Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 OR11H5P-201ENST00000554039 926 ntBASIC2.64□□□□□ -1.99
BLOC1S4Q9NUP1 MIR5583-1-201ENST00000580941 59 ntBASIC2.64□□□□□ -1.99
BLOC1S4Q9NUP1 AL161423.1-201ENST00000613700 262 ntBASIC2.64□□□□□ -1.99
BLOC1S4Q9NUP1 CTSLP2-204ENST00000629029 392 ntBASIC2.64□□□□□ -1.99
BLOC1S4Q9NUP1 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.64□□□□□ -1.99
BLOC1S4Q9NUP1 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
BLOC1S4Q9NUP1 Y_RNA.40-201ENST00000362645 93 ntBASIC2.63□□□□□ -1.99
BLOC1S4Q9NUP1 RNU6-336P-201ENST00000364891 107 ntBASIC2.63□□□□□ -1.99
BLOC1S4Q9NUP1 SNORA25B-201ENST00000365507 128 ntBASIC2.63□□□□□ -1.99
BLOC1S4Q9NUP1 Y_RNA.409-201ENST00000383990 98 ntBASIC2.63□□□□□ -1.99
BLOC1S4Q9NUP1 RNA5SP219-201ENST00000390940 113 ntBASIC2.63□□□□□ -1.99
BLOC1S4Q9NUP1 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.63□□□□□ -1.99
BLOC1S4Q9NUP1 RPL17P50-201ENST00000396131 546 ntBASIC2.63□□□□□ -1.99
BLOC1S4Q9NUP1 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
BLOC1S4Q9NUP1 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC2.63□□□□□ -1.99
BLOC1S4Q9NUP1 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.63□□□□□ -1.99
BLOC1S4Q9NUP1 MTCO3P41-201ENST00000414801 328 ntBASIC2.63□□□□□ -1.99
BLOC1S4Q9NUP1 MORF4L1P6-201ENST00000418771 268 ntBASIC2.63□□□□□ -1.99
BLOC1S4Q9NUP1 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC2.63□□□□□ -1.99
BLOC1S4Q9NUP1 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.63□□□□□ -1.99
BLOC1S4Q9NUP1 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
BLOC1S4Q9NUP1 MTCO3P38-201ENST00000468910 766 ntBASIC2.63□□□□□ -1.99
BLOC1S4Q9NUP1 AC022447.4-201ENST00000504053 364 ntBASIC2.63□□□□□ -1.99
BLOC1S4Q9NUP1 AK3P2-201ENST00000507976 429 ntBASIC2.63□□□□□ -1.99
BLOC1S4Q9NUP1 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC2.63□□□□□ -1.99
BLOC1S4Q9NUP1 SNORA14.1-201ENST00000516113 141 ntBASIC2.63□□□□□ -1.99
BLOC1S4Q9NUP1 CENPUP1-201ENST00000526649 1202 ntBASIC2.63□□□□□ -1.99
BLOC1S4Q9NUP1 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.63□□□□□ -1.99
BLOC1S4Q9NUP1 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC2.63□□□□□ -1.99
BLOC1S4Q9NUP1 RNU6-85P-201ENST00000605989 107 ntBASIC2.63□□□□□ -1.99
BLOC1S4Q9NUP1 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC2.63□□□□□ -1.99
BLOC1S4Q9NUP1 AL137847.3-201ENST00000611521 109 ntBASIC2.63□□□□□ -1.99
BLOC1S4Q9NUP1 AC097372.5-201ENST00000623665 376 ntBASIC2.63□□□□□ -1.99
BLOC1S4Q9NUP1 AP000560.1-201ENST00000624150 1937 ntBASIC2.63□□□□□ -1.99
BLOC1S4Q9NUP1 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.63□□□□□ -1.99
BLOC1S4Q9NUP1 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.62□□□□□ -1.99
BLOC1S4Q9NUP1 RNU6-1141P-201ENST00000364520 107 ntBASIC2.62□□□□□ -1.99
BLOC1S4Q9NUP1 Y_RNA.381-201ENST00000365666 102 ntBASIC2.62□□□□□ -1.99
BLOC1S4Q9NUP1 Y_RNA.436-201ENST00000384097 102 ntBASIC2.62□□□□□ -1.99
BLOC1S4Q9NUP1 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.62□□□□□ -1.99
BLOC1S4Q9NUP1 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.62□□□□□ -1.99
BLOC1S4Q9NUP1 AC243964.1-201ENST00000441814 261 ntBASIC2.62□□□□□ -1.99
BLOC1S4Q9NUP1 AL513328.1-201ENST00000446460 224 ntBASIC2.62□□□□□ -1.99
BLOC1S4Q9NUP1 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC2.62□□□□□ -1.99
BLOC1S4Q9NUP1 TPTE2P5-203ENST00000458118 728 ntBASIC2.62□□□□□ -1.99
BLOC1S4Q9NUP1 AC021269.2-201ENST00000532318 330 ntBASIC2.62□□□□□ -1.99
BLOC1S4Q9NUP1 AC078814.3-201ENST00000553036 491 ntBASIC2.62□□□□□ -1.99
BLOC1S4Q9NUP1 AL512360.1-201ENST00000555346 234 ntBASIC2.62□□□□□ -1.99
BLOC1S4Q9NUP1 AC245505.1-201ENST00000556398 224 ntBASIC2.62□□□□□ -1.99
BLOC1S4Q9NUP1 AC026271.5-201ENST00000577873 130 ntBASIC2.62□□□□□ -1.99
BLOC1S4Q9NUP1 AC103987.3-201ENST00000582071 292 ntBASIC2.62□□□□□ -1.99
BLOC1S4Q9NUP1 AC078899.2-201ENST00000595282 212 ntBASIC2.62□□□□□ -1.99
BLOC1S4Q9NUP1 VN1R80P-201ENST00000597126 338 ntBASIC2.62□□□□□ -1.99
BLOC1S4Q9NUP1 AC087241.4-201ENST00000612441 480 ntBASIC2.62□□□□□ -1.99
BLOC1S4Q9NUP1 AC015540.1-201ENST00000615828 501 ntBASIC2.62□□□□□ -1.99
BLOC1S4Q9NUP1 AC068792.1-201ENST00000621354 417 ntBASIC2.62□□□□□ -1.99
BLOC1S4Q9NUP1 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
BLOC1S4Q9NUP1 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.61□□□□□ -1.99
BLOC1S4Q9NUP1 RNU4-66P-201ENST00000365199 138 ntBASIC2.61□□□□□ -1.99
BLOC1S4Q9NUP1 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC2.61□□□□□ -1.99
BLOC1S4Q9NUP1 RNU6-1032P-201ENST00000384100 107 ntBASIC2.61□□□□□ -1.99
BLOC1S4Q9NUP1 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
BLOC1S4Q9NUP1 POLHP1-201ENST00000411806 470 ntBASIC2.61□□□□□ -1.99
BLOC1S4Q9NUP1 AF274854.1-201ENST00000413236 615 ntBASIC2.61□□□□□ -1.99
BLOC1S4Q9NUP1 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC2.61□□□□□ -1.99
BLOC1S4Q9NUP1 RPS15AP10-201ENST00000432472 382 ntBASIC2.61□□□□□ -1.99
BLOC1S4Q9NUP1 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2.61□□□□□ -1.99
BLOC1S4Q9NUP1 SEPT14P3-201ENST00000439401 183 ntBASIC2.61□□□□□ -1.99
BLOC1S4Q9NUP1 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC2.61□□□□□ -1.99
BLOC1S4Q9NUP1 RPL32P28-201ENST00000443577 397 ntBASIC2.61□□□□□ -1.99
BLOC1S4Q9NUP1 AL732372.2-207ENST00000445840 183 ntBASIC2.61□□□□□ -1.99
BLOC1S4Q9NUP1 IFNA11P-201ENST00000446352 526 ntBASIC2.61□□□□□ -1.99
BLOC1S4Q9NUP1 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.61□□□□□ -1.99
BLOC1S4Q9NUP1 SEPT14P2-201ENST00000453405 183 ntBASIC2.61□□□□□ -1.99
BLOC1S4Q9NUP1 RN7SL636P-201ENST00000497504 294 ntBASIC2.61□□□□□ -1.99
BLOC1S4Q9NUP1 CCDC34P1-201ENST00000507441 517 ntBASIC2.61□□□□□ -1.99
BLOC1S4Q9NUP1 AC009646.1-201ENST00000510455 318 ntBASIC2.61□□□□□ -1.99
BLOC1S4Q9NUP1 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC2.61□□□□□ -1.99
BLOC1S4Q9NUP1 SEPT14P4-201ENST00000513445 186 ntBASIC2.61□□□□□ -1.99
BLOC1S4Q9NUP1 RNA5SP137-201ENST00000516833 135 ntBASIC2.61□□□□□ -1.99
BLOC1S4Q9NUP1 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.61□□□□□ -1.99
BLOC1S4Q9NUP1 AC034114.1-201ENST00000520293 285 ntBASIC2.61□□□□□ -1.99
BLOC1S4Q9NUP1 FO082796.1-201ENST00000523795 183 ntBASIC2.61□□□□□ -1.99
BLOC1S4Q9NUP1 AC027807.1-201ENST00000559921 996 ntBASIC2.61□□□□□ -1.99
BLOC1S4Q9NUP1 MIR3136-201ENST00000583498 78 ntBASIC2.61□□□□□ -1.99
BLOC1S4Q9NUP1 AC107304.1-201ENST00000604229 296 ntBASIC2.61□□□□□ -1.99
BLOC1S4Q9NUP1 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
BLOC1S4Q9NUP1 AC103705.1-201ENST00000619013 241 ntBASIC2.61□□□□□ -1.99
BLOC1S4Q9NUP1 AL160394.1-201ENST00000624765 724 ntBASIC2.61□□□□□ -1.99
BLOC1S4Q9NUP1 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.6□□□□□ -1.99
BLOC1S4Q9NUP1 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.6□□□□□ -1.99
BLOC1S4Q9NUP1 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.6□□□□□ -1.99
BLOC1S4Q9NUP1 RNU6-428P-201ENST00000362942 107 ntBASIC2.6□□□□□ -1.99
BLOC1S4Q9NUP1 SNORA3A-201ENST00000364113 130 ntBASIC2.6□□□□□ -1.99
BLOC1S4Q9NUP1 RNU4-56P-201ENST00000364700 142 ntBASIC2.6□□□□□ -1.99
BLOC1S4Q9NUP1 RNU6-827P-201ENST00000365553 106 ntBASIC2.6□□□□□ -1.99
BLOC1S4Q9NUP1 RNU6-546P-201ENST00000383991 107 ntBASIC2.6□□□□□ -1.99
BLOC1S4Q9NUP1 Y_RNA.517-201ENST00000384551 106 ntBASIC2.6□□□□□ -1.99
BLOC1S4Q9NUP1 MIR23A-201ENST00000385245 73 ntBASIC2.6□□□□□ -1.99
BLOC1S4Q9NUP1 SNORA40.19-201ENST00000390846 128 ntBASIC2.6□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 140.6 ms