Protein–RNA interactions for Protein: P43681

CHRNA4, Neuronal acetylcholine receptor subunit alpha-4, humanhuman

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4P43681 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
CHRNA4P43681 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
CHRNA4P43681 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CHRNA4P43681 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
CHRNA4P43681 AC087190.4-201ENST00000574616 8334 ntBASIC4.21□□□□□ -1.74
CHRNA4P43681 RNU1-94P-201ENST00000362627 173 ntBASIC4.21□□□□□ -1.74
CHRNA4P43681 RNU6-1048P-201ENST00000364054 107 ntBASIC4.21□□□□□ -1.74
CHRNA4P43681 RNU6-1131P-201ENST00000364955 107 ntBASIC4.21□□□□□ -1.74
CHRNA4P43681 AC068538.1-201ENST00000376856 336 ntBASIC4.21□□□□□ -1.74
CHRNA4P43681 RNU6-969P-201ENST00000383900 105 ntBASIC4.21□□□□□ -1.74
CHRNA4P43681 MIR513A2-201ENST00000385249 127 ntBASIC4.21□□□□□ -1.74
CHRNA4P43681 SNORD72-201ENST00000390994 80 ntBASIC4.21□□□□□ -1.74
CHRNA4P43681 RNU6-1228P-201ENST00000391014 107 ntBASIC4.21□□□□□ -1.74
CHRNA4P43681 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CHRNA4P43681 ELOCP21-201ENST00000412558 336 ntBASIC4.21□□□□□ -1.74
CHRNA4P43681 RPL26P27-201ENST00000414397 437 ntBASIC4.21□□□□□ -1.74
CHRNA4P43681 RPL23AP95-201ENST00000426806 265 ntBASIC4.21□□□□□ -1.74
CHRNA4P43681 AC007560.1-201ENST00000426912 237 ntBASIC4.21□□□□□ -1.74
CHRNA4P43681 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC4.21□□□□□ -1.74
CHRNA4P43681 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CHRNA4P43681 AL078601.1-201ENST00000444542 271 ntBASIC4.21□□□□□ -1.74
CHRNA4P43681 snoU109.2-201ENST00000459316 135 ntBASIC4.21□□□□□ -1.74
CHRNA4P43681 AC091167.1-201ENST00000492017 396 ntBASIC4.21□□□□□ -1.74
CHRNA4P43681 RNU6-561P-201ENST00000516222 102 ntBASIC4.21□□□□□ -1.74
CHRNA4P43681 RNU6-1061P-201ENST00000516530 99 ntBASIC4.21□□□□□ -1.74
CHRNA4P43681 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC4.21□□□□□ -1.74
CHRNA4P43681 MIR5688-201ENST00000580619 83 ntBASIC4.21□□□□□ -1.74
CHRNA4P43681 MIR3653-201ENST00000625572 110 ntBASIC4.21□□□□□ -1.74
CHRNA4P43681 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC4.21□□□□□ -1.74
CHRNA4P43681 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
CHRNA4P43681 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CHRNA4P43681 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CHRNA4P43681 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CHRNA4P43681 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CHRNA4P43681 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.21□□□□□ -1.74
CHRNA4P43681 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CHRNA4P43681 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CHRNA4P43681 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.2□□□□□ -1.74
CHRNA4P43681 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC4.2□□□□□ -1.74
CHRNA4P43681 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.2□□□□□ -1.74
CHRNA4P43681 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
CHRNA4P43681 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.2□□□□□ -1.74
CHRNA4P43681 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.2□□□□□ -1.74
CHRNA4P43681 MIR383-201ENST00000362257 73 ntBASIC4.2□□□□□ -1.74
CHRNA4P43681 SNORD114-19-201ENST00000363072 75 ntBASIC4.2□□□□□ -1.74
CHRNA4P43681 RNU6-1249P-201ENST00000363237 111 ntBASIC4.2□□□□□ -1.74
CHRNA4P43681 U3.9-201ENST00000363823 204 ntBASIC4.2□□□□□ -1.74
CHRNA4P43681 SNORD32A-201ENST00000364805 84 ntBASIC4.2□□□□□ -1.74
CHRNA4P43681 RNU6-728P-201ENST00000365375 104 ntBASIC4.2□□□□□ -1.74
CHRNA4P43681 RNU6-49P-201ENST00000384256 107 ntBASIC4.2□□□□□ -1.74
CHRNA4P43681 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.2□□□□□ -1.74
CHRNA4P43681 AC243964.1-201ENST00000441814 261 ntBASIC4.2□□□□□ -1.74
CHRNA4P43681 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.2□□□□□ -1.74
CHRNA4P43681 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.2□□□□□ -1.74
CHRNA4P43681 HMGB3P8-201ENST00000449709 577 ntBASIC4.2□□□□□ -1.74
CHRNA4P43681 AC146507.2-201ENST00000460608 476 ntBASIC4.2□□□□□ -1.74
CHRNA4P43681 UQCRHP4-201ENST00000471686 272 ntBASIC4.2□□□□□ -1.74
CHRNA4P43681 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC4.2□□□□□ -1.74
CHRNA4P43681 AC025554.1-201ENST00000505641 188 ntBASIC4.2□□□□□ -1.74
CHRNA4P43681 PARP4P3-201ENST00000510265 317 ntBASIC4.2□□□□□ -1.74
CHRNA4P43681 RNU6-436P-201ENST00000516171 114 ntBASIC4.2□□□□□ -1.74
CHRNA4P43681 RNA5SP54-201ENST00000516951 92 ntBASIC4.2□□□□□ -1.74
CHRNA4P43681 AC090142.3-201ENST00000519012 385 ntBASIC4.2□□□□□ -1.74
CHRNA4P43681 CYCSP29-201ENST00000533731 318 ntBASIC4.2□□□□□ -1.74
CHRNA4P43681 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC4.2□□□□□ -1.74
CHRNA4P43681 MIR5571-201ENST00000577998 113 ntBASIC4.2□□□□□ -1.74
CHRNA4P43681 MIR1254-2-201ENST00000579553 63 ntBASIC4.2□□□□□ -1.74
CHRNA4P43681 AC062037.1-201ENST00000605302 128 ntBASIC4.2□□□□□ -1.74
CHRNA4P43681 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
CHRNA4P43681 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CHRNA4P43681 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CHRNA4P43681 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CHRNA4P43681 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC4.2□□□□□ -1.74
CHRNA4P43681 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CHRNA4P43681 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CHRNA4P43681 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CHRNA4P43681 ZNF962P-201ENST00000443465 3140 ntBASIC4.19□□□□□ -1.74
CHRNA4P43681 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.19□□□□□ -1.74
CHRNA4P43681 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.19□□□□□ -1.74
CHRNA4P43681 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.19□□□□□ -1.74
CHRNA4P43681 RNA5SP388-201ENST00000362584 119 ntBASIC4.19□□□□□ -1.74
CHRNA4P43681 RNU6-527P-201ENST00000363425 104 ntBASIC4.19□□□□□ -1.74
CHRNA4P43681 RNU6-1082P-201ENST00000364574 107 ntBASIC4.19□□□□□ -1.74
CHRNA4P43681 RNU6-597P-201ENST00000365620 102 ntBASIC4.19□□□□□ -1.74
CHRNA4P43681 SNORA72.4-201ENST00000384174 132 ntBASIC4.19□□□□□ -1.74
CHRNA4P43681 SNORA20B-201ENST00000384220 132 ntBASIC4.19□□□□□ -1.74
CHRNA4P43681 SNORA37-201ENST00000384504 129 ntBASIC4.19□□□□□ -1.74
CHRNA4P43681 MT-TT-201ENST00000387460 66 ntBASIC4.19□□□□□ -1.74
CHRNA4P43681 AL606845.1-201ENST00000404881 255 ntBASIC4.19□□□□□ -1.74
CHRNA4P43681 AC008065.1-201ENST00000428525 348 ntBASIC4.19□□□□□ -1.74
CHRNA4P43681 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC4.19□□□□□ -1.74
CHRNA4P43681 AC006028.1-201ENST00000438379 402 ntBASIC4.19□□□□□ -1.74
CHRNA4P43681 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.19□□□□□ -1.74
CHRNA4P43681 RPL39P29-201ENST00000447779 157 ntBASIC4.19□□□□□ -1.74
CHRNA4P43681 AC006517.1-201ENST00000480485 328 ntBASIC4.19□□□□□ -1.74
CHRNA4P43681 AC105137.1-201ENST00000484355 562 ntBASIC4.19□□□□□ -1.74
CHRNA4P43681 AC099522.1-202ENST00000514718 367 ntBASIC4.19□□□□□ -1.74
CHRNA4P43681 RNU6-65P-201ENST00000516332 98 ntBASIC4.19□□□□□ -1.74
CHRNA4P43681 RNU6-572P-201ENST00000516724 80 ntBASIC4.19□□□□□ -1.74
CHRNA4P43681 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 129.3 ms