Protein–RNA interactions for Protein: Q9NUD5

ZCCHC3, Zinc finger CCHC domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZCCHC3Q9NUD5 Y_RNA.255-201ENST00000364581 97 ntBASIC2.09□□□□□ -2.07
ZCCHC3Q9NUD5 SNORA16B-201ENST00000364674 135 ntBASIC2.09□□□□□ -2.07
ZCCHC3Q9NUD5 RNU6-336P-201ENST00000364891 107 ntBASIC2.09□□□□□ -2.07
ZCCHC3Q9NUD5 MIR29B2-201ENST00000385055 81 ntBASIC2.09□□□□□ -2.07
ZCCHC3Q9NUD5 RNU4-55P-201ENST00000410731 137 ntBASIC2.09□□□□□ -2.07
ZCCHC3Q9NUD5 RNU6-1245P-201ENST00000411130 106 ntBASIC2.09□□□□□ -2.07
ZCCHC3Q9NUD5 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC2.09□□□□□ -2.07
ZCCHC3Q9NUD5 AL117339.3-201ENST00000418733 162 ntBASIC2.09□□□□□ -2.07
ZCCHC3Q9NUD5 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC2.09□□□□□ -2.07
ZCCHC3Q9NUD5 Z83846.1-201ENST00000446798 265 ntBASIC2.09□□□□□ -2.07
ZCCHC3Q9NUD5 MTND1P29-201ENST00000448112 647 ntBASIC2.09□□□□□ -2.07
ZCCHC3Q9NUD5 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC2.09□□□□□ -2.07
ZCCHC3Q9NUD5 AL122001.1-201ENST00000457027 370 ntBASIC2.09□□□□□ -2.07
ZCCHC3Q9NUD5 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC2.09□□□□□ -2.07
ZCCHC3Q9NUD5 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC2.09□□□□□ -2.07
ZCCHC3Q9NUD5 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC2.09□□□□□ -2.07
ZCCHC3Q9NUD5 RNU6-405P-201ENST00000516637 110 ntBASIC2.09□□□□□ -2.07
ZCCHC3Q9NUD5 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.09□□□□□ -2.07
ZCCHC3Q9NUD5 AC107953.1-201ENST00000522216 297 ntBASIC2.09□□□□□ -2.07
ZCCHC3Q9NUD5 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.09□□□□□ -2.07
ZCCHC3Q9NUD5 AP003392.2-201ENST00000527269 208 ntBASIC2.09□□□□□ -2.07
ZCCHC3Q9NUD5 AP003034.1-201ENST00000534621 422 ntBASIC2.09□□□□□ -2.07
ZCCHC3Q9NUD5 AP000763.2-201ENST00000540641 163 ntBASIC2.09□□□□□ -2.07
ZCCHC3Q9NUD5 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC2.09□□□□□ -2.07
ZCCHC3Q9NUD5 PRELID2P1-201ENST00000552837 301 ntBASIC2.09□□□□□ -2.07
ZCCHC3Q9NUD5 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC2.09□□□□□ -2.07
ZCCHC3Q9NUD5 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC2.09□□□□□ -2.07
ZCCHC3Q9NUD5 NBR2-204ENST00000587322 63 ntBASIC2.09□□□□□ -2.07
ZCCHC3Q9NUD5 BNIP3P16-201ENST00000589779 534 ntBASIC2.09□□□□□ -2.07
ZCCHC3Q9NUD5 AC012507.3-201ENST00000603556 477 ntBASIC2.09□□□□□ -2.07
ZCCHC3Q9NUD5 Z82243.1-201ENST00000609432 473 ntBASIC2.09□□□□□ -2.07
ZCCHC3Q9NUD5 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.09□□□□□ -2.08
ZCCHC3Q9NUD5 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.08□□□□□ -2.08
ZCCHC3Q9NUD5 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
ZCCHC3Q9NUD5 RNA5SP289-201ENST00000362332 137 ntBASIC2.08□□□□□ -2.08
ZCCHC3Q9NUD5 snoU2_19.1-201ENST00000362361 80 ntBASIC2.08□□□□□ -2.08
ZCCHC3Q9NUD5 RNU6-428P-201ENST00000362942 107 ntBASIC2.08□□□□□ -2.08
ZCCHC3Q9NUD5 RNU6-1285P-201ENST00000363480 105 ntBASIC2.08□□□□□ -2.08
ZCCHC3Q9NUD5 RNU6-944P-201ENST00000364023 107 ntBASIC2.08□□□□□ -2.08
ZCCHC3Q9NUD5 Y_RNA.381-201ENST00000365666 102 ntBASIC2.08□□□□□ -2.08
ZCCHC3Q9NUD5 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC2.08□□□□□ -2.08
ZCCHC3Q9NUD5 SNORA67.4-201ENST00000384688 142 ntBASIC2.08□□□□□ -2.08
ZCCHC3Q9NUD5 MIR221-201ENST00000385135 110 ntBASIC2.08□□□□□ -2.08
ZCCHC3Q9NUD5 RPS29P13-201ENST00000402041 169 ntBASIC2.08□□□□□ -2.08
ZCCHC3Q9NUD5 RNU2-32P-201ENST00000411193 191 ntBASIC2.08□□□□□ -2.08
ZCCHC3Q9NUD5 RNU6-293P-201ENST00000411259 106 ntBASIC2.08□□□□□ -2.08
ZCCHC3Q9NUD5 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.08□□□□□ -2.08
ZCCHC3Q9NUD5 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC2.08□□□□□ -2.08
ZCCHC3Q9NUD5 AL606489.2-201ENST00000433886 234 ntBASIC2.08□□□□□ -2.08
ZCCHC3Q9NUD5 MTCO2P18-201ENST00000457151 658 ntBASIC2.08□□□□□ -2.08
ZCCHC3Q9NUD5 AC055731.1-201ENST00000474387 401 ntBASIC2.08□□□□□ -2.08
ZCCHC3Q9NUD5 RPS27P21-201ENST00000486977 252 ntBASIC2.08□□□□□ -2.08
ZCCHC3Q9NUD5 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC2.08□□□□□ -2.08
ZCCHC3Q9NUD5 MTND2P33-201ENST00000506452 1031 ntBASIC2.08□□□□□ -2.08
ZCCHC3Q9NUD5 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC2.08□□□□□ -2.08
ZCCHC3Q9NUD5 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC2.08□□□□□ -2.08
ZCCHC3Q9NUD5 SNORA40.12-201ENST00000516329 111 ntBASIC2.08□□□□□ -2.08
ZCCHC3Q9NUD5 RNU6-667P-201ENST00000517186 102 ntBASIC2.08□□□□□ -2.08
ZCCHC3Q9NUD5 AC069113.1-201ENST00000517763 267 ntBASIC2.08□□□□□ -2.08
ZCCHC3Q9NUD5 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC2.08□□□□□ -2.08
ZCCHC3Q9NUD5 AC018630.3-201ENST00000542637 96 ntBASIC2.08□□□□□ -2.08
ZCCHC3Q9NUD5 AC009063.1-201ENST00000563342 702 ntBASIC2.08□□□□□ -2.08
ZCCHC3Q9NUD5 MTND1P15-201ENST00000579262 949 ntBASIC2.08□□□□□ -2.08
ZCCHC3Q9NUD5 SNORD53-201ENST00000579969 78 ntBASIC2.08□□□□□ -2.08
ZCCHC3Q9NUD5 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.08□□□□□ -2.08
ZCCHC3Q9NUD5 MIR4424-201ENST00000585257 86 ntBASIC2.08□□□□□ -2.08
ZCCHC3Q9NUD5 AC087683.1-201ENST00000591187 441 ntBASIC2.08□□□□□ -2.08
ZCCHC3Q9NUD5 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC2.08□□□□□ -2.08
ZCCHC3Q9NUD5 AL031274.2-201ENST00000599419 203 ntBASIC2.08□□□□□ -2.08
ZCCHC3Q9NUD5 VN1R107P-201ENST00000601784 209 ntBASIC2.08□□□□□ -2.08
ZCCHC3Q9NUD5 U2.17-201ENST00000611454 95 ntBASIC2.08□□□□□ -2.08
ZCCHC3Q9NUD5 AC009831.4-201ENST00000620744 325 ntBASIC2.08□□□□□ -2.08
ZCCHC3Q9NUD5 AC007336.1-201ENST00000576365 3828 ntBASIC2.08□□□□□ -2.08
ZCCHC3Q9NUD5 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.08□□□□□ -2.08
ZCCHC3Q9NUD5 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.07□□□□□ -2.08
ZCCHC3Q9NUD5 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.07□□□□□ -2.08
ZCCHC3Q9NUD5 ZNF720P1-201ENST00000562403 1939 ntBASIC2.07□□□□□ -2.08
ZCCHC3Q9NUD5 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.07□□□□□ -2.08
ZCCHC3Q9NUD5 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
ZCCHC3Q9NUD5 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.07□□□□□ -2.08
ZCCHC3Q9NUD5 U3.13-201ENST00000364804 214 ntBASIC2.07□□□□□ -2.08
ZCCHC3Q9NUD5 RNU6-546P-201ENST00000383991 107 ntBASIC2.07□□□□□ -2.08
ZCCHC3Q9NUD5 RNU6-1042P-201ENST00000384204 107 ntBASIC2.07□□□□□ -2.08
ZCCHC3Q9NUD5 HMGN2P39-201ENST00000398005 273 ntBASIC2.07□□□□□ -2.08
ZCCHC3Q9NUD5 U3.40-201ENST00000408706 208 ntBASIC2.07□□□□□ -2.08
ZCCHC3Q9NUD5 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.07□□□□□ -2.08
ZCCHC3Q9NUD5 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC2.07□□□□□ -2.08
ZCCHC3Q9NUD5 CCDC34P1-201ENST00000507441 517 ntBASIC2.07□□□□□ -2.08
ZCCHC3Q9NUD5 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC2.07□□□□□ -2.08
ZCCHC3Q9NUD5 RNU5F-2P-201ENST00000516066 82 ntBASIC2.07□□□□□ -2.08
ZCCHC3Q9NUD5 RNU2-19P-201ENST00000517288 84 ntBASIC2.07□□□□□ -2.08
ZCCHC3Q9NUD5 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC2.07□□□□□ -2.08
ZCCHC3Q9NUD5 MTND4P7-201ENST00000523876 130 ntBASIC2.07□□□□□ -2.08
ZCCHC3Q9NUD5 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC2.07□□□□□ -2.08
ZCCHC3Q9NUD5 AC115990.1-201ENST00000526957 301 ntBASIC2.07□□□□□ -2.08
ZCCHC3Q9NUD5 MDM2-233ENST00000545204 398 ntTSL 5 BASIC2.07□□□□□ -2.08
ZCCHC3Q9NUD5 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC2.07□□□□□ -2.08
ZCCHC3Q9NUD5 SNRPGP17-201ENST00000603780 214 ntBASIC2.07□□□□□ -2.08
ZCCHC3Q9NUD5 AP001330.5-201ENST00000607176 411 ntBASIC2.07□□□□□ -2.08
ZCCHC3Q9NUD5 AL132822.1-201ENST00000617063 513 ntBASIC2.07□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms