Protein–RNA interactions for Protein: Q96IS3

RAX2, Retina and anterior neural fold homeobox protein 2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAX2Q96IS3 RNU1-30P-201ENST00000606575 163 ntBASIC3.2□□□□□ -1.9
RAX2Q96IS3 AC099778.2-201ENST00000610904 211 ntBASIC3.2□□□□□ -1.9
RAX2Q96IS3 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
RAX2Q96IS3 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
RAX2Q96IS3 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
RAX2Q96IS3 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.19□□□□□ -1.9
RAX2Q96IS3 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
RAX2Q96IS3 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.19□□□□□ -1.9
RAX2Q96IS3 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
RAX2Q96IS3 RNU6-1210P-201ENST00000363775 107 ntBASIC3.19□□□□□ -1.9
RAX2Q96IS3 Y_RNA.512-201ENST00000384518 102 ntBASIC3.19□□□□□ -1.9
RAX2Q96IS3 RNU1-89P-201ENST00000384592 164 ntBASIC3.19□□□□□ -1.9
RAX2Q96IS3 MIR549A-201ENST00000385268 96 ntBASIC3.19□□□□□ -1.9
RAX2Q96IS3 U3.19-201ENST00000390893 196 ntBASIC3.19□□□□□ -1.9
RAX2Q96IS3 RNU6-1109P-201ENST00000391187 107 ntBASIC3.19□□□□□ -1.9
RAX2Q96IS3 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.19□□□□□ -1.9
RAX2Q96IS3 EIF1P2-201ENST00000428233 350 ntBASIC3.19□□□□□ -1.9
RAX2Q96IS3 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC3.19□□□□□ -1.9
RAX2Q96IS3 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.19□□□□□ -1.9
RAX2Q96IS3 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC3.19□□□□□ -1.9
RAX2Q96IS3 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.19□□□□□ -1.9
RAX2Q96IS3 RPS29P12-201ENST00000460178 152 ntBASIC3.19□□□□□ -1.9
RAX2Q96IS3 AL121594.1-201ENST00000475906 575 ntBASIC3.19□□□□□ -1.9
RAX2Q96IS3 AC026726.1-201ENST00000512859 601 ntBASIC3.19□□□□□ -1.9
RAX2Q96IS3 RNU2-53P-201ENST00000516257 147 ntBASIC3.19□□□□□ -1.9
RAX2Q96IS3 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.19□□□□□ -1.9
RAX2Q96IS3 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.19□□□□□ -1.9
RAX2Q96IS3 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC3.19□□□□□ -1.9
RAX2Q96IS3 AL162713.1-201ENST00000604480 262 ntBASIC3.19□□□□□ -1.9
RAX2Q96IS3 AC005296.1-201ENST00000616145 209 ntBASIC3.19□□□□□ -1.9
RAX2Q96IS3 MIR6875-201ENST00000617506 72 ntBASIC3.19□□□□□ -1.9
RAX2Q96IS3 SMCR2_2.1-201ENST00000619783 161 ntBASIC3.19□□□□□ -1.9
RAX2Q96IS3 U6.92-201ENST00000636464 89 ntBASIC3.19□□□□□ -1.9
RAX2Q96IS3 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
RAX2Q96IS3 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC3.19□□□□□ -1.9
RAX2Q96IS3 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC3.19□□□□□ -1.9
RAX2Q96IS3 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
RAX2Q96IS3 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
RAX2Q96IS3 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.18□□□□□ -1.9
RAX2Q96IS3 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.18□□□□□ -1.9
RAX2Q96IS3 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC3.18□□□□□ -1.9
RAX2Q96IS3 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
RAX2Q96IS3 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
RAX2Q96IS3 snoU2_19.1-201ENST00000362361 80 ntBASIC3.18□□□□□ -1.9
RAX2Q96IS3 RNU6-1301P-201ENST00000362724 104 ntBASIC3.18□□□□□ -1.9
RAX2Q96IS3 RNU6-1083P-201ENST00000384022 107 ntBASIC3.18□□□□□ -1.9
RAX2Q96IS3 MIR10B-201ENST00000385011 110 ntBASIC3.18□□□□□ -1.9
RAX2Q96IS3 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
RAX2Q96IS3 RNU1-139P-201ENST00000391307 165 ntBASIC3.18□□□□□ -1.9
RAX2Q96IS3 CBX3P9-201ENST00000402326 552 ntBASIC3.18□□□□□ -1.9
RAX2Q96IS3 MIR1302-3-201ENST00000408128 138 ntBASIC3.18□□□□□ -1.9
RAX2Q96IS3 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC3.18□□□□□ -1.9
RAX2Q96IS3 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC3.18□□□□□ -1.9
RAX2Q96IS3 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC3.18□□□□□ -1.9
RAX2Q96IS3 RPS15AP7-201ENST00000439294 405 ntBASIC3.18□□□□□ -1.9
RAX2Q96IS3 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC3.18□□□□□ -1.9
RAX2Q96IS3 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC3.18□□□□□ -1.9
RAX2Q96IS3 DYNLT3P2-201ENST00000442517 295 ntBASIC3.18□□□□□ -1.9
RAX2Q96IS3 AC006011.1-201ENST00000442758 349 ntBASIC3.18□□□□□ -1.9
RAX2Q96IS3 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC3.18□□□□□ -1.9
RAX2Q96IS3 RNY3P15-201ENST00000516297 97 ntBASIC3.18□□□□□ -1.9
RAX2Q96IS3 SNORA40.15-201ENST00000516884 107 ntBASIC3.18□□□□□ -1.9
RAX2Q96IS3 RNU6-1198P-201ENST00000516904 67 ntBASIC3.18□□□□□ -1.9
RAX2Q96IS3 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC3.18□□□□□ -1.9
RAX2Q96IS3 AC034114.1-201ENST00000520293 285 ntBASIC3.18□□□□□ -1.9
RAX2Q96IS3 MIR1254-2-201ENST00000579553 63 ntBASIC3.18□□□□□ -1.9
RAX2Q96IS3 MIR4286-201ENST00000580651 93 ntBASIC3.18□□□□□ -1.9
RAX2Q96IS3 AC107294.3-201ENST00000609211 526 ntBASIC3.18□□□□□ -1.9
RAX2Q96IS3 MIR7702-201ENST00000621931 59 ntBASIC3.18□□□□□ -1.9
RAX2Q96IS3 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
RAX2Q96IS3 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
RAX2Q96IS3 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.18□□□□□ -1.9
RAX2Q96IS3 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.18□□□□□ -1.9
RAX2Q96IS3 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
RAX2Q96IS3 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.18□□□□□ -1.9
RAX2Q96IS3 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
RAX2Q96IS3 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
RAX2Q96IS3 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC3.17□□□□□ -1.9
RAX2Q96IS3 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC3.17□□□□□ -1.9
RAX2Q96IS3 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
RAX2Q96IS3 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
RAX2Q96IS3 OR56A5-201ENST00000340110 738 ntBASIC3.17□□□□□ -1.9
RAX2Q96IS3 RNA5SP361-201ENST00000362686 118 ntBASIC3.17□□□□□ -1.9
RAX2Q96IS3 RNU6-926P-201ENST00000384075 107 ntBASIC3.17□□□□□ -1.9
RAX2Q96IS3 RNU6-378P-201ENST00000384324 107 ntBASIC3.17□□□□□ -1.9
RAX2Q96IS3 RNY3P4-201ENST00000384428 101 ntBASIC3.17□□□□□ -1.9
RAX2Q96IS3 MIR134-201ENST00000385258 73 ntBASIC3.17□□□□□ -1.9
RAX2Q96IS3 RNU6-159P-201ENST00000391080 106 ntBASIC3.17□□□□□ -1.9
RAX2Q96IS3 RN7SKP27-201ENST00000410684 333 ntBASIC3.17□□□□□ -1.9
RAX2Q96IS3 AL356968.1-201ENST00000416622 474 ntBASIC3.17□□□□□ -1.9
RAX2Q96IS3 ELOCP20-201ENST00000422460 345 ntBASIC3.17□□□□□ -1.9
RAX2Q96IS3 HLA-N-201ENST00000437516 135 ntBASIC3.17□□□□□ -1.9
RAX2Q96IS3 RPEP5-201ENST00000441137 268 ntBASIC3.17□□□□□ -1.9
RAX2Q96IS3 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC3.17□□□□□ -1.9
RAX2Q96IS3 AC073910.1-201ENST00000445047 438 ntBASIC3.17□□□□□ -1.9
RAX2Q96IS3 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC3.17□□□□□ -1.9
RAX2Q96IS3 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.17□□□□□ -1.9
RAX2Q96IS3 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC3.17□□□□□ -1.9
RAX2Q96IS3 RPL23AP70-201ENST00000483361 460 ntBASIC3.17□□□□□ -1.9
RAX2Q96IS3 MTND4LP22-201ENST00000508209 276 ntBASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 114.2 ms