Protein–RNA interactions for Protein: Q96JN2

CCDC136, Coiled-coil domain-containing protein 136, humanhuman

Predictions only

Length 1,154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC136Q96JN2 PRELID2P1-201ENST00000552837 301 ntBASIC3.35□□□□□ -1.87
CCDC136Q96JN2 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3.35□□□□□ -1.87
CCDC136Q96JN2 AC105137.2-201ENST00000569073 466 ntBASIC3.35□□□□□ -1.87
CCDC136Q96JN2 AC007014.2-201ENST00000615581 479 ntBASIC3.35□□□□□ -1.87
CCDC136Q96JN2 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
CCDC136Q96JN2 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC3.34□□□□□ -1.87
CCDC136Q96JN2 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
CCDC136Q96JN2 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
CCDC136Q96JN2 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC3.34□□□□□ -1.87
CCDC136Q96JN2 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3.34□□□□□ -1.87
CCDC136Q96JN2 Y_RNA.573-201ENST00000384763 105 ntBASIC3.34□□□□□ -1.87
CCDC136Q96JN2 RNU2-23P-201ENST00000410545 195 ntBASIC3.34□□□□□ -1.87
CCDC136Q96JN2 Z92545.1-201ENST00000411782 234 ntBASIC3.34□□□□□ -1.87
CCDC136Q96JN2 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC3.34□□□□□ -1.87
CCDC136Q96JN2 RPS3AP44-201ENST00000425466 790 ntBASIC3.34□□□□□ -1.87
CCDC136Q96JN2 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC3.34□□□□□ -1.87
CCDC136Q96JN2 AC080013.2-201ENST00000460866 323 ntBASIC3.34□□□□□ -1.87
CCDC136Q96JN2 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.34□□□□□ -1.87
CCDC136Q96JN2 CKS1BP7-201ENST00000522230 235 ntBASIC3.34□□□□□ -1.87
CCDC136Q96JN2 COPS8P3-201ENST00000526024 482 ntBASIC3.34□□□□□ -1.87
CCDC136Q96JN2 MIR5571-201ENST00000577998 113 ntBASIC3.34□□□□□ -1.87
CCDC136Q96JN2 MIR4658-201ENST00000584344 65 ntBASIC3.34□□□□□ -1.87
CCDC136Q96JN2 AP000907.4-201ENST00000604143 237 ntBASIC3.34□□□□□ -1.87
CCDC136Q96JN2 FAM157A-202ENST00000615155 405 ntBASIC3.34□□□□□ -1.87
CCDC136Q96JN2 AC245884.12-201ENST00000615364 59 ntBASIC3.34□□□□□ -1.87
CCDC136Q96JN2 HMGB1P24-202ENST00000615653 685 ntBASIC3.34□□□□□ -1.87
CCDC136Q96JN2 AC090617.10-201ENST00000624308 134 ntBASIC3.34□□□□□ -1.87
CCDC136Q96JN2 AC241585.2-209ENST00000638217 143 ntBASIC3.34□□□□□ -1.87
CCDC136Q96JN2 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.34□□□□□ -1.87
CCDC136Q96JN2 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.88
CCDC136Q96JN2 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.88
CCDC136Q96JN2 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC3.33□□□□□ -1.88
CCDC136Q96JN2 RNU1-112P-201ENST00000364401 164 ntBASIC3.33□□□□□ -1.88
CCDC136Q96JN2 U3.13-201ENST00000364804 214 ntBASIC3.33□□□□□ -1.88
CCDC136Q96JN2 RNU6-1032P-201ENST00000384100 107 ntBASIC3.33□□□□□ -1.88
CCDC136Q96JN2 SNORA18.3-201ENST00000384122 132 ntBASIC3.33□□□□□ -1.88
CCDC136Q96JN2 UBA52P6-201ENST00000399822 382 ntBASIC3.33□□□□□ -1.88
CCDC136Q96JN2 AL138827.1-201ENST00000402666 306 ntBASIC3.33□□□□□ -1.88
CCDC136Q96JN2 RNA5SP390-201ENST00000410191 113 ntBASIC3.33□□□□□ -1.88
CCDC136Q96JN2 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC3.33□□□□□ -1.88
CCDC136Q96JN2 EEF1A1P41-201ENST00000414667 207 ntBASIC3.33□□□□□ -1.88
CCDC136Q96JN2 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC3.33□□□□□ -1.88
CCDC136Q96JN2 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.33□□□□□ -1.88
CCDC136Q96JN2 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC3.33□□□□□ -1.88
CCDC136Q96JN2 SNRPGP7-201ENST00000469016 106 ntBASIC3.33□□□□□ -1.88
CCDC136Q96JN2 RPS29P25-201ENST00000481709 171 ntBASIC3.33□□□□□ -1.88
CCDC136Q96JN2 RNU2-53P-201ENST00000516257 147 ntBASIC3.33□□□□□ -1.88
CCDC136Q96JN2 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC3.33□□□□□ -1.88
CCDC136Q96JN2 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC3.33□□□□□ -1.88
CCDC136Q96JN2 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC3.33□□□□□ -1.88
CCDC136Q96JN2 AC009127.3-201ENST00000570531 403 ntBASIC3.33□□□□□ -1.88
CCDC136Q96JN2 AC093732.2-201ENST00000607950 274 ntBASIC3.33□□□□□ -1.88
CCDC136Q96JN2 AC064836.2-201ENST00000609491 462 ntBASIC3.33□□□□□ -1.88
CCDC136Q96JN2 uc_338.15-201ENST00000615470 191 ntBASIC3.33□□□□□ -1.88
CCDC136Q96JN2 AC009233.1-201ENST00000616477 371 ntBASIC3.33□□□□□ -1.88
CCDC136Q96JN2 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CCDC136Q96JN2 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC3.33□□□□□ -1.88
CCDC136Q96JN2 AC121333.1-201ENST00000567488 2709 ntBASIC3.33□□□□□ -1.88
CCDC136Q96JN2 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CCDC136Q96JN2 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC3.32□□□□□ -1.88
CCDC136Q96JN2 U3.12-201ENST00000364498 214 ntBASIC3.32□□□□□ -1.88
CCDC136Q96JN2 MIR1277-201ENST00000408536 78 ntBASIC3.32□□□□□ -1.88
CCDC136Q96JN2 AC096664.2-201ENST00000411843 406 ntBASIC3.32□□□□□ -1.88
CCDC136Q96JN2 USP9YP20-201ENST00000419224 558 ntBASIC3.32□□□□□ -1.88
CCDC136Q96JN2 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC3.32□□□□□ -1.88
CCDC136Q96JN2 RPL39P29-201ENST00000447779 157 ntBASIC3.32□□□□□ -1.88
CCDC136Q96JN2 EEF1B2P7-201ENST00000451177 676 ntBASIC3.32□□□□□ -1.88
CCDC136Q96JN2 AC008628.2-201ENST00000502605 298 ntBASIC3.32□□□□□ -1.88
CCDC136Q96JN2 RNU6-1332P-201ENST00000516666 104 ntBASIC3.32□□□□□ -1.88
CCDC136Q96JN2 MTND4LP26-201ENST00000518144 282 ntBASIC3.32□□□□□ -1.88
CCDC136Q96JN2 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC3.32□□□□□ -1.88
CCDC136Q96JN2 AC087854.1-201ENST00000519706 414 ntBASIC3.32□□□□□ -1.88
CCDC136Q96JN2 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC3.32□□□□□ -1.88
CCDC136Q96JN2 AP003033.1-201ENST00000527244 415 ntBASIC3.32□□□□□ -1.88
CCDC136Q96JN2 CBX3P7-201ENST00000532876 502 ntBASIC3.32□□□□□ -1.88
CCDC136Q96JN2 AC093249.1-201ENST00000567049 203 ntBASIC3.32□□□□□ -1.88
CCDC136Q96JN2 AL713866.2-201ENST00000603579 219 ntBASIC3.32□□□□□ -1.88
CCDC136Q96JN2 ELOCP5-201ENST00000604924 333 ntBASIC3.32□□□□□ -1.88
CCDC136Q96JN2 AC135507.2-201ENST00000612443 309 ntBASIC3.32□□□□□ -1.88
CCDC136Q96JN2 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.32□□□□□ -1.88
CCDC136Q96JN2 AC100810.6-201ENST00000638068 285 ntBASIC3.32□□□□□ -1.88
CCDC136Q96JN2 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CCDC136Q96JN2 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC3.31□□□□□ -1.88
CCDC136Q96JN2 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC3.31□□□□□ -1.88
CCDC136Q96JN2 SNORA38-201ENST00000363946 132 ntBASIC3.31□□□□□ -1.88
CCDC136Q96JN2 SNORA80E-201ENST00000384744 137 ntBASIC3.31□□□□□ -1.88
CCDC136Q96JN2 AL445529.1-201ENST00000398713 389 ntBASIC3.31□□□□□ -1.88
CCDC136Q96JN2 RNU6-1245P-201ENST00000411130 106 ntBASIC3.31□□□□□ -1.88
CCDC136Q96JN2 CYCSP48-201ENST00000417124 323 ntBASIC3.31□□□□□ -1.88
CCDC136Q96JN2 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC3.31□□□□□ -1.88
CCDC136Q96JN2 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CCDC136Q96JN2 AC011816.1-201ENST00000441346 546 ntBASIC3.31□□□□□ -1.88
CCDC136Q96JN2 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC3.31□□□□□ -1.88
CCDC136Q96JN2 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CCDC136Q96JN2 AC097462.2-201ENST00000504623 481 ntBASIC3.31□□□□□ -1.88
CCDC136Q96JN2 AC008526.1-201ENST00000509149 338 ntBASIC3.31□□□□□ -1.88
CCDC136Q96JN2 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC3.31□□□□□ -1.88
CCDC136Q96JN2 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC3.31□□□□□ -1.88
CCDC136Q96JN2 MYL12BP1-201ENST00000569826 507 ntBASIC3.31□□□□□ -1.88
CCDC136Q96JN2 MIR5092-201ENST00000583139 88 ntBASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 147.7 ms