Protein–RNA interactions for Protein: A6NJ46

NKX6-3, Homeobox protein Nkx-6.3, humanhuman

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-3A6NJ46 OR56A5-201ENST00000340110 738 ntBASIC2.2□□□□□ -2.06
NKX6-3A6NJ46 MIR6073-201ENST00000352083 89 ntBASIC2.2□□□□□ -2.06
NKX6-3A6NJ46 Y_RNA.248-201ENST00000364501 109 ntBASIC2.2□□□□□ -2.06
NKX6-3A6NJ46 Y_RNA.500-201ENST00000384466 111 ntBASIC2.2□□□□□ -2.06
NKX6-3A6NJ46 MIR196B-201ENST00000384852 84 ntBASIC2.2□□□□□ -2.06
NKX6-3A6NJ46 MIR144-201ENST00000384886 86 ntBASIC2.2□□□□□ -2.06
NKX6-3A6NJ46 MIR524-201ENST00000385242 87 ntBASIC2.2□□□□□ -2.06
NKX6-3A6NJ46 AL162578.1-201ENST00000406202 378 ntBASIC2.2□□□□□ -2.06
NKX6-3A6NJ46 RNA5SP184-201ENST00000411071 108 ntBASIC2.2□□□□□ -2.06
NKX6-3A6NJ46 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
NKX6-3A6NJ46 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.2□□□□□ -2.06
NKX6-3A6NJ46 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.2□□□□□ -2.06
NKX6-3A6NJ46 USP9YP8-201ENST00000441913 500 ntBASIC2.2□□□□□ -2.06
NKX6-3A6NJ46 RPL39P29-201ENST00000447779 157 ntBASIC2.2□□□□□ -2.06
NKX6-3A6NJ46 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC2.2□□□□□ -2.06
NKX6-3A6NJ46 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
NKX6-3A6NJ46 RNU7-26P-201ENST00000458980 63 ntBASIC2.2□□□□□ -2.06
NKX6-3A6NJ46 AC007547.1-201ENST00000462177 490 ntBASIC2.2□□□□□ -2.06
NKX6-3A6NJ46 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.2□□□□□ -2.06
NKX6-3A6NJ46 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC2.2□□□□□ -2.06
NKX6-3A6NJ46 AC109479.2-201ENST00000517842 174 ntBASIC2.2□□□□□ -2.06
NKX6-3A6NJ46 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC2.2□□□□□ -2.06
NKX6-3A6NJ46 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC2.2□□□□□ -2.06
NKX6-3A6NJ46 MIR4658-201ENST00000584344 65 ntBASIC2.2□□□□□ -2.06
NKX6-3A6NJ46 AP003465.2-201ENST00000602571 373 ntBASIC2.2□□□□□ -2.06
NKX6-3A6NJ46 ELOCP5-201ENST00000604924 333 ntBASIC2.2□□□□□ -2.06
NKX6-3A6NJ46 RNU6-91P-201ENST00000607774 107 ntBASIC2.2□□□□□ -2.06
NKX6-3A6NJ46 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC2.2□□□□□ -2.06
NKX6-3A6NJ46 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC2.2□□□□□ -2.06
NKX6-3A6NJ46 FAM157A-202ENST00000615155 405 ntBASIC2.2□□□□□ -2.06
NKX6-3A6NJ46 MIR7157-201ENST00000635801 60 ntBASIC2.2□□□□□ -2.06
NKX6-3A6NJ46 AC241585.2-209ENST00000638217 143 ntBASIC2.2□□□□□ -2.06
NKX6-3A6NJ46 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
NKX6-3A6NJ46 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
NKX6-3A6NJ46 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
NKX6-3A6NJ46 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.19□□□□□ -2.06
NKX6-3A6NJ46 Y_RNA.40-201ENST00000362645 93 ntBASIC2.19□□□□□ -2.06
NKX6-3A6NJ46 Y_RNA.86-201ENST00000363020 111 ntBASIC2.19□□□□□ -2.06
NKX6-3A6NJ46 SNORA80E-201ENST00000384744 137 ntBASIC2.19□□□□□ -2.06
NKX6-3A6NJ46 MIR186-201ENST00000384988 86 ntBASIC2.19□□□□□ -2.06
NKX6-3A6NJ46 RNU6-373P-201ENST00000411247 98 ntBASIC2.19□□□□□ -2.06
NKX6-3A6NJ46 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC2.19□□□□□ -2.06
NKX6-3A6NJ46 AC008267.5-201ENST00000424928 265 ntBASIC2.19□□□□□ -2.06
NKX6-3A6NJ46 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC2.19□□□□□ -2.06
NKX6-3A6NJ46 AC243964.1-201ENST00000441814 261 ntBASIC2.19□□□□□ -2.06
NKX6-3A6NJ46 AC007969.2-201ENST00000441891 191 ntBASIC2.19□□□□□ -2.06
NKX6-3A6NJ46 AC092436.3-201ENST00000511788 257 ntBASIC2.19□□□□□ -2.06
NKX6-3A6NJ46 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC2.19□□□□□ -2.06
NKX6-3A6NJ46 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC2.19□□□□□ -2.06
NKX6-3A6NJ46 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC2.19□□□□□ -2.06
NKX6-3A6NJ46 IGLV3-17-201ENST00000519099 244 ntBASIC2.19□□□□□ -2.06
NKX6-3A6NJ46 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC2.19□□□□□ -2.06
NKX6-3A6NJ46 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC2.19□□□□□ -2.06
NKX6-3A6NJ46 MIR5092-201ENST00000583139 88 ntBASIC2.19□□□□□ -2.06
NKX6-3A6NJ46 AC009314.1-201ENST00000603871 304 ntBASIC2.19□□□□□ -2.06
NKX6-3A6NJ46 AC002553.4-201ENST00000616896 331 ntBASIC2.19□□□□□ -2.06
NKX6-3A6NJ46 AC024581.2-201ENST00000619986 252 ntBASIC2.19□□□□□ -2.06
NKX6-3A6NJ46 AC090517.3-201ENST00000625170 141 ntBASIC2.19□□□□□ -2.06
NKX6-3A6NJ46 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.19□□□□□ -2.06
NKX6-3A6NJ46 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.19□□□□□ -2.06
NKX6-3A6NJ46 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
NKX6-3A6NJ46 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.18□□□□□ -2.06
NKX6-3A6NJ46 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
NKX6-3A6NJ46 RNU6-254P-201ENST00000363377 107 ntBASIC2.18□□□□□ -2.06
NKX6-3A6NJ46 RNA5SP125-201ENST00000364843 120 ntBASIC2.18□□□□□ -2.06
NKX6-3A6NJ46 RNU1-52P-201ENST00000384190 164 ntBASIC2.18□□□□□ -2.06
NKX6-3A6NJ46 RNU1-57P-201ENST00000384491 166 ntBASIC2.18□□□□□ -2.06
NKX6-3A6NJ46 RNA5SP210-201ENST00000391034 120 ntBASIC2.18□□□□□ -2.06
NKX6-3A6NJ46 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
NKX6-3A6NJ46 RNU6-1148P-201ENST00000410992 104 ntBASIC2.18□□□□□ -2.06
NKX6-3A6NJ46 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.18□□□□□ -2.06
NKX6-3A6NJ46 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC2.18□□□□□ -2.06
NKX6-3A6NJ46 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.18□□□□□ -2.06
NKX6-3A6NJ46 EIF4EP4-201ENST00000424916 578 ntBASIC2.18□□□□□ -2.06
NKX6-3A6NJ46 MICF-203ENST00000432679 129 ntBASIC2.18□□□□□ -2.06
NKX6-3A6NJ46 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.18□□□□□ -2.06
NKX6-3A6NJ46 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC2.18□□□□□ -2.06
NKX6-3A6NJ46 AC108938.1-201ENST00000451204 136 ntBASIC2.18□□□□□ -2.06
NKX6-3A6NJ46 AL109933.2-201ENST00000452651 260 ntBASIC2.18□□□□□ -2.06
NKX6-3A6NJ46 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.18□□□□□ -2.06
NKX6-3A6NJ46 RPS29P25-201ENST00000481709 171 ntBASIC2.18□□□□□ -2.06
NKX6-3A6NJ46 CKS1BP2-201ENST00000497342 240 ntBASIC2.18□□□□□ -2.06
NKX6-3A6NJ46 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.18□□□□□ -2.06
NKX6-3A6NJ46 RNU2-53P-201ENST00000516257 147 ntBASIC2.18□□□□□ -2.06
NKX6-3A6NJ46 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.18□□□□□ -2.06
NKX6-3A6NJ46 CBX3P7-201ENST00000532876 502 ntBASIC2.18□□□□□ -2.06
NKX6-3A6NJ46 AC121758.2-201ENST00000553271 193 ntBASIC2.18□□□□□ -2.06
NKX6-3A6NJ46 MIR3616-201ENST00000584070 92 ntBASIC2.18□□□□□ -2.06
NKX6-3A6NJ46 RPL30P11-203ENST00000598995 310 ntBASIC2.18□□□□□ -2.06
NKX6-3A6NJ46 MIR6895-201ENST00000613497 78 ntBASIC2.18□□□□□ -2.06
NKX6-3A6NJ46 AC093913.1-201ENST00000614178 329 ntBASIC2.18□□□□□ -2.06
NKX6-3A6NJ46 uc_338.15-201ENST00000615470 191 ntBASIC2.18□□□□□ -2.06
NKX6-3A6NJ46 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.18□□□□□ -2.06
NKX6-3A6NJ46 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.18□□□□□ -2.06
NKX6-3A6NJ46 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.18□□□□□ -2.06
NKX6-3A6NJ46 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
NKX6-3A6NJ46 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.17□□□□□ -2.06
NKX6-3A6NJ46 HAUS6P2-201ENST00000433254 2404 ntBASIC2.17□□□□□ -2.06
NKX6-3A6NJ46 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
NKX6-3A6NJ46 RNU6-487P-201ENST00000365430 104 ntBASIC2.17□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 136.4 ms