Protein–RNA interactions for Protein: P18433

PTPRA, Receptor-type tyrosine-protein phosphatase alpha, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRAP18433 MIR3651-201ENST00000630427 90 ntBASIC4.32□□□□□ -1.72
PTPRAP18433 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
PTPRAP18433 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
PTPRAP18433 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
PTPRAP18433 AL136964.1-201ENST00000622038 2990 ntBASIC4.32□□□□□ -1.72
PTPRAP18433 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.31□□□□□ -1.72
PTPRAP18433 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
PTPRAP18433 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.31□□□□□ -1.72
PTPRAP18433 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
PTPRAP18433 Y_RNA.136-201ENST00000363444 102 ntBASIC4.31□□□□□ -1.72
PTPRAP18433 Y_RNA.331-201ENST00000365267 102 ntBASIC4.31□□□□□ -1.72
PTPRAP18433 RNU6-81P-201ENST00000365608 104 ntBASIC4.31□□□□□ -1.72
PTPRAP18433 RNU6-142P-201ENST00000384019 107 ntBASIC4.31□□□□□ -1.72
PTPRAP18433 SNORD116-20-201ENST00000384529 92 ntBASIC4.31□□□□□ -1.72
PTPRAP18433 RNU6-159P-201ENST00000391080 106 ntBASIC4.31□□□□□ -1.72
PTPRAP18433 U3.39-201ENST00000408569 239 ntBASIC4.31□□□□□ -1.72
PTPRAP18433 RNU6-1135P-201ENST00000411083 103 ntBASIC4.31□□□□□ -1.72
PTPRAP18433 AL390729.2-201ENST00000416137 156 ntBASIC4.31□□□□□ -1.72
PTPRAP18433 RPL23AP95-201ENST00000426806 265 ntBASIC4.31□□□□□ -1.72
PTPRAP18433 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC4.31□□□□□ -1.72
PTPRAP18433 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC4.31□□□□□ -1.72
PTPRAP18433 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC4.31□□□□□ -1.72
PTPRAP18433 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.31□□□□□ -1.72
PTPRAP18433 AC009237.7-201ENST00000447357 229 ntBASIC4.31□□□□□ -1.72
PTPRAP18433 UQCRBP2-201ENST00000447827 297 ntBASIC4.31□□□□□ -1.72
PTPRAP18433 AC007395.1-201ENST00000451333 677 ntBASIC4.31□□□□□ -1.72
PTPRAP18433 AC008155.2-201ENST00000464337 397 ntBASIC4.31□□□□□ -1.72
PTPRAP18433 RPL23AP14-201ENST00000468281 468 ntBASIC4.31□□□□□ -1.72
PTPRAP18433 SNRPGP7-201ENST00000469016 106 ntBASIC4.31□□□□□ -1.72
PTPRAP18433 SNORA40.9-201ENST00000515895 93 ntBASIC4.31□□□□□ -1.72
PTPRAP18433 RNU6-58P-201ENST00000517143 103 ntBASIC4.31□□□□□ -1.72
PTPRAP18433 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC4.31□□□□□ -1.72
PTPRAP18433 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC4.31□□□□□ -1.72
PTPRAP18433 AC011471.1-201ENST00000585766 187 ntBASIC4.31□□□□□ -1.72
PTPRAP18433 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
PTPRAP18433 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
PTPRAP18433 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC4.31□□□□□ -1.72
PTPRAP18433 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
PTPRAP18433 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.31□□□□□ -1.72
PTPRAP18433 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
PTPRAP18433 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.31□□□□□ -1.72
PTPRAP18433 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
PTPRAP18433 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.3□□□□□ -1.72
PTPRAP18433 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
PTPRAP18433 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
PTPRAP18433 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
PTPRAP18433 SNORD56.1-201ENST00000362913 68 ntBASIC4.3□□□□□ -1.72
PTPRAP18433 Y_RNA.230-201ENST00000364348 109 ntBASIC4.3□□□□□ -1.72
PTPRAP18433 RNU6-1145P-201ENST00000384246 107 ntBASIC4.3□□□□□ -1.72
PTPRAP18433 MTHFD2P2-201ENST00000407725 247 ntBASIC4.3□□□□□ -1.72
PTPRAP18433 AC092047.1-201ENST00000424997 240 ntBASIC4.3□□□□□ -1.72
PTPRAP18433 IGKV1OR9-2-201ENST00000431378 277 ntBASIC4.3□□□□□ -1.72
PTPRAP18433 RBMY2UP-201ENST00000453474 324 ntBASIC4.3□□□□□ -1.72
PTPRAP18433 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC4.3□□□□□ -1.72
PTPRAP18433 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC4.3□□□□□ -1.72
PTPRAP18433 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC4.3□□□□□ -1.72
PTPRAP18433 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC4.3□□□□□ -1.72
PTPRAP18433 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC4.3□□□□□ -1.72
PTPRAP18433 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC4.3□□□□□ -1.72
PTPRAP18433 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
PTPRAP18433 AC118273.1-201ENST00000525324 3006 ntBASIC4.3□□□□□ -1.72
PTPRAP18433 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
PTPRAP18433 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.3□□□□□ -1.72
PTPRAP18433 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
PTPRAP18433 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
PTPRAP18433 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
PTPRAP18433 UBE3AP2-201ENST00000429033 2259 ntBASIC4.29□□□□□ -1.72
PTPRAP18433 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
PTPRAP18433 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
PTPRAP18433 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
PTPRAP18433 AC011266.1-201ENST00000624119 3569 ntBASIC4.29□□□□□ -1.72
PTPRAP18433 Y_RNA.435-201ENST00000384095 112 ntBASIC4.29□□□□□ -1.72
PTPRAP18433 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC4.29□□□□□ -1.72
PTPRAP18433 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.29□□□□□ -1.72
PTPRAP18433 HMGN2P21-201ENST00000447764 270 ntBASIC4.29□□□□□ -1.72
PTPRAP18433 RN7SL601P-201ENST00000471221 293 ntBASIC4.29□□□□□ -1.72
PTPRAP18433 RPL32P34-201ENST00000486380 400 ntBASIC4.29□□□□□ -1.72
PTPRAP18433 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.29□□□□□ -1.72
PTPRAP18433 RNU6-1073P-201ENST00000517182 106 ntBASIC4.29□□□□□ -1.72
PTPRAP18433 AC090281.1-201ENST00000523019 276 ntBASIC4.29□□□□□ -1.72
PTPRAP18433 AC005000.2-201ENST00000605468 310 ntBASIC4.29□□□□□ -1.72
PTPRAP18433 AC005828.6-201ENST00000606610 232 ntBASIC4.29□□□□□ -1.72
PTPRAP18433 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
PTPRAP18433 U2.21-201ENST00000637295 81 ntBASIC4.29□□□□□ -1.72
PTPRAP18433 AP000553.6-201ENST00000641242 118 ntBASIC4.29□□□□□ -1.72
PTPRAP18433 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
PTPRAP18433 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
PTPRAP18433 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC4.29□□□□□ -1.72
PTPRAP18433 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC4.28□□□□□ -1.72
PTPRAP18433 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
PTPRAP18433 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.28□□□□□ -1.72
PTPRAP18433 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
PTPRAP18433 RNU1-108P-201ENST00000362556 161 ntBASIC4.28□□□□□ -1.72
PTPRAP18433 RNU1-33P-201ENST00000364249 162 ntBASIC4.28□□□□□ -1.72
PTPRAP18433 Y_RNA.597-201ENST00000410463 100 ntBASIC4.28□□□□□ -1.72
PTPRAP18433 RN7SKP177-201ENST00000410567 355 ntBASIC4.28□□□□□ -1.72
PTPRAP18433 Z92545.1-201ENST00000411782 234 ntBASIC4.28□□□□□ -1.72
PTPRAP18433 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC4.28□□□□□ -1.72
PTPRAP18433 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC4.28□□□□□ -1.72
PTPRAP18433 MTATP6P7-201ENST00000453315 681 ntBASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 193.4 ms