Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 MIR338-201ENST00000636369 67 ntBASIC0.73□□□□□ -2.29
COL1A1P02452 ELL2P3-201ENST00000457883 1602 ntBASIC0.73□□□□□ -2.29
COL1A1P02452 RNU6-1284P-201ENST00000363701 100 ntBASIC0.72□□□□□ -2.29
COL1A1P02452 AL359634.1-202ENST00000404721 284 ntBASIC0.72□□□□□ -2.29
COL1A1P02452 MIR320C1-201ENST00000408566 88 ntBASIC0.72□□□□□ -2.29
COL1A1P02452 MTCO1P17-201ENST00000411522 491 ntBASIC0.72□□□□□ -2.29
COL1A1P02452 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC0.72□□□□□ -2.29
COL1A1P02452 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC0.72□□□□□ -2.29
COL1A1P02452 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC0.72□□□□□ -2.29
COL1A1P02452 AL953862.1-201ENST00000423016 168 ntBASIC0.72□□□□□ -2.29
COL1A1P02452 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC0.72□□□□□ -2.29
COL1A1P02452 BTBD7P2-201ENST00000441962 620 ntBASIC0.72□□□□□ -2.29
COL1A1P02452 MTCO2P25-201ENST00000447065 681 ntBASIC0.72□□□□□ -2.29
COL1A1P02452 RPL39P28-201ENST00000465655 155 ntBASIC0.72□□□□□ -2.29
COL1A1P02452 HMGN1P10-201ENST00000474557 553 ntBASIC0.72□□□□□ -2.29
COL1A1P02452 AC010409.1-201ENST00000487382 476 ntBASIC0.72□□□□□ -2.29
COL1A1P02452 LAMTOR3P2-201ENST00000504479 232 ntBASIC0.72□□□□□ -2.29
COL1A1P02452 RNY4P37-201ENST00000516225 96 ntBASIC0.72□□□□□ -2.29
COL1A1P02452 RNU2-53P-201ENST00000516257 147 ntBASIC0.72□□□□□ -2.29
COL1A1P02452 AP003355.1-201ENST00000518956 587 ntBASIC0.72□□□□□ -2.29
COL1A1P02452 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC0.72□□□□□ -2.29
COL1A1P02452 AC022616.8-201ENST00000533569 253 ntBASIC0.72□□□□□ -2.29
COL1A1P02452 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC0.72□□□□□ -2.29
COL1A1P02452 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.72□□□□□ -2.29
COL1A1P02452 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC0.72□□□□□ -2.29
COL1A1P02452 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC0.72□□□□□ -2.29
COL1A1P02452 AC098614.4-201ENST00000607601 462 ntBASIC0.72□□□□□ -2.29
COL1A1P02452 AL355472.4-201ENST00000610233 626 ntBASIC0.72□□□□□ -2.29
COL1A1P02452 uc_338.15-201ENST00000615470 191 ntBASIC0.72□□□□□ -2.29
COL1A1P02452 AC012676.2-201ENST00000619258 186 ntBASIC0.72□□□□□ -2.29
COL1A1P02452 MTND5P33-201ENST00000571250 1450 ntBASIC0.71□□□□□ -2.3
COL1A1P02452 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC0.71□□□□□ -2.3
COL1A1P02452 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC0.71□□□□□ -2.3
COL1A1P02452 RNU6-858P-201ENST00000362436 107 ntBASIC0.71□□□□□ -2.3
COL1A1P02452 RNU6-529P-201ENST00000363383 104 ntBASIC0.71□□□□□ -2.3
COL1A1P02452 RNU6-853P-201ENST00000364306 107 ntBASIC0.71□□□□□ -2.3
COL1A1P02452 RNU6-224P-201ENST00000384055 107 ntBASIC0.71□□□□□ -2.3
COL1A1P02452 RNU6-701P-201ENST00000384059 107 ntBASIC0.71□□□□□ -2.3
COL1A1P02452 MIR301A-201ENST00000385261 86 ntBASIC0.71□□□□□ -2.3
COL1A1P02452 AC119751.3-201ENST00000399720 670 ntBASIC0.71□□□□□ -2.3
COL1A1P02452 AL359704.1-201ENST00000411586 781 ntBASIC0.71□□□□□ -2.3
COL1A1P02452 AC008267.5-201ENST00000424928 265 ntBASIC0.71□□□□□ -2.3
COL1A1P02452 AC005094.1-201ENST00000440420 368 ntBASIC0.71□□□□□ -2.3
COL1A1P02452 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC0.71□□□□□ -2.3
COL1A1P02452 AC087477.1-201ENST00000465747 340 ntBASIC0.71□□□□□ -2.3
COL1A1P02452 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC0.71□□□□□ -2.3
COL1A1P02452 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC0.71□□□□□ -2.3
COL1A1P02452 RNU6-1028P-201ENST00000517164 93 ntBASIC0.71□□□□□ -2.3
COL1A1P02452 LRRC6P1-201ENST00000532188 885 ntBASIC0.71□□□□□ -2.3
