Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
PCDH1Q08174 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.05□□□□□ -1.76
PCDH1Q08174 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.05□□□□□ -1.76
PCDH1Q08174 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.05□□□□□ -1.76
PCDH1Q08174 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
PCDH1Q08174 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
PCDH1Q08174 IL33-203ENST00000456383 2501 ntTSL 5 BASIC4.04□□□□□ -1.76
PCDH1Q08174 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.04□□□□□ -1.76
PCDH1Q08174 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
PCDH1Q08174 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
PCDH1Q08174 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
PCDH1Q08174 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
PCDH1Q08174 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.04□□□□□ -1.76
PCDH1Q08174 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
PCDH1Q08174 Y_RNA.101-201ENST00000363154 102 ntBASIC4.04□□□□□ -1.76
PCDH1Q08174 RNA5SP509-201ENST00000364577 119 ntBASIC4.04□□□□□ -1.76
PCDH1Q08174 RNU4-56P-201ENST00000364700 142 ntBASIC4.04□□□□□ -1.76
PCDH1Q08174 RNU6-793P-201ENST00000384233 104 ntBASIC4.04□□□□□ -1.76
PCDH1Q08174 Y_RNA.498-201ENST00000384460 102 ntBASIC4.04□□□□□ -1.76
PCDH1Q08174 U3.39-201ENST00000408569 239 ntBASIC4.04□□□□□ -1.76
PCDH1Q08174 SNORA11-201ENST00000408789 128 ntBASIC4.04□□□□□ -1.76
PCDH1Q08174 CRYBB2P1-203ENST00000415709 538 ntBASIC4.04□□□□□ -1.76
PCDH1Q08174 RAB28P5-201ENST00000427490 651 ntBASIC4.04□□□□□ -1.76
PCDH1Q08174 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC4.04□□□□□ -1.76
PCDH1Q08174 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.04□□□□□ -1.76
PCDH1Q08174 RN7SL303P-201ENST00000469773 251 ntBASIC4.04□□□□□ -1.76
PCDH1Q08174 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.04□□□□□ -1.76
PCDH1Q08174 RNU6-191P-201ENST00000516295 94 ntBASIC4.04□□□□□ -1.76
PCDH1Q08174 AC025884.1-201ENST00000556034 378 ntBASIC4.04□□□□□ -1.76
PCDH1Q08174 MIR5692C2-201ENST00000577959 77 ntBASIC4.04□□□□□ -1.76
PCDH1Q08174 MIR3145-201ENST00000580727 82 ntBASIC4.04□□□□□ -1.76
PCDH1Q08174 AC024220.1-201ENST00000603675 484 ntBASIC4.04□□□□□ -1.76
PCDH1Q08174 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.04□□□□□ -1.76
PCDH1Q08174 TEX41-243ENST00000614173 190 ntTSL 5 BASIC4.04□□□□□ -1.76
PCDH1Q08174 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.04□□□□□ -1.76
PCDH1Q08174 AL365265.1-201ENST00000621045 234 ntBASIC4.04□□□□□ -1.76
PCDH1Q08174 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
PCDH1Q08174 AC092593.1-201ENST00000515413 1815 ntBASIC4.04□□□□□ -1.76
PCDH1Q08174 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
PCDH1Q08174 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
PCDH1Q08174 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.03□□□□□ -1.76
PCDH1Q08174 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
PCDH1Q08174 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.03□□□□□ -1.76
PCDH1Q08174 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
PCDH1Q08174 AC099654.7-201ENST00000635788 2127 ntBASIC4.03□□□□□ -1.76
PCDH1Q08174 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
PCDH1Q08174 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
PCDH1Q08174 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC4.03□□□□□ -1.76
PCDH1Q08174 RNU6-245P-201ENST00000384020 107 ntBASIC4.03□□□□□ -1.76
PCDH1Q08174 RNU6-211P-201ENST00000384047 107 ntBASIC4.03□□□□□ -1.76
PCDH1Q08174 Y_RNA.441-201ENST00000384123 112 ntBASIC4.03□□□□□ -1.76
PCDH1Q08174 AL512633.1-201ENST00000399931 655 ntBASIC4.03□□□□□ -1.76
PCDH1Q08174 AL451074.5-201ENST00000415894 435 ntBASIC4.03□□□□□ -1.76
PCDH1Q08174 TRAPPC2P4-201ENST00000421750 331 ntBASIC4.03□□□□□ -1.76
PCDH1Q08174 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC4.03□□□□□ -1.76
PCDH1Q08174 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC4.03□□□□□ -1.76
PCDH1Q08174 AC109327.1-201ENST00000471666 403 ntBASIC4.03□□□□□ -1.76
PCDH1Q08174 AL121594.1-201ENST00000475906 575 ntBASIC4.03□□□□□ -1.76
PCDH1Q08174 AC090525.1-201ENST00000479116 478 ntBASIC4.03□□□□□ -1.76
PCDH1Q08174 RPS29P19-201ENST00000479709 171 ntBASIC4.03□□□□□ -1.76
PCDH1Q08174 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC4.03□□□□□ -1.76
PCDH1Q08174 RNA5SP519-201ENST00000516480 119 ntBASIC4.03□□□□□ -1.76
PCDH1Q08174 IGKV2D-19-201ENST00000523346 262 ntBASIC4.03□□□□□ -1.76
PCDH1Q08174 AC115990.1-201ENST00000526957 301 ntBASIC4.03□□□□□ -1.76
PCDH1Q08174 POC1B-211ENST00000549504 581 ntTSL 5 BASIC4.03□□□□□ -1.76
PCDH1Q08174 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC4.03□□□□□ -1.76
PCDH1Q08174 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC4.03□□□□□ -1.76
PCDH1Q08174 AL110115.1-201ENST00000614396 364 ntBASIC4.03□□□□□ -1.76
PCDH1Q08174 AC004467.1-201ENST00000615678 330 ntBASIC4.03□□□□□ -1.76
PCDH1Q08174 AC073308.1-201ENST00000623696 305 ntBASIC4.03□□□□□ -1.76
PCDH1Q08174 snoU18.1-201ENST00000629629 71 ntBASIC4.03□□□□□ -1.76
PCDH1Q08174 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
PCDH1Q08174 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC4.02□□□□□ -1.77
PCDH1Q08174 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.02□□□□□ -1.77
PCDH1Q08174 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
PCDH1Q08174 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
PCDH1Q08174 AC018555.1-201ENST00000567548 1980 ntBASIC4.02□□□□□ -1.77
PCDH1Q08174 RNU6-653P-201ENST00000363074 106 ntBASIC4.02□□□□□ -1.77
PCDH1Q08174 AL357139.1-201ENST00000407792 426 ntBASIC4.02□□□□□ -1.77
PCDH1Q08174 MIR1183-201ENST00000408856 89 ntBASIC4.02□□□□□ -1.77
PCDH1Q08174 ELOCP21-201ENST00000412558 336 ntBASIC4.02□□□□□ -1.77
PCDH1Q08174 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.02□□□□□ -1.77
PCDH1Q08174 AC005300.1-201ENST00000428401 373 ntBASIC4.02□□□□□ -1.77
PCDH1Q08174 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC4.02□□□□□ -1.77
PCDH1Q08174 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC4.02□□□□□ -1.77
PCDH1Q08174 AC091179.3-201ENST00000474761 144 ntBASIC4.02□□□□□ -1.77
PCDH1Q08174 RN7SL271P-201ENST00000487601 295 ntBASIC4.02□□□□□ -1.77
PCDH1Q08174 AC091167.1-201ENST00000492017 396 ntBASIC4.02□□□□□ -1.77
PCDH1Q08174 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.02□□□□□ -1.77
PCDH1Q08174 AL356575.1-201ENST00000603008 283 ntBASIC4.02□□□□□ -1.77
PCDH1Q08174 MIR7151-201ENST00000617477 60 ntBASIC4.02□□□□□ -1.77
PCDH1Q08174 AC091932.3-201ENST00000624223 323 ntBASIC4.02□□□□□ -1.77
PCDH1Q08174 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.02□□□□□ -1.77
PCDH1Q08174 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
PCDH1Q08174 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
PCDH1Q08174 RNU6-799P-201ENST00000363567 107 ntBASIC4.01□□□□□ -1.77
PCDH1Q08174 RNU6-81P-201ENST00000365608 104 ntBASIC4.01□□□□□ -1.77
PCDH1Q08174 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
PCDH1Q08174 RNU6-1081P-201ENST00000384537 107 ntBASIC4.01□□□□□ -1.77
PCDH1Q08174 MIR549A-201ENST00000385268 96 ntBASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms