Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.09□□□□□ -1.75
RSPO4Q2I0M5 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC4.09□□□□□ -1.75
RSPO4Q2I0M5 HMGN2P32-201ENST00000444648 269 ntBASIC4.09□□□□□ -1.75
RSPO4Q2I0M5 AL591623.2-201ENST00000449978 222 ntBASIC4.09□□□□□ -1.75
RSPO4Q2I0M5 UBE2DNL-203ENST00000474922 222 ntBASIC4.09□□□□□ -1.75
RSPO4Q2I0M5 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.09□□□□□ -1.75
RSPO4Q2I0M5 RNU5F-2P-201ENST00000516066 82 ntBASIC4.09□□□□□ -1.75
RSPO4Q2I0M5 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC4.09□□□□□ -1.75
RSPO4Q2I0M5 MIR5688-201ENST00000580619 83 ntBASIC4.09□□□□□ -1.75
RSPO4Q2I0M5 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC4.09□□□□□ -1.75
RSPO4Q2I0M5 AC006380.1-201ENST00000603598 186 ntBASIC4.09□□□□□ -1.75
RSPO4Q2I0M5 SNORA43.4-201ENST00000629559 138 ntBASIC4.09□□□□□ -1.75
RSPO4Q2I0M5 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC4.09□□□□□ -1.75
RSPO4Q2I0M5 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
RSPO4Q2I0M5 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
RSPO4Q2I0M5 ZNF720P1-201ENST00000562403 1939 ntBASIC4.09□□□□□ -1.76
RSPO4Q2I0M5 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
RSPO4Q2I0M5 AC107068.1-201ENST00000563286 4218 ntBASIC4.09□□□□□ -1.76
RSPO4Q2I0M5 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.76
RSPO4Q2I0M5 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
RSPO4Q2I0M5 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.08□□□□□ -1.76
RSPO4Q2I0M5 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
RSPO4Q2I0M5 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.08□□□□□ -1.76
RSPO4Q2I0M5 Y_RNA.179-201ENST00000363844 90 ntBASIC4.08□□□□□ -1.76
RSPO4Q2I0M5 Y_RNA.229-201ENST00000364347 113 ntBASIC4.08□□□□□ -1.76
RSPO4Q2I0M5 Y_RNA.328-201ENST00000365208 113 ntBASIC4.08□□□□□ -1.76
RSPO4Q2I0M5 Y_RNA.346-201ENST00000365385 112 ntBASIC4.08□□□□□ -1.76
RSPO4Q2I0M5 RNU6-356P-201ENST00000384140 107 ntBASIC4.08□□□□□ -1.76
RSPO4Q2I0M5 U8.11-201ENST00000384699 133 ntBASIC4.08□□□□□ -1.76
RSPO4Q2I0M5 U8.12-201ENST00000384701 133 ntBASIC4.08□□□□□ -1.76
RSPO4Q2I0M5 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
RSPO4Q2I0M5 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
RSPO4Q2I0M5 SNORA68.2-201ENST00000391263 128 ntBASIC4.08□□□□□ -1.76
RSPO4Q2I0M5 U3.40-201ENST00000408706 208 ntBASIC4.08□□□□□ -1.76
RSPO4Q2I0M5 AC243964.1-201ENST00000441814 261 ntBASIC4.08□□□□□ -1.76
RSPO4Q2I0M5 AL078601.1-201ENST00000444542 271 ntBASIC4.08□□□□□ -1.76
RSPO4Q2I0M5 BX510359.1-201ENST00000456973 237 ntBASIC4.08□□□□□ -1.76
RSPO4Q2I0M5 U8.18-201ENST00000459285 133 ntBASIC4.08□□□□□ -1.76
RSPO4Q2I0M5 RPS26P28-201ENST00000470806 348 ntBASIC4.08□□□□□ -1.76
RSPO4Q2I0M5 RPL23AP70-201ENST00000483361 460 ntBASIC4.08□□□□□ -1.76
RSPO4Q2I0M5 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.08□□□□□ -1.76
RSPO4Q2I0M5 RNU6-412P-201ENST00000516434 106 ntBASIC4.08□□□□□ -1.76
RSPO4Q2I0M5 RN7SKP57-201ENST00000517248 293 ntBASIC4.08□□□□□ -1.76
RSPO4Q2I0M5 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC4.08□□□□□ -1.76
RSPO4Q2I0M5 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC4.08□□□□□ -1.76
RSPO4Q2I0M5 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC4.08□□□□□ -1.76
RSPO4Q2I0M5 MIR4472-2-201ENST00000582069 67 ntBASIC4.08□□□□□ -1.76
RSPO4Q2I0M5 AC024581.2-201ENST00000619986 252 ntBASIC4.08□□□□□ -1.76
RSPO4Q2I0M5 SCARNA4-202ENST00000625402 129 ntBASIC4.08□□□□□ -1.76
RSPO4Q2I0M5 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC4.08□□□□□ -1.76
RSPO4Q2I0M5 MIR3674-201ENST00000636576 68 ntBASIC4.08□□□□□ -1.76
RSPO4Q2I0M5 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.08□□□□□ -1.76
RSPO4Q2I0M5 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
RSPO4Q2I0M5 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
RSPO4Q2I0M5 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.08□□□□□ -1.76
RSPO4Q2I0M5 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC4.08□□□□□ -1.76
RSPO4Q2I0M5 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
RSPO4Q2I0M5 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
RSPO4Q2I0M5 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.07□□□□□ -1.76
RSPO4Q2I0M5 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
RSPO4Q2I0M5 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
RSPO4Q2I0M5 RNU1-20P-201ENST00000363314 162 ntBASIC4.07□□□□□ -1.76
RSPO4Q2I0M5 RNU6-756P-201ENST00000383997 107 ntBASIC4.07□□□□□ -1.76
RSPO4Q2I0M5 SNORD96B-201ENST00000386148 79 ntBASIC4.07□□□□□ -1.76
RSPO4Q2I0M5 RNU4-43P-201ENST00000410628 137 ntBASIC4.07□□□□□ -1.76
RSPO4Q2I0M5 RN7SKP53-201ENST00000411337 315 ntBASIC4.07□□□□□ -1.76
RSPO4Q2I0M5 AC096649.2-201ENST00000416186 393 ntBASIC4.07□□□□□ -1.76
RSPO4Q2I0M5 MLLT10P1-201ENST00000418346 262 ntBASIC4.07□□□□□ -1.76
RSPO4Q2I0M5 YPEL5P1-201ENST00000419731 367 ntBASIC4.07□□□□□ -1.76
RSPO4Q2I0M5 RPL23AP95-201ENST00000426806 265 ntBASIC4.07□□□□□ -1.76
RSPO4Q2I0M5 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.07□□□□□ -1.76
RSPO4Q2I0M5 RPL23AP46-201ENST00000438548 490 ntBASIC4.07□□□□□ -1.76
RSPO4Q2I0M5 HSPE1P6-201ENST00000479457 291 ntBASIC4.07□□□□□ -1.76
RSPO4Q2I0M5 RNU6-572P-201ENST00000516724 80 ntBASIC4.07□□□□□ -1.76
RSPO4Q2I0M5 RNA5SP54-201ENST00000516951 92 ntBASIC4.07□□□□□ -1.76
RSPO4Q2I0M5 RNU2-12P-201ENST00000517216 168 ntBASIC4.07□□□□□ -1.76
RSPO4Q2I0M5 MAL2-206ENST00000522187 547 ntTSL 4 BASIC4.07□□□□□ -1.76
RSPO4Q2I0M5 MIR4716-201ENST00000579628 84 ntBASIC4.07□□□□□ -1.76
RSPO4Q2I0M5 AC120024.3-201ENST00000603167 156 ntBASIC4.07□□□□□ -1.76
RSPO4Q2I0M5 MIR8069-1-201ENST00000616627 86 ntBASIC4.07□□□□□ -1.76
RSPO4Q2I0M5 MIR8069-2-201ENST00000621412 86 ntBASIC4.07□□□□□ -1.76
RSPO4Q2I0M5 AC027309.3-201ENST00000623419 351 ntBASIC4.07□□□□□ -1.76
RSPO4Q2I0M5 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC4.07□□□□□ -1.76
RSPO4Q2I0M5 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
RSPO4Q2I0M5 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
RSPO4Q2I0M5 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC4.07□□□□□ -1.76
RSPO4Q2I0M5 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC4.07□□□□□ -1.76
RSPO4Q2I0M5 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
RSPO4Q2I0M5 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
RSPO4Q2I0M5 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC4.06□□□□□ -1.76
RSPO4Q2I0M5 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
RSPO4Q2I0M5 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
RSPO4Q2I0M5 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
RSPO4Q2I0M5 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
RSPO4Q2I0M5 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
RSPO4Q2I0M5 Y_RNA.120-201ENST00000363304 110 ntBASIC4.06□□□□□ -1.76
RSPO4Q2I0M5 Y_RNA.219-201ENST00000364232 113 ntBASIC4.06□□□□□ -1.76
RSPO4Q2I0M5 SNORD32A-201ENST00000364805 84 ntBASIC4.06□□□□□ -1.76
RSPO4Q2I0M5 MIRLET7F2-201ENST00000385277 83 ntBASIC4.06□□□□□ -1.76
RSPO4Q2I0M5 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms