Protein–RNA interactions for Protein: P20849

COL9A1, Collagen alpha-1(IX) chain, humanhuman

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1P20849 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
COL9A1P20849 AL450345.1-202ENST00000605741 3881 ntBASIC4.93□□□□□ -1.62
COL9A1P20849 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
COL9A1P20849 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
COL9A1P20849 RNU4-15P-201ENST00000362613 141 ntBASIC4.93□□□□□ -1.62
COL9A1P20849 RNU6-1152P-201ENST00000384576 107 ntBASIC4.93□□□□□ -1.62
COL9A1P20849 MIR124-3-201ENST00000384866 87 ntBASIC4.93□□□□□ -1.62
COL9A1P20849 MIR586-201ENST00000385035 97 ntBASIC4.93□□□□□ -1.62
COL9A1P20849 MIR34B-201ENST00000385076 84 ntBASIC4.93□□□□□ -1.62
COL9A1P20849 SNORD78.1-201ENST00000390866 65 ntBASIC4.93□□□□□ -1.62
COL9A1P20849 BX276092.6-201ENST00000430476 250 ntBASIC4.93□□□□□ -1.62
COL9A1P20849 BX276092.8-201ENST00000455722 250 ntBASIC4.93□□□□□ -1.62
COL9A1P20849 AC010469.1-201ENST00000463864 576 ntBASIC4.93□□□□□ -1.62
COL9A1P20849 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC4.93□□□□□ -1.62
COL9A1P20849 RPL39P34-201ENST00000477141 156 ntBASIC4.93□□□□□ -1.62
COL9A1P20849 AC083906.5-201ENST00000503722 328 ntBASIC4.93□□□□□ -1.62
COL9A1P20849 AC093815.1-201ENST00000508637 280 ntBASIC4.93□□□□□ -1.62
COL9A1P20849 RNU6-91P-201ENST00000607774 107 ntBASIC4.93□□□□□ -1.62
COL9A1P20849 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
COL9A1P20849 SALL4P2-201ENST00000423288 2910 ntBASIC4.92□□□□□ -1.62
COL9A1P20849 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
COL9A1P20849 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
COL9A1P20849 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
COL9A1P20849 RNA5SP513-201ENST00000364648 118 ntBASIC4.92□□□□□ -1.62
COL9A1P20849 Y_RNA.549-201ENST00000384657 102 ntBASIC4.92□□□□□ -1.62
COL9A1P20849 MIR29B2-201ENST00000385055 81 ntBASIC4.92□□□□□ -1.62
COL9A1P20849 AL356387.2-201ENST00000422272 243 ntBASIC4.92□□□□□ -1.62
COL9A1P20849 AL121890.1-201ENST00000435457 205 ntBASIC4.92□□□□□ -1.62
COL9A1P20849 RPL23AP93-201ENST00000440847 484 ntBASIC4.92□□□□□ -1.62
COL9A1P20849 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.92□□□□□ -1.62
COL9A1P20849 AC107626.1-201ENST00000471084 183 ntBASIC4.92□□□□□ -1.62
COL9A1P20849 COX6CP6-201ENST00000490840 228 ntBASIC4.92□□□□□ -1.62
COL9A1P20849 SCARNA22-201ENST00000503991 125 ntBASIC4.92□□□□□ -1.62
COL9A1P20849 MRPS36P2-201ENST00000512569 299 ntBASIC4.92□□□□□ -1.62
COL9A1P20849 RNU6-113P-201ENST00000516653 101 ntBASIC4.92□□□□□ -1.62
COL9A1P20849 RNU6-158P-201ENST00000517104 100 ntBASIC4.92□□□□□ -1.62
COL9A1P20849 RNU6-1073P-201ENST00000517182 106 ntBASIC4.92□□□□□ -1.62
COL9A1P20849 RNU4ATAC17P-201ENST00000517272 120 ntBASIC4.92□□□□□ -1.62
COL9A1P20849 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC4.92□□□□□ -1.62
COL9A1P20849 FAM27B-201ENST00000610601 213 ntBASIC4.92□□□□□ -1.62
COL9A1P20849 uc_338.4-201ENST00000616635 176 ntBASIC4.92□□□□□ -1.62
COL9A1P20849 MIR6875-201ENST00000617506 72 ntBASIC4.92□□□□□ -1.62
COL9A1P20849 MIR3653-201ENST00000625572 110 ntBASIC4.92□□□□□ -1.62
COL9A1P20849 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.92□□□□□ -1.62
COL9A1P20849 MIR2052-201ENST00000636055 55 ntBASIC4.92□□□□□ -1.62
COL9A1P20849 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
COL9A1P20849 AL589743.1-201ENST00000551932 2712 ntBASIC4.92□□□□□ -1.62
COL9A1P20849 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC4.92□□□□□ -1.62
COL9A1P20849 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
COL9A1P20849 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC4.92□□□□□ -1.62
COL9A1P20849 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.91□□□□□ -1.62
COL9A1P20849 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
COL9A1P20849 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
COL9A1P20849 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
COL9A1P20849 RNA5SP453-201ENST00000362503 119 ntBASIC4.91□□□□□ -1.62
COL9A1P20849 Y_RNA.91-201ENST00000363042 107 ntBASIC4.91□□□□□ -1.62
COL9A1P20849 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
COL9A1P20849 RNU11-201ENST00000387069 134 ntBASIC4.91□□□□□ -1.62
COL9A1P20849 AL445584.1-201ENST00000431451 330 ntBASIC4.91□□□□□ -1.62
COL9A1P20849 RPS29P7-201ENST00000439662 171 ntBASIC4.91□□□□□ -1.62
COL9A1P20849 AL645939.1-201ENST00000453429 797 ntBASIC4.91□□□□□ -1.62
COL9A1P20849 RPS26P55-201ENST00000471178 356 ntBASIC4.91□□□□□ -1.62
COL9A1P20849 PARP4P3-201ENST00000510265 317 ntBASIC4.91□□□□□ -1.62
COL9A1P20849 HSPE1P5-201ENST00000561489 272 ntBASIC4.91□□□□□ -1.62
COL9A1P20849 MIR2681-201ENST00000581814 105 ntBASIC4.91□□□□□ -1.62
COL9A1P20849 AC022726.1-201ENST00000587475 207 ntBASIC4.91□□□□□ -1.62
COL9A1P20849 AL360012.1-201ENST00000602813 131 ntBASIC4.91□□□□□ -1.62
COL9A1P20849 Y_RNA.818-201ENST00000618813 71 ntBASIC4.91□□□□□ -1.62
COL9A1P20849 TEX41-300ENST00000631048 69 ntTSL 5 BASIC4.91□□□□□ -1.62
COL9A1P20849 MIR3199-2-201ENST00000636243 86 ntBASIC4.91□□□□□ -1.62
COL9A1P20849 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC4.91□□□□□ -1.62
COL9A1P20849 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
COL9A1P20849 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
COL9A1P20849 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
COL9A1P20849 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
COL9A1P20849 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
COL9A1P20849 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
COL9A1P20849 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
COL9A1P20849 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.62
COL9A1P20849 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
COL9A1P20849 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.62
COL9A1P20849 IL33-202ENST00000417746 2327 ntTSL 2 BASIC4.9□□□□□ -1.62
COL9A1P20849 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
COL9A1P20849 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC4.9□□□□□ -1.62
COL9A1P20849 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.9□□□□□ -1.62
COL9A1P20849 RNU6-600P-201ENST00000362524 99 ntBASIC4.9□□□□□ -1.63
COL9A1P20849 SNORA27.1-201ENST00000362604 124 ntBASIC4.9□□□□□ -1.63
COL9A1P20849 RNU6-1010P-201ENST00000362757 107 ntBASIC4.9□□□□□ -1.63
COL9A1P20849 AL355796.1-201ENST00000406706 323 ntBASIC4.9□□□□□ -1.63
COL9A1P20849 AC114755.2-201ENST00000413520 361 ntBASIC4.9□□□□□ -1.63
COL9A1P20849 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC4.9□□□□□ -1.63
COL9A1P20849 SNORD108-201ENST00000459332 71 ntBASIC4.9□□□□□ -1.63
COL9A1P20849 RN7SL429P-201ENST00000479090 223 ntBASIC4.9□□□□□ -1.63
COL9A1P20849 RN7SL489P-201ENST00000486185 223 ntBASIC4.9□□□□□ -1.63
COL9A1P20849 RN7SL327P-201ENST00000488659 223 ntBASIC4.9□□□□□ -1.63
COL9A1P20849 AC145146.1-201ENST00000496370 254 ntBASIC4.9□□□□□ -1.63
COL9A1P20849 RNU6ATAC17P-201ENST00000516074 71 ntBASIC4.9□□□□□ -1.63
COL9A1P20849 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC4.9□□□□□ -1.63
COL9A1P20849 AL365205.2-201ENST00000594586 68 ntBASIC4.9□□□□□ -1.63
COL9A1P20849 RN7SL853P-201ENST00000617250 223 ntBASIC4.9□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms