Protein–RNA interactions for Protein: Q15270

NKX1-1, NK1 transcription factor-related protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX1-1Q15270 SNORA48.5-201ENST00000391143 135 ntBASIC5.62□□□□□ -1.51
NKX1-1Q15270 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
NKX1-1Q15270 RNU4-43P-201ENST00000410628 137 ntBASIC5.62□□□□□ -1.51
NKX1-1Q15270 HSPE1P21-201ENST00000438283 308 ntBASIC5.62□□□□□ -1.51
NKX1-1Q15270 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC5.62□□□□□ -1.51
NKX1-1Q15270 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC5.62□□□□□ -1.51
NKX1-1Q15270 RPL35AP15-201ENST00000468042 339 ntBASIC5.62□□□□□ -1.51
NKX1-1Q15270 AC092991.1-201ENST00000477176 376 ntBASIC5.62□□□□□ -1.51
NKX1-1Q15270 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC5.62□□□□□ -1.51
NKX1-1Q15270 MIR4286-201ENST00000580651 93 ntBASIC5.62□□□□□ -1.51
NKX1-1Q15270 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC5.62□□□□□ -1.51
NKX1-1Q15270 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
NKX1-1Q15270 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.62□□□□□ -1.51
NKX1-1Q15270 AC004656.1-201ENST00000568479 4951 ntBASIC5.62□□□□□ -1.51
NKX1-1Q15270 AL121839.2-201ENST00000565058 6943 ntBASIC5.62□□□□□ -1.51
NKX1-1Q15270 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC5.61□□□□□ -1.51
NKX1-1Q15270 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
NKX1-1Q15270 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
NKX1-1Q15270 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.61□□□□□ -1.51
NKX1-1Q15270 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
NKX1-1Q15270 RNU6-655P-201ENST00000362858 107 ntBASIC5.61□□□□□ -1.51
NKX1-1Q15270 RNA5SP307-201ENST00000362863 116 ntBASIC5.61□□□□□ -1.51
NKX1-1Q15270 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
NKX1-1Q15270 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC5.61□□□□□ -1.51
NKX1-1Q15270 RN7SKP202-201ENST00000410439 330 ntBASIC5.61□□□□□ -1.51
NKX1-1Q15270 RNA5SP504-201ENST00000410676 117 ntBASIC5.61□□□□□ -1.51
NKX1-1Q15270 AC004866.1-201ENST00000411748 78 ntBASIC5.61□□□□□ -1.51
NKX1-1Q15270 AIMP1P2-201ENST00000425294 312 ntBASIC5.61□□□□□ -1.51
NKX1-1Q15270 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC5.61□□□□□ -1.51
NKX1-1Q15270 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC5.61□□□□□ -1.51
NKX1-1Q15270 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC5.61□□□□□ -1.51
NKX1-1Q15270 AL162151.2-201ENST00000448875 158 ntBASIC5.61□□□□□ -1.51
NKX1-1Q15270 PDCD5P2-201ENST00000507570 312 ntBASIC5.61□□□□□ -1.51
NKX1-1Q15270 CYCSP26-201ENST00000534107 320 ntBASIC5.61□□□□□ -1.51
NKX1-1Q15270 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC5.61□□□□□ -1.51
NKX1-1Q15270 Y_RNA.757-201ENST00000578934 114 ntBASIC5.61□□□□□ -1.51
NKX1-1Q15270 AC069528.2-201ENST00000624849 1991 ntBASIC5.61□□□□□ -1.51
NKX1-1Q15270 AL159152.1-201ENST00000635019 2587 ntBASIC5.61□□□□□ -1.51
NKX1-1Q15270 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
NKX1-1Q15270 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC5.61□□□□□ -1.51
NKX1-1Q15270 FAP-203ENST00000443424 2598 ntTSL 2 BASIC5.61□□□□□ -1.51
NKX1-1Q15270 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
NKX1-1Q15270 AL513302.2-201ENST00000562313 1842 ntBASIC5.6□□□□□ -1.51
NKX1-1Q15270 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
NKX1-1Q15270 AL691449.1-201ENST00000426570 421 ntBASIC5.6□□□□□ -1.51
NKX1-1Q15270 HSPE1P13-201ENST00000451143 297 ntBASIC5.6□□□□□ -1.51
NKX1-1Q15270 RNA5SP246-201ENST00000458909 119 ntBASIC5.6□□□□□ -1.51
NKX1-1Q15270 snoU13.28-201ENST00000459235 104 ntBASIC5.6□□□□□ -1.51
NKX1-1Q15270 FCF1P8-201ENST00000510322 597 ntBASIC5.6□□□□□ -1.51
NKX1-1Q15270 RNU2-58P-201ENST00000516403 183 ntBASIC5.6□□□□□ -1.51
NKX1-1Q15270 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC5.6□□□□□ -1.51
NKX1-1Q15270 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC5.6□□□□□ -1.51
NKX1-1Q15270 RPL23AP97-201ENST00000568955 471 ntBASIC5.6□□□□□ -1.51
NKX1-1Q15270 MIR6875-201ENST00000617506 72 ntBASIC5.6□□□□□ -1.51
NKX1-1Q15270 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
NKX1-1Q15270 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
NKX1-1Q15270 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
NKX1-1Q15270 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.6□□□□□ -1.51
NKX1-1Q15270 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.6□□□□□ -1.51
NKX1-1Q15270 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
NKX1-1Q15270 AC006971.1-201ENST00000407916 4486 ntBASIC5.6□□□□□ -1.51
NKX1-1Q15270 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
NKX1-1Q15270 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC5.59□□□□□ -1.51
NKX1-1Q15270 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC5.59□□□□□ -1.51
NKX1-1Q15270 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
NKX1-1Q15270 EEF1B2P7-201ENST00000451177 676 ntBASIC5.59□□□□□ -1.51
NKX1-1Q15270 AC090142.3-201ENST00000519012 385 ntBASIC5.59□□□□□ -1.51
NKX1-1Q15270 IFITM8P-201ENST00000522529 394 ntBASIC5.59□□□□□ -1.51
NKX1-1Q15270 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC5.59□□□□□ -1.51
NKX1-1Q15270 AC006272.2-201ENST00000594725 163 ntBASIC5.59□□□□□ -1.51
NKX1-1Q15270 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC5.59□□□□□ -1.51
NKX1-1Q15270 HOTTIP_4.1-201ENST00000618195 165 ntBASIC5.59□□□□□ -1.51
NKX1-1Q15270 AC091905.2-201ENST00000623143 306 ntBASIC5.59□□□□□ -1.51
NKX1-1Q15270 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
NKX1-1Q15270 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC5.59□□□□□ -1.51
NKX1-1Q15270 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
NKX1-1Q15270 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
NKX1-1Q15270 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
NKX1-1Q15270 FTX-210ENST00000603037 8347 ntTSL 5 BASIC5.58□□□□□ -1.52
NKX1-1Q15270 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
NKX1-1Q15270 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
NKX1-1Q15270 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
NKX1-1Q15270 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC5.58□□□□□ -1.52
NKX1-1Q15270 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
NKX1-1Q15270 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
NKX1-1Q15270 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC5.58□□□□□ -1.52
NKX1-1Q15270 RNU6-768P-201ENST00000384683 107 ntBASIC5.58□□□□□ -1.52
NKX1-1Q15270 RNU6-476P-201ENST00000384726 107 ntBASIC5.58□□□□□ -1.52
NKX1-1Q15270 RNU6-460P-201ENST00000391158 108 ntBASIC5.58□□□□□ -1.52
NKX1-1Q15270 RPL21P65-201ENST00000406094 466 ntBASIC5.58□□□□□ -1.52
NKX1-1Q15270 CYCSP19-201ENST00000411715 316 ntBASIC5.58□□□□□ -1.52
NKX1-1Q15270 AC023632.4-201ENST00000517783 191 ntBASIC5.58□□□□□ -1.52
NKX1-1Q15270 RNU1-30P-201ENST00000606575 163 ntBASIC5.58□□□□□ -1.52
NKX1-1Q15270 AC069200.1-201ENST00000609511 323 ntBASIC5.58□□□□□ -1.52
NKX1-1Q15270 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
NKX1-1Q15270 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC5.58□□□□□ -1.52
NKX1-1Q15270 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC5.58□□□□□ -1.52
NKX1-1Q15270 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
NKX1-1Q15270 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC5.57□□□□□ -1.52
NKX1-1Q15270 AL161912.2-201ENST00000565707 3007 ntBASIC5.57□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 124.6 ms