 ntBASIC3.28□□□□□ -1.88
VRK3Q8IV63 AC022868.1-201ENST00000517767 391 ntBASIC3.28□□□□□ -1.88
VRK3Q8IV63 AC093331.1-201ENST00000521474 169 ntBASIC3.28□□□□□ -1.88
VRK3Q8IV63 AC010186.2-204ENST00000537668 439 ntBASIC3.28□□□□□ -1.88
VRK3Q8IV63 HMGB1P14-201ENST00000557424 591 ntBASIC3.28□□□□□ -1.88
VRK3Q8IV63 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC3.28□□□□□ -1.88
VRK3Q8IV63 U4.7-201ENST00000638126 106 ntBASIC3.28□□□□□ -1.88
VRK3Q8IV63 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.88
VRK3Q8IV63 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC3.28□□□□□ -1.88
VRK3Q8IV63 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.28□□□□□ -1.88
VRK3Q8IV63 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.28□□□□□ -1.89
VRK3Q8IV63 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
VRK3Q8IV63 USP8P1-201ENST00000494673 3183 ntBASIC3.27□□□□□ -1.89
VRK3Q8IV63 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.27□□□□□ -1.89
VRK3Q8IV63 AC004925.1-201ENST00000624256 2706 ntBASIC3.27□□□□□ -1.89
VRK3Q8IV63 Y_RNA.16-201ENST00000362421 102 ntBASIC3.27□□□□□ -1.89
VRK3Q8IV63 RNU6-1266P-201ENST00000362794 105 ntBASIC3.27□□□□□ -1.89
VRK3Q8IV63 RNU6-428P-201ENST00000362942 107 ntBASIC3.27□□□□□ -1.89
VRK3Q8IV63 Y_RNA.143-201ENST00000363520 106 ntBASIC3.27□□□□□ -1.89
VRK3Q8IV63 Y_RNA.245-201ENST00000364493 95 ntBASIC3.27□□□□□ -1.89
VRK3Q8IV63 RNU6-166P-201ENST00000384371 107 ntBASIC3.27□□□□□ -1.89
VRK3Q8IV63 AL079342.1-201ENST00000401460 267 ntBASIC3.27□□□□□ -1.89
VRK3Q8IV63 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC3.27□□□□□ -1.89
VRK3Q8IV63 YME1L1P1-201ENST00000429435 297 ntBASIC3.27□□□□□ -1.89
VRK3Q8IV63 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.27□□□□□ -1.89
VRK3Q8IV63 U8.22-201ENST00000459141 133 ntBASIC3.27□□□□□ -1.89
VRK3Q8IV63 RPL21P10-201ENST00000463521 490 ntBASIC3.27□□□□□ -1.89
VRK3Q8IV63 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.27□□□□□ -1.89
VRK3Q8IV63 RNU7-175P-201ENST00000515915 61 ntBASIC3.27□□□□□ -1.89
VRK3Q8IV63 SNORA31.20-201ENST00000517111 133 ntBASIC3.27□□□□□ -1.89
VRK3Q8IV63 CBX3P4-201ENST00000538909 354 ntBASIC3.27□□□□□ -1.89
VRK3Q8IV63 AC011602.1-201ENST00000546484 331 ntBASIC3.27□□□□□ -1.89
VRK3Q8IV63 AC004024.1-201ENST00000549244 247 ntBASIC3.27□□□□□ -1.89
VRK3Q8IV63 MIR4643-201ENST00000577473 78 ntBASIC3.27□□□□□ -1.89
VRK3Q8IV63 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC3.27□□□□□ -1.89
VRK3Q8IV63 AC060766.3-201ENST00000591442 263 ntBASIC3.27□□□□□ -1.89
VRK3Q8IV63 RPL23AP78-201ENST00000599928 470 ntBASIC3.27□□□□□ -1.89
VRK3Q8IV63 AL162713.1-201ENST00000604480 262 ntBASIC3.27□□□□□ -1.89
VRK3Q8IV63 AC240442.1-201ENST00000616055 283 ntBASIC3.27□□□□□ -1.89
VRK3Q8IV63 AC127459.3-201ENST00000624328 466 ntBASIC3.27□□□□□ -1.89
VRK3Q8IV63 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
VRK3Q8IV63 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
VRK3Q8IV63 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
VRK3Q8IV63 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC3.27□□□□□ -1.89
VRK3Q8IV63 ZNF826P-207ENST00000622273 1910 ntBASIC3.27□□□□□ -1.89
VRK3Q8IV63 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
VRK3Q8IV63 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.26□□□□□ -1.89
VRK3Q8IV63 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.26□□□□□ -1.89
VRK3Q8IV63 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
VRK3Q8IV63 SNORA19-201ENST00000384737 128 ntBASIC3.26□□□□□ -1.89
VRK3Q8IV63 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
VRK3Q8IV63 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
VRK3Q8IV63 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.26□□□□□ -1.89
VRK3Q8IV63 RPL23AP67-201ENST00000465341 474 ntBASIC3.26□□□□□ -1.89
VRK3Q8IV63 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC3.26□□□□□ -1.89
VRK3Q8IV63 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC3.26□□□□□ -1.89
VRK3Q8IV63 ANXA2P1-201ENST00000505539 926 ntBASIC3.26□□□□□ -1.89
VRK3Q8IV63 RNU6-377P-201ENST00000515965 102 ntBASIC3.26□□□□□ -1.89
VRK3Q8IV63 RNU6-496P-201ENST00000516145 99 ntBASIC3.26□□□□□ -1.89
VRK3Q8IV63 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.26□□□□□ -1.89
VRK3Q8IV63 MIR3910-1-201ENST00000580936 111 ntBASIC3.26□□□□□ -1.89
VRK3Q8IV63 MIR4276-201ENST00000584832 70 ntBASIC3.26□□□□□ -1.89
VRK3Q8IV63 AC008739.3-201ENST00000603262 127 ntBASIC3.26□□□□□ -1.89
VRK3Q8IV63 B3GNTL1P2-201ENST00000603673 288 ntBASIC3.26□□□□□ -1.89
VRK3Q8IV63 Y_RNA.772-201ENST00000606692 102 ntBASIC3.26□□□□□ -1.89
VRK3Q8IV63 RMST_8.1-201ENST00000610287 165 ntBASIC3.26□□□□□ -1.89
VRK3Q8IV63 MIR7975-201ENST00000619350 68 ntBASIC3.26□□□□□ -1.89
VRK3Q8IV63 MIR6075-201ENST00000620782 95 ntBASIC3.26□□□□□ -1.89
VRK3Q8IV63 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
VRK3Q8IV63 AC007785.2-201ENST00000598627 1916 ntBASIC3.26□□□□□ -1.89
VRK3Q8IV63 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
VRK3Q8IV63 AC058791.1-201ENST00000608412 3198 ntBASIC3.26□□□□□ -1.89
VRK3Q8IV63 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.26□□□□□ -1.89
VRK3Q8IV63 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
VRK3Q8IV63 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.25□□□□□ -1.89
VRK3Q8IV63 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC3.25□□□□□ -1.89
VRK3Q8IV63 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.25□□□□□ -1.89
VRK3Q8IV63 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
VRK3Q8IV63 RNU6-336P-201ENST00000364891 107 ntBASIC3.25□□□□□ -1.89
VRK3Q8IV63 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.25□□□□□ -1.89
VRK3Q8IV63 MIR34A-201ENST00000385130 110 ntBASIC3.25□□□□□ -1.89
VRK3Q8IV63 MIR23A-201ENST00000385245 73 ntBASIC3.25□□□□□ -1.89
VRK3Q8IV63 MIR1298-201ENST00000408783 112 ntBASIC3.25□□□□□ -1.89
VRK3Q8IV63 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.25□□□□□ -1.89
VRK3Q8IV63 AL358232.1-201ENST00000448030 501 ntBASIC3.25□□□□□ -1.89
VRK3Q8IV63 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC3.25□□□□□ -1.89
VRK3Q8IV63 Y_RNA.644-201ENST00000459006 113 ntBASIC3.25□□□□□ -1.89
VRK3Q8IV63 RNU7-120P-201ENST00000459334 63 ntBASIC3.25□□□□□ -1.89
VRK3Q8IV63 AC034236.1-201ENST00000469891 373 ntBASIC3.25□□□□□ -1.89
VRK3Q8IV63 AC139453.3-201ENST00000493276 369 ntBASIC3.25□□□□□ -1.89
VRK3Q8IV63 MLLT10P2-201ENST00000506434 249 ntBASIC3.25□□□□□ -1.89
VRK3Q8IV63 Y_RNA.674-201ENST00000516362 113 ntBASIC3.25□□□□□ -1.89
VRK3Q8IV63 Y_RNA.706-201ENST00000516933 99 ntBASIC3.25□□□□□ -1.89
VRK3Q8IV63 RNU6-255P-201ENST00000516957 105 ntBASIC3.25□□□□□ -1.89
VRK3Q8IV63 SNORA31.19-201ENST00000517079 126 ntBASIC3.25□□□□□ -1.89
VRK3Q8IV63 AP004371.1-201ENST00000525240 214 ntBASIC3.25□□□□□ -1.89
VRK3Q8IV63 CASP1P1-201ENST00000526345 212 ntBASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 158.2 ms