Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 RN7SKP125-201ENST00000410481 302 ntBASIC4.56□□□□□ -1.68
USB1Q9BQ65 AL445584.1-201ENST00000431451 330 ntBASIC4.56□□□□□ -1.68
USB1Q9BQ65 RPS3P1-201ENST00000456781 192 ntBASIC4.56□□□□□ -1.68
USB1Q9BQ65 Y_RNA.649-201ENST00000459077 103 ntBASIC4.56□□□□□ -1.68
USB1Q9BQ65 RNU6-437P-201ENST00000459408 95 ntBASIC4.56□□□□□ -1.68
USB1Q9BQ65 RPS23P1-201ENST00000491662 432 ntBASIC4.56□□□□□ -1.68
USB1Q9BQ65 RPL23AP54-201ENST00000495129 419 ntBASIC4.56□□□□□ -1.68
USB1Q9BQ65 Y_RNA.690-201ENST00000516603 95 ntBASIC4.56□□□□□ -1.68
USB1Q9BQ65 HSPE1P18-201ENST00000517602 280 ntBASIC4.56□□□□□ -1.68
USB1Q9BQ65 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC4.56□□□□□ -1.68
USB1Q9BQ65 AC091152.3-201ENST00000604227 325 ntBASIC4.56□□□□□ -1.68
USB1Q9BQ65 AC069200.1-201ENST00000609511 323 ntBASIC4.56□□□□□ -1.68
USB1Q9BQ65 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC4.56□□□□□ -1.68
USB1Q9BQ65 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
USB1Q9BQ65 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
USB1Q9BQ65 AC018555.1-201ENST00000567548 1980 ntBASIC4.56□□□□□ -1.68
USB1Q9BQ65 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
USB1Q9BQ65 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
USB1Q9BQ65 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC4.56□□□□□ -1.68
USB1Q9BQ65 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
USB1Q9BQ65 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
USB1Q9BQ65 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC4.55□□□□□ -1.68
USB1Q9BQ65 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
USB1Q9BQ65 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
USB1Q9BQ65 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
USB1Q9BQ65 RNU4-41P-201ENST00000364426 143 ntBASIC4.55□□□□□ -1.68
USB1Q9BQ65 Y_RNA.346-201ENST00000365385 112 ntBASIC4.55□□□□□ -1.68
USB1Q9BQ65 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC4.55□□□□□ -1.68
USB1Q9BQ65 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.55□□□□□ -1.68
USB1Q9BQ65 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC4.55□□□□□ -1.68
USB1Q9BQ65 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC4.55□□□□□ -1.68
USB1Q9BQ65 RPL23AP62-201ENST00000463396 453 ntBASIC4.55□□□□□ -1.68
USB1Q9BQ65 AC090515.1-201ENST00000465295 476 ntBASIC4.55□□□□□ -1.68
USB1Q9BQ65 RNU6-781P-201ENST00000516377 101 ntBASIC4.55□□□□□ -1.68
USB1Q9BQ65 RNU7-116P-201ENST00000516940 62 ntBASIC4.55□□□□□ -1.68
USB1Q9BQ65 AC091178.2-201ENST00000584401 117 ntBASIC4.55□□□□□ -1.68
USB1Q9BQ65 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC4.55□□□□□ -1.68
USB1Q9BQ65 uc_338.28-201ENST00000612082 187 ntBASIC4.55□□□□□ -1.68
USB1Q9BQ65 AC118658.2-201ENST00000618697 459 ntBASIC4.55□□□□□ -1.68
USB1Q9BQ65 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC4.55□□□□□ -1.68
USB1Q9BQ65 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
USB1Q9BQ65 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
USB1Q9BQ65 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
USB1Q9BQ65 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
USB1Q9BQ65 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
USB1Q9BQ65 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.55□□□□□ -1.68
USB1Q9BQ65 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
USB1Q9BQ65 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
USB1Q9BQ65 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC4.54□□□□□ -1.68
USB1Q9BQ65 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
USB1Q9BQ65 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.54□□□□□ -1.68
USB1Q9BQ65 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
USB1Q9BQ65 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
USB1Q9BQ65 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.54□□□□□ -1.68
USB1Q9BQ65 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
USB1Q9BQ65 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC4.54□□□□□ -1.68
USB1Q9BQ65 AL159152.1-201ENST00000635019 2587 ntBASIC4.54□□□□□ -1.68
USB1Q9BQ65 SNORA58B-201ENST00000364259 136 ntBASIC4.54□□□□□ -1.68
USB1Q9BQ65 RNU6-484P-201ENST00000384016 107 ntBASIC4.54□□□□□ -1.68
USB1Q9BQ65 RNU6ATAC7P-201ENST00000408111 127 ntBASIC4.54□□□□□ -1.68
USB1Q9BQ65 MIR1185-2-201ENST00000408687 86 ntBASIC4.54□□□□□ -1.68
USB1Q9BQ65 AC009238.2-201ENST00000431026 355 ntBASIC4.54□□□□□ -1.68
USB1Q9BQ65 AL772161.1-201ENST00000439130 476 ntBASIC4.54□□□□□ -1.68
USB1Q9BQ65 RPL39P40-201ENST00000445481 146 ntBASIC4.54□□□□□ -1.68
USB1Q9BQ65 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC4.54□□□□□ -1.68
USB1Q9BQ65 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC4.54□□□□□ -1.68
USB1Q9BQ65 AL441985.1-201ENST00000457727 251 ntBASIC4.54□□□□□ -1.68
USB1Q9BQ65 AC098976.1-201ENST00000513014 541 ntBASIC4.54□□□□□ -1.68
USB1Q9BQ65 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC4.54□□□□□ -1.68
USB1Q9BQ65 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC4.54□□□□□ -1.68
USB1Q9BQ65 RN7SKP19-201ENST00000516016 252 ntBASIC4.54□□□□□ -1.68
USB1Q9BQ65 RNU6-1299P-201ENST00000516316 100 ntBASIC4.54□□□□□ -1.68
USB1Q9BQ65 HIGD1AP1-201ENST00000550979 275 ntBASIC4.54□□□□□ -1.68
USB1Q9BQ65 AL160236.1-201ENST00000556317 195 ntBASIC4.54□□□□□ -1.68
USB1Q9BQ65 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
USB1Q9BQ65 RPL23AP97-201ENST00000568955 471 ntBASIC4.54□□□□□ -1.68
USB1Q9BQ65 MIR3691-201ENST00000578066 90 ntBASIC4.54□□□□□ -1.68
USB1Q9BQ65 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC4.54□□□□□ -1.68
USB1Q9BQ65 AL137843.1-201ENST00000605078 385 ntBASIC4.54□□□□□ -1.68
USB1Q9BQ65 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC4.54□□□□□ -1.68
USB1Q9BQ65 AC112484.5-201ENST00000624189 228 ntBASIC4.54□□□□□ -1.68
USB1Q9BQ65 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
USB1Q9BQ65 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.54□□□□□ -1.68
USB1Q9BQ65 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC4.54□□□□□ -1.68
USB1Q9BQ65 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.54□□□□□ -1.68
USB1Q9BQ65 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
USB1Q9BQ65 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
USB1Q9BQ65 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
USB1Q9BQ65 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.54□□□□□ -1.68
USB1Q9BQ65 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
USB1Q9BQ65 AC007496.3-201ENST00000624987 3443 ntBASIC4.53□□□□□ -1.68
USB1Q9BQ65 SALL4P2-201ENST00000423288 2910 ntBASIC4.53□□□□□ -1.68
USB1Q9BQ65 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.53□□□□□ -1.68
USB1Q9BQ65 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
USB1Q9BQ65 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
USB1Q9BQ65 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
USB1Q9BQ65 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC4.53□□□□□ -1.68
USB1Q9BQ65 SNURFL-201ENST00000309296 343 ntBASIC4.53□□□□□ -1.68
USB1Q9BQ65 AC079741.1-201ENST00000321498 212 ntBASIC4.53□□□□□ -1.68
USB1Q9BQ65 RNU6-674P-201ENST00000363831 107 ntBASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms