Protein–RNA interactions for Protein: P14543

NID1, Nidogen-1, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NID1P14543 MIR23A-201ENST00000385245 73 ntBASIC4.09□□□□□ -1.75
NID1P14543 RNA5SP146-201ENST00000410743 123 ntBASIC4.09□□□□□ -1.75
NID1P14543 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.09□□□□□ -1.75
NID1P14543 YPEL5P1-201ENST00000419731 367 ntBASIC4.09□□□□□ -1.75
NID1P14543 AL732292.1-201ENST00000426692 226 ntBASIC4.09□□□□□ -1.75
NID1P14543 HMGB3P8-201ENST00000449709 577 ntBASIC4.09□□□□□ -1.75
NID1P14543 HSPE1P13-201ENST00000451143 297 ntBASIC4.09□□□□□ -1.75
NID1P14543 RPL26P9-201ENST00000457466 433 ntBASIC4.09□□□□□ -1.75
NID1P14543 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.09□□□□□ -1.75
NID1P14543 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC4.09□□□□□ -1.75
NID1P14543 Y_RNA.694-201ENST00000516677 117 ntBASIC4.09□□□□□ -1.75
NID1P14543 SNORA31.23-201ENST00000517219 133 ntBASIC4.09□□□□□ -1.75
NID1P14543 AC134698.5-201ENST00000519444 336 ntBASIC4.09□□□□□ -1.75
NID1P14543 CKS1BP7-201ENST00000522230 235 ntBASIC4.09□□□□□ -1.75
NID1P14543 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC4.09□□□□□ -1.75
NID1P14543 MIR5688-201ENST00000580619 83 ntBASIC4.09□□□□□ -1.75
NID1P14543 AL160290.3-201ENST00000604869 165 ntBASIC4.09□□□□□ -1.75
NID1P14543 MIR6891-201ENST00000618788 93 ntBASIC4.09□□□□□ -1.75
NID1P14543 AL445567.2-201ENST00000618935 498 ntBASIC4.09□□□□□ -1.75
NID1P14543 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
NID1P14543 U6.95-201ENST00000636931 70 ntBASIC4.09□□□□□ -1.75
NID1P14543 U2.21-201ENST00000637295 81 ntBASIC4.09□□□□□ -1.75
NID1P14543 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.09□□□□□ -1.75
NID1P14543 MFSD8-242ENST00000641690 4199 ntBASIC4.09□□□□□ -1.75
NID1P14543 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.76
NID1P14543 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.09□□□□□ -1.76
NID1P14543 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.09□□□□□ -1.76
NID1P14543 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
NID1P14543 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
NID1P14543 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
NID1P14543 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.08□□□□□ -1.76
NID1P14543 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
NID1P14543 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
NID1P14543 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
NID1P14543 RNU6-454P-201ENST00000364292 107 ntBASIC4.08□□□□□ -1.76
NID1P14543 Y_RNA.251-201ENST00000364551 99 ntBASIC4.08□□□□□ -1.76
NID1P14543 RNU6-335P-201ENST00000364563 113 ntBASIC4.08□□□□□ -1.76
NID1P14543 RNU6-728P-201ENST00000365375 104 ntBASIC4.08□□□□□ -1.76
NID1P14543 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
NID1P14543 RNU6-1228P-201ENST00000391014 107 ntBASIC4.08□□□□□ -1.76
NID1P14543 SNORA75.5-201ENST00000391291 81 ntBASIC4.08□□□□□ -1.76
NID1P14543 FTH1P15-201ENST00000406984 280 ntBASIC4.08□□□□□ -1.76
NID1P14543 HMGN2P30-201ENST00000423237 256 ntBASIC4.08□□□□□ -1.76
NID1P14543 AC092047.1-201ENST00000424997 240 ntBASIC4.08□□□□□ -1.76
NID1P14543 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
NID1P14543 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC4.08□□□□□ -1.76
NID1P14543 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.08□□□□□ -1.76
NID1P14543 RN7SKP21-201ENST00000516503 220 ntBASIC4.08□□□□□ -1.76
NID1P14543 RNU6-107P-201ENST00000516643 102 ntBASIC4.08□□□□□ -1.76
NID1P14543 AL021997.2-201ENST00000615674 271 ntBASIC4.08□□□□□ -1.76
NID1P14543 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
NID1P14543 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
NID1P14543 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
NID1P14543 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
NID1P14543 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4.08□□□□□ -1.76
NID1P14543 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.07□□□□□ -1.76
NID1P14543 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
NID1P14543 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
NID1P14543 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.07□□□□□ -1.76
NID1P14543 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC4.07□□□□□ -1.76
NID1P14543 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
NID1P14543 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC4.07□□□□□ -1.76
NID1P14543 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
NID1P14543 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
NID1P14543 RNU6-235P-201ENST00000362644 107 ntBASIC4.07□□□□□ -1.76
NID1P14543 RNU6-778P-201ENST00000363269 103 ntBASIC4.07□□□□□ -1.76
NID1P14543 RNU6-1205P-201ENST00000363625 106 ntBASIC4.07□□□□□ -1.76
NID1P14543 RNU1-73P-201ENST00000383971 164 ntBASIC4.07□□□□□ -1.76
NID1P14543 MIR325-201ENST00000385260 98 ntBASIC4.07□□□□□ -1.76
NID1P14543 MT-TT-201ENST00000387460 66 ntBASIC4.07□□□□□ -1.76
NID1P14543 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
NID1P14543 AL031003.1-201ENST00000404229 172 ntBASIC4.07□□□□□ -1.76
NID1P14543 AL606845.1-201ENST00000404881 255 ntBASIC4.07□□□□□ -1.76
NID1P14543 AC063976.4-201ENST00000421971 163 ntBASIC4.07□□□□□ -1.76
NID1P14543 AC019205.3-201ENST00000424573 156 ntBASIC4.07□□□□□ -1.76
NID1P14543 RPL39P29-201ENST00000447779 157 ntBASIC4.07□□□□□ -1.76
NID1P14543 AC012308.1-201ENST00000451232 178 ntBASIC4.07□□□□□ -1.76
NID1P14543 snoU13.4-201ENST00000458916 104 ntBASIC4.07□□□□□ -1.76
NID1P14543 snoU13.24-201ENST00000458998 104 ntBASIC4.07□□□□□ -1.76
NID1P14543 RPS26P28-201ENST00000470806 348 ntBASIC4.07□□□□□ -1.76
NID1P14543 AC109327.1-201ENST00000471666 403 ntBASIC4.07□□□□□ -1.76
NID1P14543 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC4.07□□□□□ -1.76
NID1P14543 RNU6-772P-201ENST00000516042 105 ntBASIC4.07□□□□□ -1.76
NID1P14543 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.07□□□□□ -1.76
NID1P14543 Y_RNA.757-201ENST00000578934 114 ntBASIC4.07□□□□□ -1.76
NID1P14543 SNRPGP20-201ENST00000604477 205 ntBASIC4.07□□□□□ -1.76
NID1P14543 FTX_3.1-201ENST00000610451 147 ntBASIC4.07□□□□□ -1.76
NID1P14543 FTO-223ENST00000640179 210 ntTSL 5 BASIC4.07□□□□□ -1.76
NID1P14543 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
NID1P14543 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.07□□□□□ -1.76
NID1P14543 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
NID1P14543 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
NID1P14543 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
NID1P14543 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
NID1P14543 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
NID1P14543 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
NID1P14543 AL133412.1-201ENST00000380194 2992 ntBASIC4.06□□□□□ -1.76
NID1P14543 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.06□□□□□ -1.76
NID1P14543 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
NID1P14543 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 113.1 ms