COL1A1P02452 AC136619.2-201ENST00000563361 631 ntBASIC0.71□□□□□ -2.3
COL1A1P02452 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC0.71□□□□□ -2.3
COL1A1P02452 NIFKP6-201ENST00000598115 845 ntBASIC0.71□□□□□ -2.3
COL1A1P02452 AC124016.2-201ENST00000610058 665 ntBASIC0.71□□□□□ -2.3
COL1A1P02452 MIR8065-201ENST00000620577 100 ntBASIC0.71□□□□□ -2.3
COL1A1P02452 MIR6759-201ENST00000638110 65 ntBASIC0.71□□□□□ -2.3
COL1A1P02452 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC0.71□□□□□ -2.3
COL1A1P02452 RNA5SP327-201ENST00000362494 101 ntBASIC0.7□□□□□ -2.3
COL1A1P02452 RNU6-560P-201ENST00000364007 108 ntBASIC0.7□□□□□ -2.3
COL1A1P02452 RNU6-26P-201ENST00000383985 107 ntBASIC0.7□□□□□ -2.3
COL1A1P02452 RNU6-418P-201ENST00000384035 107 ntBASIC0.7□□□□□ -2.3
COL1A1P02452 MIR19A-201ENST00000384878 82 ntBASIC0.7□□□□□ -2.3
COL1A1P02452 Y_RNA.578-201ENST00000390903 88 ntBASIC0.7□□□□□ -2.3
COL1A1P02452 AC019070.1-201ENST00000415008 1024 ntBASIC0.7□□□□□ -2.3
COL1A1P02452 USP9YP21-201ENST00000420603 432 ntBASIC0.7□□□□□ -2.3
COL1A1P02452 Z99497.1-201ENST00000421282 135 ntBASIC0.7□□□□□ -2.3
COL1A1P02452 RAC1P6-201ENST00000423911 575 ntBASIC0.7□□□□□ -2.3
COL1A1P02452 RPS27P16-201ENST00000425758 201 ntBASIC0.7□□□□□ -2.3
COL1A1P02452 AC013262.1-201ENST00000426710 252 ntBASIC0.7□□□□□ -2.3
COL1A1P02452 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC0.7□□□□□ -2.3
COL1A1P02452 AC027119.1-201ENST00000440877 241 ntBASIC0.7□□□□□ -2.3
COL1A1P02452 ZNF886P-201ENST00000450781 723 ntBASIC0.7□□□□□ -2.3
COL1A1P02452 RNU6-953P-201ENST00000459154 107 ntBASIC0.7□□□□□ -2.3
COL1A1P02452 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC0.7□□□□□ -2.3
COL1A1P02452 AC113347.3-201ENST00000509113 148 ntBASIC0.7□□□□□ -2.3
COL1A1P02452 AC009902.1-201ENST00000519351 183 ntBASIC0.7□□□□□ -2.3
COL1A1P02452 TRAV32-201ENST00000553993 340 ntBASIC0.7□□□□□ -2.3
COL1A1P02452 AC012414.6-201ENST00000568241 401 ntBASIC0.7□□□□□ -2.3
COL1A1P02452 MIR4636-201ENST00000582271 80 ntBASIC0.7□□□□□ -2.3
COL1A1P02452 AC099785.1-201ENST00000605697 437 ntBASIC0.7□□□□□ -2.3
COL1A1P02452 AC004908.3-201ENST00000610248 625 ntBASIC0.7□□□□□ -2.3
COL1A1P02452 MIR8063-201ENST00000621930 81 ntBASIC0.7□□□□□ -2.3
COL1A1P02452 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC0.7□□□□□ -2.3
COL1A1P02452 RNU6-1010P-201ENST00000362757 107 ntBASIC0.69□□□□□ -2.3
COL1A1P02452 MIR1305-201ENST00000408300 86 ntBASIC0.69□□□□□ -2.3
COL1A1P02452 MIR1265-201ENST00000408444 86 ntBASIC0.69□□□□□ -2.3
COL1A1P02452 AC139712.2-201ENST00000424302 339 ntBASIC0.69□□□□□ -2.3
COL1A1P02452 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC0.69□□□□□ -2.3
COL1A1P02452 PGBD4P5-201ENST00000445958 426 ntBASIC0.69□□□□□ -2.3
COL1A1P02452 AL035666.1-201ENST00000446195 348 ntBASIC0.69□□□□□ -2.3
COL1A1P02452 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC0.69□□□□□ -2.3
COL1A1P02452 AC104629.1-201ENST00000494226 508 ntBASIC0.69□□□□□ -2.3
COL1A1P02452 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.69□□□□□ -2.3
COL1A1P02452 AL133373.1-201ENST00000497098 94 ntBASIC0.69□□□□□ -2.3
COL1A1P02452 RNU6-64P-201ENST00000517119 105 ntBASIC0.69□□□□□ -2.3
COL1A1P02452 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC0.69□□□□□ -2.3
COL1A1P02452 AP006587.4-201ENST00000526053 529 ntBASIC0.69□□□□□ -2.3
COL1A1P02452 AP003392.2-201ENST00000527269 208 ntBASIC0.69□□□□□ -2.3
COL1A1P02452 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC0.69□□□□□ -2.3
COL1A1P02452 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC0.69□□□□□ -2.3
COL1A1P02452 AC073410.2-201ENST00000603240 332 ntBASIC0.69□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms