Protein–RNA interactions for Protein: S4R434

TMEM56-RWDD3, TMEM56-RWDD3 readthrough, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56-RWDD3S4R434 RN7SKP219-201ENST00000516825 296 ntBASIC0.8□□□□□ -2.28
TMEM56-RWDD3S4R434 RNU6-1092P-201ENST00000516955 87 ntBASIC0.8□□□□□ -2.28
TMEM56-RWDD3S4R434 AC091163.3-201ENST00000518269 1144 ntBASIC0.8□□□□□ -2.28
TMEM56-RWDD3S4R434 MIR4661-201ENST00000582720 75 ntBASIC0.8□□□□□ -2.28
TMEM56-RWDD3S4R434 AP003465.2-201ENST00000602571 373 ntBASIC0.8□□□□□ -2.28
TMEM56-RWDD3S4R434 AL391646.1-201ENST00000603860 190 ntBASIC0.8□□□□□ -2.28
TMEM56-RWDD3S4R434 AL138889.2-201ENST00000603883 242 ntBASIC0.8□□□□□ -2.28
TMEM56-RWDD3S4R434 AC090578.1-201ENST00000604955 591 ntBASIC0.8□□□□□ -2.28
TMEM56-RWDD3S4R434 AC126544.2-201ENST00000625174 749 ntBASIC0.8□□□□□ -2.28
TMEM56-RWDD3S4R434 AC099654.5-201ENST00000636479 350 ntBASIC0.8□□□□□ -2.28
TMEM56-RWDD3S4R434 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
TMEM56-RWDD3S4R434 MTND5P35-201ENST00000557537 1720 ntBASIC0.79□□□□□ -2.28
TMEM56-RWDD3S4R434 Y_RNA.255-201ENST00000364581 97 ntBASIC0.79□□□□□ -2.28
TMEM56-RWDD3S4R434 RNU5E-6P-201ENST00000365574 115 ntBASIC0.79□□□□□ -2.28
TMEM56-RWDD3S4R434 RNU6-769P-201ENST00000384407 104 ntBASIC0.79□□□□□ -2.28
TMEM56-RWDD3S4R434 MIR520A-201ENST00000384862 85 ntBASIC0.79□□□□□ -2.28
TMEM56-RWDD3S4R434 RPS3AP36-201ENST00000398190 775 ntBASIC0.79□□□□□ -2.28
TMEM56-RWDD3S4R434 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC0.79□□□□□ -2.28
TMEM56-RWDD3S4R434 BTF3L4P1-201ENST00000413813 468 ntBASIC0.79□□□□□ -2.28
TMEM56-RWDD3S4R434 POLR2J4-204ENST00000418424 324 ntBASIC0.79□□□□□ -2.28
TMEM56-RWDD3S4R434 SNRPEP10-201ENST00000420249 274 ntBASIC0.79□□□□□ -2.28
TMEM56-RWDD3S4R434 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC0.79□□□□□ -2.28
TMEM56-RWDD3S4R434 FTH1P25-201ENST00000447665 469 ntBASIC0.79□□□□□ -2.28
TMEM56-RWDD3S4R434 AL122001.1-201ENST00000457027 370 ntBASIC0.79□□□□□ -2.28
TMEM56-RWDD3S4R434 AC006026.2-201ENST00000457376 180 ntBASIC0.79□□□□□ -2.28
TMEM56-RWDD3S4R434 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC0.79□□□□□ -2.28
TMEM56-RWDD3S4R434 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC0.79□□□□□ -2.28
TMEM56-RWDD3S4R434 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC0.79□□□□□ -2.28
TMEM56-RWDD3S4R434 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC0.79□□□□□ -2.28
TMEM56-RWDD3S4R434 AC112206.3-201ENST00000514578 389 ntBASIC0.79□□□□□ -2.28
TMEM56-RWDD3S4R434 RNA5SP437-201ENST00000517249 129 ntBASIC0.79□□□□□ -2.28
TMEM56-RWDD3S4R434 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC0.79□□□□□ -2.28
TMEM56-RWDD3S4R434 BNIP3P6-201ENST00000549284 499 ntBASIC0.79□□□□□ -2.28
TMEM56-RWDD3S4R434 AC015688.6-201ENST00000577737 104 ntBASIC0.79□□□□□ -2.28
TMEM56-RWDD3S4R434 AC091135.1-201ENST00000585943 307 ntBASIC0.79□□□□□ -2.28
TMEM56-RWDD3S4R434 BNIP3P31-201ENST00000604515 566 ntBASIC0.79□□□□□ -2.28
TMEM56-RWDD3S4R434 MIR8065-201ENST00000620577 100 ntBASIC0.79□□□□□ -2.28
TMEM56-RWDD3S4R434 AL391987.6-201ENST00000305671 199 ntBASIC0.78□□□□□ -2.28
TMEM56-RWDD3S4R434 RNU1-124P-201ENST00000363861 145 ntBASIC0.78□□□□□ -2.28
TMEM56-RWDD3S4R434 RNU6-968P-201ENST00000384076 107 ntBASIC0.78□□□□□ -2.28
TMEM56-RWDD3S4R434 RNU6-413P-201ENST00000384115 107 ntBASIC0.78□□□□□ -2.28
TMEM56-RWDD3S4R434 RNU6-1065P-201ENST00000384513 106 ntBASIC0.78□□□□□ -2.28
TMEM56-RWDD3S4R434 RNU2-7P-201ENST00000410794 178 ntBASIC0.78□□□□□ -2.28
TMEM56-RWDD3S4R434 RNU2-62P-201ENST00000410868 191 ntBASIC0.78□□□□□ -2.28
TMEM56-RWDD3S4R434 AC004965.1-201ENST00000413033 213 ntBASIC0.78□□□□□ -2.28
TMEM56-RWDD3S4R434 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC0.78□□□□□ -2.28
TMEM56-RWDD3S4R434 AL161935.2-201ENST00000414627 60 ntBASIC0.78□□□□□ -2.28
TMEM56-RWDD3S4R434 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC0.78□□□□□ -2.28
TMEM56-RWDD3S4R434 AC007327.1-201ENST00000447461 264 ntBASIC0.78□□□□□ -2.28
TMEM56-RWDD3S4R434 AC114982.1-201ENST00000469402 321 ntBASIC0.78□□□□□ -2.28
TMEM56-RWDD3S4R434 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC0.78□□□□□ -2.28
TMEM56-RWDD3S4R434 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC0.78□□□□□ -2.28
TMEM56-RWDD3S4R434 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC0.78□□□□□ -2.28
TMEM56-RWDD3S4R434 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC0.78□□□□□ -2.28
TMEM56-RWDD3S4R434 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC0.78□□□□□ -2.28
TMEM56-RWDD3S4R434 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC0.78□□□□□ -2.28
TMEM56-RWDD3S4R434 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC0.78□□□□□ -2.28
TMEM56-RWDD3S4R434 MIR544B-201ENST00000582372 78 ntBASIC0.78□□□□□ -2.28
TMEM56-RWDD3S4R434 AL136363.2-201ENST00000604173 851 ntBASIC0.78□□□□□ -2.28
TMEM56-RWDD3S4R434 BCRP9-201ENST00000605312 388 ntBASIC0.78□□□□□ -2.28
TMEM56-RWDD3S4R434 AP000943.4-201ENST00000622912 357 ntBASIC0.78□□□□□ -2.28
TMEM56-RWDD3S4R434 AC009033.1-201ENST00000624279 431 ntBASIC0.78□□□□□ -2.28
TMEM56-RWDD3S4R434 RNU6-511P-201ENST00000363496 107 ntBASIC0.77□□□□□ -2.29
TMEM56-RWDD3S4R434 Y_RNA.472-201ENST00000384322 102 ntBASIC0.77□□□□□ -2.29
TMEM56-RWDD3S4R434 AP1B1P2-201ENST00000416196 106 ntBASIC0.77□□□□□ -2.29
TMEM56-RWDD3S4R434 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC0.77□□□□□ -2.29
TMEM56-RWDD3S4R434 TXNL1P1-201ENST00000429528 554 ntBASIC0.77□□□□□ -2.29
TMEM56-RWDD3S4R434 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC0.77□□□□□ -2.29
TMEM56-RWDD3S4R434 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC0.77□□□□□ -2.29
TMEM56-RWDD3S4R434 SUMO2P18-201ENST00000518873 252 ntBASIC0.77□□□□□ -2.29
TMEM56-RWDD3S4R434 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC0.77□□□□□ -2.29
TMEM56-RWDD3S4R434 MIR3146-201ENST00000580367 79 ntBASIC0.77□□□□□ -2.29
TMEM56-RWDD3S4R434 AL353778.1-201ENST00000603149 408 ntBASIC0.77□□□□□ -2.29
TMEM56-RWDD3S4R434 RNU6-88P-201ENST00000606801 100 ntBASIC0.77□□□□□ -2.29
TMEM56-RWDD3S4R434 AC091965.4-201ENST00000607691 587 ntBASIC0.77□□□□□ -2.29
TMEM56-RWDD3S4R434 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC0.77□□□□□ -2.29
TMEM56-RWDD3S4R434 U6.42-201ENST00000618440 107 ntBASIC0.77□□□□□ -2.29
TMEM56-RWDD3S4R434 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC0.77□□□□□ -2.29
TMEM56-RWDD3S4R434 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC0.77□□□□□ -2.29
TMEM56-RWDD3S4R434 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC0.77□□□□□ -2.29
TMEM56-RWDD3S4R434 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC0.77□□□□□ -2.29
TMEM56-RWDD3S4R434 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC0.77□□□□□ -2.29
TMEM56-RWDD3S4R434 Y_RNA.140-201ENST00000363474 103 ntBASIC0.76□□□□□ -2.29
TMEM56-RWDD3S4R434 Y_RNA.192-201ENST00000363977 102 ntBASIC0.76□□□□□ -2.29
TMEM56-RWDD3S4R434 SNORD32B-201ENST00000364460 84 ntBASIC0.76□□□□□ -2.29
TMEM56-RWDD3S4R434 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC0.76□□□□□ -2.29
TMEM56-RWDD3S4R434 RPS15AP12-201ENST00000419498 388 ntBASIC0.76□□□□□ -2.29
TMEM56-RWDD3S4R434 AC123900.1-201ENST00000420390 96 ntBASIC0.76□□□□□ -2.29
TMEM56-RWDD3S4R434 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC0.76□□□□□ -2.29
TMEM56-RWDD3S4R434 AC132479.1-201ENST00000449160 144 ntBASIC0.76□□□□□ -2.29
TMEM56-RWDD3S4R434 SNRPFP4-201ENST00000456366 242 ntBASIC0.76□□□□□ -2.29
TMEM56-RWDD3S4R434 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC0.76□□□□□ -2.29
TMEM56-RWDD3S4R434 AL163195.1-201ENST00000496941 348 ntBASIC0.76□□□□□ -2.29
TMEM56-RWDD3S4R434 AC005741.1-201ENST00000511094 432 ntBASIC0.76□□□□□ -2.29
TMEM56-RWDD3S4R434 AC112198.4-201ENST00000515450 351 ntBASIC0.76□□□□□ -2.29
TMEM56-RWDD3S4R434 RNU5F-2P-201ENST00000516066 82 ntBASIC0.76□□□□□ -2.29
TMEM56-RWDD3S4R434 RNU5A-4P-201ENST00000516588 111 ntBASIC0.76□□□□□ -2.29
TMEM56-RWDD3S4R434 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC0.76□□□□□ -2.29
TMEM56-RWDD3S4R434 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC0.76□□□□□ -2.29
TMEM56-RWDD3S4R434 UBE2Q2P8-201ENST00000560644 102 ntBASIC0.76□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms