Protein–RNA interactions for Protein: Q96F63

CCDC97, Coiled-coil domain-containing protein 97, humanhuman

Predicted RBP Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC97Q96F63 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CCDC97Q96F63 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
CCDC97Q96F63 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
CCDC97Q96F63 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC4.52□□□□□ -1.69
CCDC97Q96F63 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CCDC97Q96F63 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CCDC97Q96F63 AL391987.6-201ENST00000305671 199 ntBASIC4.52□□□□□ -1.69
CCDC97Q96F63 Y_RNA.60-201ENST00000362831 98 ntBASIC4.52□□□□□ -1.69
CCDC97Q96F63 Y_RNA.179-201ENST00000363844 90 ntBASIC4.52□□□□□ -1.69
CCDC97Q96F63 Y_RNA.237-201ENST00000364439 102 ntBASIC4.52□□□□□ -1.69
CCDC97Q96F63 CD24P4-201ENST00000382840 243 ntBASIC4.52□□□□□ -1.69
CCDC97Q96F63 RNU6-1083P-201ENST00000384022 107 ntBASIC4.52□□□□□ -1.69
CCDC97Q96F63 SNORA48.7-201ENST00000391302 135 ntBASIC4.52□□□□□ -1.69
CCDC97Q96F63 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC4.52□□□□□ -1.69
CCDC97Q96F63 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC4.52□□□□□ -1.69
CCDC97Q96F63 AC006517.1-201ENST00000480485 328 ntBASIC4.52□□□□□ -1.69
CCDC97Q96F63 AC145146.1-201ENST00000496370 254 ntBASIC4.52□□□□□ -1.69
CCDC97Q96F63 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC4.52□□□□□ -1.69
CCDC97Q96F63 MTND1P19-201ENST00000511780 315 ntBASIC4.52□□□□□ -1.69
CCDC97Q96F63 RAC1P5-201ENST00000512182 576 ntBASIC4.52□□□□□ -1.69
CCDC97Q96F63 RNA5SP446-201ENST00000515955 82 ntBASIC4.52□□□□□ -1.69
CCDC97Q96F63 RNU6-1023P-201ENST00000516137 106 ntBASIC4.52□□□□□ -1.69
CCDC97Q96F63 DEFB108E-201ENST00000524692 240 ntBASIC4.52□□□□□ -1.69
CCDC97Q96F63 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.52□□□□□ -1.69
CCDC97Q96F63 MDM2-232ENST00000544561 213 ntTSL 5 BASIC4.52□□□□□ -1.69
CCDC97Q96F63 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC4.52□□□□□ -1.69
CCDC97Q96F63 AL357075.2-201ENST00000614906 189 ntBASIC4.52□□□□□ -1.69
CCDC97Q96F63 AC005086.4-201ENST00000623065 213 ntBASIC4.52□□□□□ -1.69
CCDC97Q96F63 AC034229.5-201ENST00000624258 185 ntBASIC4.52□□□□□ -1.69
CCDC97Q96F63 MTND5P35-201ENST00000557537 1720 ntBASIC4.52□□□□□ -1.69
CCDC97Q96F63 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CCDC97Q96F63 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
CCDC97Q96F63 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.51□□□□□ -1.69
CCDC97Q96F63 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CCDC97Q96F63 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CCDC97Q96F63 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC4.51□□□□□ -1.69
CCDC97Q96F63 MIR335-201ENST00000362173 94 ntBASIC4.51□□□□□ -1.69
CCDC97Q96F63 U1.1-201ENST00000384101 164 ntBASIC4.51□□□□□ -1.69
CCDC97Q96F63 RNU6-793P-201ENST00000384233 104 ntBASIC4.51□□□□□ -1.69
CCDC97Q96F63 PVALB-202ENST00000404171 422 ntTSL 2 BASIC4.51□□□□□ -1.69
CCDC97Q96F63 RNU6ATAC23P-201ENST00000408448 123 ntBASIC4.51□□□□□ -1.69
CCDC97Q96F63 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC4.51□□□□□ -1.69
CCDC97Q96F63 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC4.51□□□□□ -1.69
CCDC97Q96F63 AC007395.1-201ENST00000451333 677 ntBASIC4.51□□□□□ -1.69
CCDC97Q96F63 AC073901.1-201ENST00000462471 408 ntBASIC4.51□□□□□ -1.69
CCDC97Q96F63 RPL21P129-201ENST00000491732 478 ntBASIC4.51□□□□□ -1.69
CCDC97Q96F63 RNU6-496P-201ENST00000516145 99 ntBASIC4.51□□□□□ -1.69
CCDC97Q96F63 SCARNA17.1-201ENST00000516211 143 ntBASIC4.51□□□□□ -1.69
CCDC97Q96F63 SCARNA17.2-201ENST00000516334 143 ntBASIC4.51□□□□□ -1.69
CCDC97Q96F63 EIF4A1P12-201ENST00000551910 141 ntBASIC4.51□□□□□ -1.69
CCDC97Q96F63 AC011471.1-201ENST00000585766 187 ntBASIC4.51□□□□□ -1.69
CCDC97Q96F63 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.51□□□□□ -1.69
CCDC97Q96F63 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.51□□□□□ -1.69
CCDC97Q96F63 SCARNA17.4-201ENST00000614296 143 ntBASIC4.51□□□□□ -1.69
CCDC97Q96F63 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.51□□□□□ -1.69
CCDC97Q96F63 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CCDC97Q96F63 AC091564.4-201ENST00000533934 2194 ntBASIC4.51□□□□□ -1.69
CCDC97Q96F63 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
CCDC97Q96F63 AC026241.1-201ENST00000517873 2142 ntBASIC4.51□□□□□ -1.69
CCDC97Q96F63 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CCDC97Q96F63 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CCDC97Q96F63 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.51□□□□□ -1.69
CCDC97Q96F63 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CCDC97Q96F63 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.5□□□□□ -1.69
CCDC97Q96F63 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
CCDC97Q96F63 snoU2_19.1-201ENST00000362361 80 ntBASIC4.5□□□□□ -1.69
CCDC97Q96F63 U3.9-201ENST00000363823 204 ntBASIC4.5□□□□□ -1.69
CCDC97Q96F63 Y_RNA.257-201ENST00000364596 102 ntBASIC4.5□□□□□ -1.69
CCDC97Q96F63 SNORA20.1-201ENST00000364790 130 ntBASIC4.5□□□□□ -1.69
CCDC97Q96F63 RNU6-102P-201ENST00000384485 104 ntBASIC4.5□□□□□ -1.69
CCDC97Q96F63 SNORA70C-201ENST00000384538 135 ntBASIC4.5□□□□□ -1.69
CCDC97Q96F63 Y_RNA.541-201ENST00000384640 113 ntBASIC4.5□□□□□ -1.69
CCDC97Q96F63 Y_RNA.552-201ENST00000384665 112 ntBASIC4.5□□□□□ -1.69
CCDC97Q96F63 MIR548H3-201ENST00000408771 118 ntBASIC4.5□□□□□ -1.69
CCDC97Q96F63 RNU5A-5P-201ENST00000411054 116 ntBASIC4.5□□□□□ -1.69
CCDC97Q96F63 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC4.5□□□□□ -1.69
CCDC97Q96F63 RPL7AP25-201ENST00000423357 805 ntBASIC4.5□□□□□ -1.69
CCDC97Q96F63 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC4.5□□□□□ -1.69
CCDC97Q96F63 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.5□□□□□ -1.69
CCDC97Q96F63 MTND4LP30-201ENST00000454092 297 ntBASIC4.5□□□□□ -1.69
CCDC97Q96F63 RN7SL41P-201ENST00000476144 297 ntBASIC4.5□□□□□ -1.69
CCDC97Q96F63 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.5□□□□□ -1.69
CCDC97Q96F63 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC4.5□□□□□ -1.69
CCDC97Q96F63 RNA5SP112-201ENST00000515937 99 ntBASIC4.5□□□□□ -1.69
CCDC97Q96F63 RNU6-1338P-201ENST00000516328 91 ntBASIC4.5□□□□□ -1.69
CCDC97Q96F63 CYCSP23-201ENST00000519781 313 ntBASIC4.5□□□□□ -1.69
CCDC97Q96F63 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CCDC97Q96F63 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC4.5□□□□□ -1.69
CCDC97Q96F63 MIR3939-201ENST00000582614 106 ntBASIC4.5□□□□□ -1.69
CCDC97Q96F63 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC4.5□□□□□ -1.69
CCDC97Q96F63 AC020914.4-201ENST00000597690 277 ntBASIC4.5□□□□□ -1.69
CCDC97Q96F63 VN1R85P-201ENST00000601587 426 ntBASIC4.5□□□□□ -1.69
CCDC97Q96F63 MZT1P2-201ENST00000604387 248 ntBASIC4.5□□□□□ -1.69
CCDC97Q96F63 AC078938.1-201ENST00000620993 318 ntBASIC4.5□□□□□ -1.69
CCDC97Q96F63 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC4.5□□□□□ -1.69
CCDC97Q96F63 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.5□□□□□ -1.69
CCDC97Q96F63 PTER-201ENST00000298942 3448 ntTSL 5 BASIC4.5□□□□□ -1.69
CCDC97Q96F63 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC4.5□□□□□ -1.69
CCDC97Q96F63 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CCDC97Q96F63 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 120.8 ms