Protein–RNA interactions for Protein: A0A0B4J280

TRAV40, T-cell receptor alpha variable 40 (Fragment), humanhuman

Predictions only

Length 105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40A0A0B4J280 AP001330.5-201ENST00000607176 411 ntBASIC1.56□□□□□ -2.16
TRAV40A0A0B4J280 AC064807.4-201ENST00000607201 407 ntBASIC1.56□□□□□ -2.16
TRAV40A0A0B4J280 RMST_4.1-201ENST00000616886 107 ntBASIC1.56□□□□□ -2.16
TRAV40A0A0B4J280 U6.42-201ENST00000618440 107 ntBASIC1.56□□□□□ -2.16
TRAV40A0A0B4J280 AC098657.3-201ENST00000620434 263 ntBASIC1.56□□□□□ -2.16
TRAV40A0A0B4J280 AL359880.1-201ENST00000621879 266 ntBASIC1.56□□□□□ -2.16
TRAV40A0A0B4J280 RMST_7.1-201ENST00000621935 268 ntBASIC1.56□□□□□ -2.16
TRAV40A0A0B4J280 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.56□□□□□ -2.16
TRAV40A0A0B4J280 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
TRAV40A0A0B4J280 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
TRAV40A0A0B4J280 AL109809.4-201ENST00000603520 2185 ntBASIC1.55□□□□□ -2.16
TRAV40A0A0B4J280 AC138393.1-203ENST00000327086 343 ntBASIC1.55□□□□□ -2.16
TRAV40A0A0B4J280 Y_RNA.40-201ENST00000362645 93 ntBASIC1.55□□□□□ -2.16
TRAV40A0A0B4J280 RNU6-529P-201ENST00000363383 104 ntBASIC1.55□□□□□ -2.16
TRAV40A0A0B4J280 Y_RNA.255-201ENST00000364581 97 ntBASIC1.55□□□□□ -2.16
TRAV40A0A0B4J280 RNA5SP125-201ENST00000364843 120 ntBASIC1.55□□□□□ -2.16
TRAV40A0A0B4J280 Y_RNA.324-201ENST00000365165 102 ntBASIC1.55□□□□□ -2.16
TRAV40A0A0B4J280 SNORA69-201ENST00000383895 132 ntBASIC1.55□□□□□ -2.16
TRAV40A0A0B4J280 RNU6-483P-201ENST00000384088 108 ntBASIC1.55□□□□□ -2.16
TRAV40A0A0B4J280 RNU6-393P-201ENST00000384475 107 ntBASIC1.55□□□□□ -2.16
TRAV40A0A0B4J280 SNORD116-20-201ENST00000384529 92 ntBASIC1.55□□□□□ -2.16
TRAV40A0A0B4J280 RNU6-387P-201ENST00000411331 105 ntBASIC1.55□□□□□ -2.16
TRAV40A0A0B4J280 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC1.55□□□□□ -2.16
TRAV40A0A0B4J280 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC1.55□□□□□ -2.16
TRAV40A0A0B4J280 HMGB1P31-201ENST00000437242 427 ntBASIC1.55□□□□□ -2.16
TRAV40A0A0B4J280 PRPS1P1-201ENST00000445305 876 ntBASIC1.55□□□□□ -2.16
TRAV40A0A0B4J280 AC022364.2-201ENST00000457963 554 ntBASIC1.55□□□□□ -2.16
TRAV40A0A0B4J280 AC117503.1-201ENST00000472241 394 ntBASIC1.55□□□□□ -2.16
TRAV40A0A0B4J280 MTAPP1-201ENST00000489154 819 ntBASIC1.55□□□□□ -2.16
TRAV40A0A0B4J280 AC104564.1-201ENST00000493028 407 ntBASIC1.55□□□□□ -2.16
TRAV40A0A0B4J280 AC074344.1-201ENST00000512823 224 ntBASIC1.55□□□□□ -2.16
TRAV40A0A0B4J280 RNA5SP182-201ENST00000516064 82 ntBASIC1.55□□□□□ -2.16
TRAV40A0A0B4J280 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC1.55□□□□□ -2.16
TRAV40A0A0B4J280 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC1.55□□□□□ -2.16
TRAV40A0A0B4J280 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.55□□□□□ -2.16
TRAV40A0A0B4J280 ANP32BP3-201ENST00000559213 706 ntBASIC1.55□□□□□ -2.16
TRAV40A0A0B4J280 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC1.55□□□□□ -2.16
TRAV40A0A0B4J280 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC1.55□□□□□ -2.16
TRAV40A0A0B4J280 MIR4765-201ENST00000585007 77 ntBASIC1.55□□□□□ -2.16
TRAV40A0A0B4J280 AC025165.5-201ENST00000602802 578 ntBASIC1.55□□□□□ -2.16
TRAV40A0A0B4J280 AL356280.1-201ENST00000603614 379 ntBASIC1.55□□□□□ -2.16
TRAV40A0A0B4J280 AL670379.10-201ENST00000604330 253 ntBASIC1.55□□□□□ -2.16
TRAV40A0A0B4J280 AL670379.9-201ENST00000605428 253 ntBASIC1.55□□□□□ -2.16
TRAV40A0A0B4J280 AC093788.1-201ENST00000609356 927 ntBASIC1.55□□□□□ -2.16
TRAV40A0A0B4J280 HMGB1P24-202ENST00000615653 685 ntBASIC1.55□□□□□ -2.16
TRAV40A0A0B4J280 uc_338.20-201ENST00000621563 178 ntBASIC1.55□□□□□ -2.16
TRAV40A0A0B4J280 ZNF72P-201ENST00000425869 1908 ntBASIC1.54□□□□□ -2.16
TRAV40A0A0B4J280 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
TRAV40A0A0B4J280 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.54□□□□□ -2.16
TRAV40A0A0B4J280 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC1.54□□□□□ -2.16
TRAV40A0A0B4J280 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC1.54□□□□□ -2.16
TRAV40A0A0B4J280 Y_RNA.38-201ENST00000362617 102 ntBASIC1.54□□□□□ -2.16
TRAV40A0A0B4J280 RNU6-78P-201ENST00000362897 107 ntBASIC1.54□□□□□ -2.16
TRAV40A0A0B4J280 RNU6-428P-201ENST00000362942 107 ntBASIC1.54□□□□□ -2.16
TRAV40A0A0B4J280 Y_RNA.378-201ENST00000365652 113 ntBASIC1.54□□□□□ -2.16
TRAV40A0A0B4J280 RNU6-38P-201ENST00000384085 107 ntBASIC1.54□□□□□ -2.16
TRAV40A0A0B4J280 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
TRAV40A0A0B4J280 RNU4-46P-201ENST00000410818 138 ntBASIC1.54□□□□□ -2.16
TRAV40A0A0B4J280 RNU2-25P-201ENST00000411041 191 ntBASIC1.54□□□□□ -2.16
TRAV40A0A0B4J280 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC1.54□□□□□ -2.16
TRAV40A0A0B4J280 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC1.54□□□□□ -2.16
TRAV40A0A0B4J280 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC1.54□□□□□ -2.16
TRAV40A0A0B4J280 RPS3AP44-201ENST00000425466 790 ntBASIC1.54□□□□□ -2.16
TRAV40A0A0B4J280 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC1.54□□□□□ -2.16
TRAV40A0A0B4J280 AL121601.2-201ENST00000438019 707 ntBASIC1.54□□□□□ -2.16
TRAV40A0A0B4J280 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC1.54□□□□□ -2.16
TRAV40A0A0B4J280 AC003071.1-201ENST00000451219 789 ntBASIC1.54□□□□□ -2.16
TRAV40A0A0B4J280 RNU7-26P-201ENST00000458980 63 ntBASIC1.54□□□□□ -2.16
TRAV40A0A0B4J280 RNU6-333P-201ENST00000459117 107 ntBASIC1.54□□□□□ -2.16
TRAV40A0A0B4J280 SRRM1P2-201ENST00000464531 1192 ntBASIC1.54□□□□□ -2.16
TRAV40A0A0B4J280 MED28P2-201ENST00000475771 317 ntBASIC1.54□□□□□ -2.16
TRAV40A0A0B4J280 AC091435.1-201ENST00000505442 584 ntBASIC1.54□□□□□ -2.16
TRAV40A0A0B4J280 AC023141.11-201ENST00000508864 202 ntBASIC1.54□□□□□ -2.16
TRAV40A0A0B4J280 AC010493.1-201ENST00000513479 292 ntBASIC1.54□□□□□ -2.16
TRAV40A0A0B4J280 AC105417.1-201ENST00000514691 285 ntBASIC1.54□□□□□ -2.16
TRAV40A0A0B4J280 Y_RNA.655-201ENST00000515919 96 ntBASIC1.54□□□□□ -2.16
TRAV40A0A0B4J280 RNU4ATAC8P-201ENST00000516196 109 ntBASIC1.54□□□□□ -2.16
TRAV40A0A0B4J280 AL138976.2-201ENST00000563989 694 ntBASIC1.54□□□□□ -2.16
TRAV40A0A0B4J280 MIR5692A1-201ENST00000580523 69 ntBASIC1.54□□□□□ -2.16
TRAV40A0A0B4J280 MIR3935-201ENST00000583472 104 ntBASIC1.54□□□□□ -2.16
TRAV40A0A0B4J280 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC1.54□□□□□ -2.16
TRAV40A0A0B4J280 HULC.1-201ENST00000612720 240 ntBASIC1.54□□□□□ -2.16
TRAV40A0A0B4J280 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.54□□□□□ -2.16
TRAV40A0A0B4J280 AC099654.12-201ENST00000639868 649 ntBASIC1.54□□□□□ -2.16
TRAV40A0A0B4J280 Z75746.1-201ENST00000440243 2080 ntBASIC1.54□□□□□ -2.16
TRAV40A0A0B4J280 SNORD56.1-201ENST00000362913 68 ntBASIC1.53□□□□□ -2.16
TRAV40A0A0B4J280 Y_RNA.167-201ENST00000363735 109 ntBASIC1.53□□□□□ -2.16
TRAV40A0A0B4J280 RNU6-266P-201ENST00000364225 107 ntBASIC1.53□□□□□ -2.16
TRAV40A0A0B4J280 RNU6-1083P-201ENST00000384022 107 ntBASIC1.53□□□□□ -2.16
TRAV40A0A0B4J280 RNU6-517P-201ENST00000384362 110 ntBASIC1.53□□□□□ -2.16
TRAV40A0A0B4J280 SNORD73A-201ENST00000386062 65 ntBASIC1.53□□□□□ -2.16
TRAV40A0A0B4J280 RNU6-648P-201ENST00000410190 107 ntBASIC1.53□□□□□ -2.16
TRAV40A0A0B4J280 RNU2-29P-201ENST00000410423 189 ntBASIC1.53□□□□□ -2.16
TRAV40A0A0B4J280 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.53□□□□□ -2.16
TRAV40A0A0B4J280 ACTR3BP6-201ENST00000422332 1241 ntBASIC1.53□□□□□ -2.16
TRAV40A0A0B4J280 AC008267.5-201ENST00000424928 265 ntBASIC1.53□□□□□ -2.16
TRAV40A0A0B4J280 MTND4P14-201ENST00000435799 1354 ntBASIC1.53□□□□□ -2.16
TRAV40A0A0B4J280 AC007677.1-201ENST00000445757 515 ntBASIC1.53□□□□□ -2.16
TRAV40A0A0B4J280 MTND4P27-201ENST00000450813 1354 ntBASIC1.53□□□□□ -2.16
TRAV40A0A0B4J280 SNRPFP3-201ENST00000457792 225 ntBASIC1.53□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms