Protein–RNA interactions for Protein: Q9BYR3

KRTAP4-4, Keratin-associated protein 4-4, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-4Q9BYR3 CDH12-202ENST00000504376 4160 ntAPPRIS P1 TSL 5 BASIC1.29□□□□□ -2.2
KRTAP4-4Q9BYR3 VEPH1-201ENST00000362010 4202 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
KRTAP4-4Q9BYR3 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
KRTAP4-4Q9BYR3 OGT-202ENST00000373719 5461 ntAPPRIS P3 TSL 1 (best) BASIC1.29□□□□□ -2.2
KRTAP4-4Q9BYR3 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC1.29□□□□□ -2.2
KRTAP4-4Q9BYR3 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC1.29□□□□□ -2.2
KRTAP4-4Q9BYR3 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC1.28□□□□□ -2.2
KRTAP4-4Q9BYR3 KCNA2-208ENST00000638616 3279 ntAPPRIS P1 TSL 5 BASIC1.28□□□□□ -2.2
KRTAP4-4Q9BYR3 TRIM6-TRIM34-201ENST00000354852 3391 ntAPPRIS P1 TSL 2 BASIC1.28□□□□□ -2.2
KRTAP4-4Q9BYR3 COL21A1-212ENST00000535941 3369 ntAPPRIS ALT1 TSL 5 BASIC1.28□□□□□ -2.2
KRTAP4-4Q9BYR3 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC1.28□□□□□ -2.2
KRTAP4-4Q9BYR3 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
KRTAP4-4Q9BYR3 NEMP2-202ENST00000409150 6168 ntAPPRIS P1 TSL 2 BASIC1.28□□□□□ -2.2
KRTAP4-4Q9BYR3 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
KRTAP4-4Q9BYR3 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC1.28□□□□□ -2.2
KRTAP4-4Q9BYR3 OR5A2-201ENST00000302040 6318 ntAPPRIS P1 BASIC1.28□□□□□ -2.2
KRTAP4-4Q9BYR3 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC1.28□□□□□ -2.2
KRTAP4-4Q9BYR3 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC1.28□□□□□ -2.2
KRTAP4-4Q9BYR3 AC009962.1-201ENST00000567327 3813 ntBASIC1.28□□□□□ -2.2
KRTAP4-4Q9BYR3 ARHGAP28-201ENST00000262227 5369 ntAPPRIS ALT2 TSL 1 (best) BASIC1.28□□□□□ -2.2
KRTAP4-4Q9BYR3 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC1.28□□□□□ -2.2
KRTAP4-4Q9BYR3 PPFIA2-201ENST00000333447 5517 ntTSL 5 BASIC1.28□□□□□ -2.2
KRTAP4-4Q9BYR3 TLR10-201ENST00000308973 3958 ntAPPRIS P1 TSL 5 BASIC1.28□□□□□ -2.2
KRTAP4-4Q9BYR3 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
KRTAP4-4Q9BYR3 OR11G2-203ENST00000641879 4415 ntAPPRIS P1 BASIC1.28□□□□□ -2.2
KRTAP4-4Q9BYR3 MROH3P-201ENST00000435735 2676 ntBASIC1.28□□□□□ -2.2
KRTAP4-4Q9BYR3 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC1.28□□□□□ -2.2
KRTAP4-4Q9BYR3 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
KRTAP4-4Q9BYR3 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC1.28□□□□□ -2.2
KRTAP4-4Q9BYR3 ANLN-201ENST00000265748 4787 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
KRTAP4-4Q9BYR3 AC010886.1-201ENST00000437380 2869 ntBASIC1.28□□□□□ -2.2
KRTAP4-4Q9BYR3 GRIP1-202ENST00000398016 4888 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
KRTAP4-4Q9BYR3 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
KRTAP4-4Q9BYR3 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
KRTAP4-4Q9BYR3 MAPK10-287ENST00000641217 3037 ntBASIC1.28□□□□□ -2.2
KRTAP4-4Q9BYR3 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
KRTAP4-4Q9BYR3 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
KRTAP4-4Q9BYR3 BRD8-201ENST00000230901 3198 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
KRTAP4-4Q9BYR3 GPBP1-208ENST00000514387 3310 ntAPPRIS ALT2 TSL 1 (best) BASIC1.28□□□□□ -2.2
KRTAP4-4Q9BYR3 EPHA4-203ENST00000409938 3363 ntAPPRIS P1 TSL 2 BASIC1.28□□□□□ -2.2
KRTAP4-4Q9BYR3 NKRF-204ENST00000542113 3351 ntTSL 3 BASIC1.28□□□□□ -2.2
KRTAP4-4Q9BYR3 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
KRTAP4-4Q9BYR3 OPALIN-201ENST00000371172 3557 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
KRTAP4-4Q9BYR3 OPALIN-204ENST00000419479 3581 ntTSL 2 BASIC1.28□□□□□ -2.2
KRTAP4-4Q9BYR3 U3.2-201ENST00000362981 210 ntBASIC1.28□□□□□ -2.2
KRTAP4-4Q9BYR3 SNORA2.1-201ENST00000363089 137 ntBASIC1.28□□□□□ -2.2
KRTAP4-4Q9BYR3 RNA5SP232-201ENST00000364144 119 ntBASIC1.28□□□□□ -2.2
KRTAP4-4Q9BYR3 Y_RNA.246-201ENST00000364495 108 ntBASIC1.28□□□□□ -2.2
KRTAP4-4Q9BYR3 RNU1-100P-201ENST00000365255 165 ntBASIC1.28□□□□□ -2.2
KRTAP4-4Q9BYR3 U3.52-201ENST00000384034 216 ntBASIC1.28□□□□□ -2.2
KRTAP4-4Q9BYR3 RNU6-974P-201ENST00000384099 108 ntBASIC1.28□□□□□ -2.2
KRTAP4-4Q9BYR3 RNU6-163P-201ENST00000384396 106 ntBASIC1.28□□□□□ -2.2
KRTAP4-4Q9BYR3 RNU6-1235P-201ENST00000384559 107 ntBASIC1.28□□□□□ -2.2
KRTAP4-4Q9BYR3 SNORA67.4-201ENST00000384688 142 ntBASIC1.28□□□□□ -2.2
KRTAP4-4Q9BYR3 MIR203A-201ENST00000384836 110 ntBASIC1.28□□□□□ -2.2
KRTAP4-4Q9BYR3 MIR575-201ENST00000385013 94 ntBASIC1.28□□□□□ -2.2
KRTAP4-4Q9BYR3 MIR3065-201ENST00000390137 79 ntBASIC1.28□□□□□ -2.2
KRTAP4-4Q9BYR3 ARSFP1-201ENST00000398758 477 ntBASIC1.28□□□□□ -2.2
KRTAP4-4Q9BYR3 AL353133.1-201ENST00000407695 401 ntBASIC1.28□□□□□ -2.2
KRTAP4-4Q9BYR3 RNA5SP280-201ENST00000411230 115 ntBASIC1.28□□□□□ -2.2
KRTAP4-4Q9BYR3 FAM183DP-201ENST00000421987 399 ntBASIC1.28□□□□□ -2.2
KRTAP4-4Q9BYR3 AC114752.1-201ENST00000448204 289 ntTSL 3 BASIC1.28□□□□□ -2.2
KRTAP4-4Q9BYR3 BX276092.4-201ENST00000452056 248 ntBASIC1.28□□□□□ -2.2
KRTAP4-4Q9BYR3 RNU6-498P-201ENST00000459468 107 ntBASIC1.28□□□□□ -2.2
KRTAP4-4Q9BYR3 AL122020.1-201ENST00000472287 459 ntBASIC1.28□□□□□ -2.2
KRTAP4-4Q9BYR3 RPS20P22-201ENST00000473700 357 ntBASIC1.28□□□□□ -2.2
KRTAP4-4Q9BYR3 AC015524.1-201ENST00000491585 472 ntBASIC1.28□□□□□ -2.2
KRTAP4-4Q9BYR3 RN7SL504P-201ENST00000494496 287 ntBASIC1.28□□□□□ -2.2
KRTAP4-4Q9BYR3 AC025445.1-201ENST00000502728 300 ntBASIC1.28□□□□□ -2.2
KRTAP4-4Q9BYR3 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
KRTAP4-4Q9BYR3 TOMM22P4-201ENST00000511318 336 ntBASIC1.28□□□□□ -2.2
KRTAP4-4Q9BYR3 SCARNA5-201ENST00000516201 276 ntBASIC1.28□□□□□ -2.2
KRTAP4-4Q9BYR3 SCARNA18.2-201ENST00000516882 84 ntBASIC1.28□□□□□ -2.2
KRTAP4-4Q9BYR3 RNU11-2P-201ENST00000516898 142 ntBASIC1.28□□□□□ -2.2
KRTAP4-4Q9BYR3 RN7SKP233-201ENST00000517005 110 ntBASIC1.28□□□□□ -2.2
KRTAP4-4Q9BYR3 RNA5SP290-201ENST00000517133 127 ntBASIC1.28□□□□□ -2.2
KRTAP4-4Q9BYR3 LINC01484-201ENST00000517733 555 ntTSL 4 BASIC1.28□□□□□ -2.2
KRTAP4-4Q9BYR3 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC1.28□□□□□ -2.2
KRTAP4-4Q9BYR3 AC121758.2-201ENST00000553271 193 ntBASIC1.28□□□□□ -2.2
KRTAP4-4Q9BYR3 AC023813.1-201ENST00000565055 306 ntTSL 5 BASIC1.28□□□□□ -2.2
KRTAP4-4Q9BYR3 AC040162.2-201ENST00000573092 157 ntBASIC1.28□□□□□ -2.2
KRTAP4-4Q9BYR3 AC104581.3-201ENST00000573621 348 ntAPPRIS P1 TSL 5 BASIC1.28□□□□□ -2.2
KRTAP4-4Q9BYR3 LINC01974-201ENST00000575126 494 ntTSL 3 BASIC1.28□□□□□ -2.2
KRTAP4-4Q9BYR3 AC015818.3-202ENST00000579603 283 ntTSL 5 BASIC1.28□□□□□ -2.2
KRTAP4-4Q9BYR3 MIR4437-201ENST00000581331 60 ntBASIC1.28□□□□□ -2.2
KRTAP4-4Q9BYR3 MIR4732-201ENST00000581873 76 ntBASIC1.28□□□□□ -2.2
KRTAP4-4Q9BYR3 UBL5P2-201ENST00000583788 219 ntBASIC1.28□□□□□ -2.2
KRTAP4-4Q9BYR3 PPIAL4C-201ENST00000585245 600 ntAPPRIS P1 BASIC1.28□□□□□ -2.2
KRTAP4-4Q9BYR3 MIR4762-201ENST00000585261 75 ntBASIC1.28□□□□□ -2.2
KRTAP4-4Q9BYR3 AC015801.1-201ENST00000585651 153 ntBASIC1.28□□□□□ -2.2
KRTAP4-4Q9BYR3 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC1.28□□□□□ -2.2
KRTAP4-4Q9BYR3 MTRNR2L2-201ENST00000604882 87 ntBASIC1.28□□□□□ -2.2
KRTAP4-4Q9BYR3 SNORD14A-201ENST00000606526 91 ntBASIC1.28□□□□□ -2.2
KRTAP4-4Q9BYR3 AL020996.3-201ENST00000606617 222 ntBASIC1.28□□□□□ -2.2
KRTAP4-4Q9BYR3 AC096577.2-201ENST00000611455 153 ntBASIC1.28□□□□□ -2.2
KRTAP4-4Q9BYR3 5S_rRNA.23-201ENST00000612086 102 ntBASIC1.28□□□□□ -2.2
KRTAP4-4Q9BYR3 Metazoa_SRP.195-201ENST00000612667 287 ntBASIC1.28□□□□□ -2.2
KRTAP4-4Q9BYR3 MIAT_exon5_1.1-201ENST00000618919 149 ntBASIC1.28□□□□□ -2.2
KRTAP4-4Q9BYR3 CR392039.5-201ENST00000623201 510 ntBASIC1.28□□□□□ -2.2
KRTAP4-4Q9BYR3 AC005514.1-201ENST00000623521 208 ntBASIC1.28□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 125.6 ms