Protein–RNA interactions for Protein: P62312

LSM6, U6 snRNA-associated Sm-like protein LSm6, humanhuman

Known RBP Predictions only

Length 80 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P62312 AC009646.1-201ENST00000510455 318 ntBASIC0.82□□□□□ -2.28
LSM6P62312 AC079140.3-201ENST00000511111 550 ntBASIC0.82□□□□□ -2.28
LSM6P62312 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC0.82□□□□□ -2.28
LSM6P62312 AL512310.8-201ENST00000550183 120 ntBASIC0.82□□□□□ -2.28
LSM6P62312 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC0.82□□□□□ -2.28
LSM6P62312 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC0.82□□□□□ -2.28
LSM6P62312 AL022345.2-201ENST00000606307 135 ntBASIC0.82□□□□□ -2.28
LSM6P62312 BX284668.6-201ENST00000606899 438 ntBASIC0.82□□□□□ -2.28
LSM6P62312 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC0.82□□□□□ -2.28
LSM6P62312 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC0.82□□□□□ -2.28
LSM6P62312 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC0.81□□□□□ -2.28
LSM6P62312 SNORA25-201ENST00000384384 134 ntBASIC0.81□□□□□ -2.28
LSM6P62312 MIR532-201ENST00000385025 91 ntBASIC0.81□□□□□ -2.28
LSM6P62312 SNORA40.2-201ENST00000390847 128 ntBASIC0.81□□□□□ -2.28
LSM6P62312 PIGPP2-201ENST00000411569 458 ntBASIC0.81□□□□□ -2.28
LSM6P62312 AC069282.1-201ENST00000411911 526 ntBASIC0.81□□□□□ -2.28
LSM6P62312 USP9YP33-201ENST00000412220 421 ntBASIC0.81□□□□□ -2.28
LSM6P62312 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC0.81□□□□□ -2.28
LSM6P62312 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC0.81□□□□□ -2.28
LSM6P62312 BTF3L4P1-201ENST00000413813 468 ntBASIC0.81□□□□□ -2.28
LSM6P62312 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC0.81□□□□□ -2.28
LSM6P62312 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC0.81□□□□□ -2.28
LSM6P62312 AC123900.1-201ENST00000420390 96 ntBASIC0.81□□□□□ -2.28
LSM6P62312 AC013410.2-201ENST00000422627 201 ntBASIC0.81□□□□□ -2.28
LSM6P62312 USP9YP11-201ENST00000427537 717 ntBASIC0.81□□□□□ -2.28
LSM6P62312 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC0.81□□□□□ -2.28
LSM6P62312 RPS27P1-201ENST00000450552 247 ntBASIC0.81□□□□□ -2.28
LSM6P62312 RPL31P3-201ENST00000458430 332 ntBASIC0.81□□□□□ -2.28
LSM6P62312 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC0.81□□□□□ -2.28
LSM6P62312 HMGN2P9-201ENST00000476875 229 ntBASIC0.81□□□□□ -2.28
LSM6P62312 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC0.81□□□□□ -2.28
LSM6P62312 RNU5A-4P-201ENST00000516588 111 ntBASIC0.81□□□□□ -2.28
LSM6P62312 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC0.81□□□□□ -2.28
LSM6P62312 AP003465.2-201ENST00000602571 373 ntBASIC0.81□□□□□ -2.28
LSM6P62312 AL138889.2-201ENST00000603883 242 ntBASIC0.81□□□□□ -2.28
LSM6P62312 AL136363.2-201ENST00000604173 851 ntBASIC0.81□□□□□ -2.28
LSM6P62312 AC090578.1-201ENST00000604955 591 ntBASIC0.81□□□□□ -2.28
LSM6P62312 AC006270.3-201ENST00000605967 1036 ntBASIC0.81□□□□□ -2.28
LSM6P62312 AC245297.2-201ENST00000610119 565 ntBASIC0.81□□□□□ -2.28
LSM6P62312 AL021879.1-201ENST00000611756 288 ntBASIC0.81□□□□□ -2.28
LSM6P62312 AC027335.2-201ENST00000624030 375 ntBASIC0.81□□□□□ -2.28
LSM6P62312 AC009033.1-201ENST00000624279 431 ntBASIC0.81□□□□□ -2.28
LSM6P62312 AC010615.1-201ENST00000594254 1764 ntBASIC0.8□□□□□ -2.28
LSM6P62312 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC0.8□□□□□ -2.28
LSM6P62312 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
LSM6P62312 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC0.8□□□□□ -2.28
LSM6P62312 RNU6-190P-201ENST00000384154 102 ntBASIC0.8□□□□□ -2.28
LSM6P62312 AP000275.1-201ENST00000411943 390 ntBASIC0.8□□□□□ -2.28
LSM6P62312 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC0.8□□□□□ -2.28
LSM6P62312 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC0.8□□□□□ -2.28
LSM6P62312 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC0.8□□□□□ -2.28
LSM6P62312 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC0.8□□□□□ -2.28
LSM6P62312 CALM1P1-201ENST00000442082 433 ntBASIC0.8□□□□□ -2.28
LSM6P62312 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
LSM6P62312 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC0.8□□□□□ -2.28
LSM6P62312 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.8□□□□□ -2.28
LSM6P62312 RN7SKP88-201ENST00000516847 250 ntBASIC0.8□□□□□ -2.28
LSM6P62312 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC0.8□□□□□ -2.28
LSM6P62312 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC0.8□□□□□ -2.28
LSM6P62312 AC091135.1-201ENST00000585943 307 ntBASIC0.8□□□□□ -2.28
LSM6P62312 MZT1P2-201ENST00000604387 248 ntBASIC0.8□□□□□ -2.28
LSM6P62312 AL022154.1-201ENST00000604698 785 ntBASIC0.8□□□□□ -2.28
LSM6P62312 7SK.8-201ENST00000612110 250 ntBASIC0.8□□□□□ -2.28
LSM6P62312 MIR6857-201ENST00000613267 93 ntBASIC0.8□□□□□ -2.28
LSM6P62312 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC0.8□□□□□ -2.28
LSM6P62312 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC0.8□□□□□ -2.28
LSM6P62312 7SK.11-201ENST00000615477 250 ntBASIC0.8□□□□□ -2.28
LSM6P62312 7SK.13-201ENST00000622040 250 ntBASIC0.8□□□□□ -2.28
LSM6P62312 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC0.79□□□□□ -2.28
LSM6P62312 RNU6-462P-201ENST00000362659 105 ntBASIC0.79□□□□□ -2.28
LSM6P62312 RNU1-36P-201ENST00000365130 165 ntBASIC0.79□□□□□ -2.28
LSM6P62312 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC0.79□□□□□ -2.28
LSM6P62312 TXNL1P1-201ENST00000429528 554 ntBASIC0.79□□□□□ -2.28
LSM6P62312 AL603825.1-201ENST00000438481 80 ntBASIC0.79□□□□□ -2.28
LSM6P62312 HSPE1P13-201ENST00000451143 297 ntBASIC0.79□□□□□ -2.28
LSM6P62312 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC0.79□□□□□ -2.28
LSM6P62312 snoU109.2-201ENST00000459316 135 ntBASIC0.79□□□□□ -2.28
LSM6P62312 AP003355.1-201ENST00000518956 587 ntBASIC0.79□□□□□ -2.28
LSM6P62312 CYCSP23-201ENST00000519781 313 ntBASIC0.79□□□□□ -2.28
LSM6P62312 LRRC6P1-201ENST00000532188 885 ntBASIC0.79□□□□□ -2.28
LSM6P62312 AC124016.2-201ENST00000610058 665 ntBASIC0.79□□□□□ -2.28
LSM6P62312 AC130324.3-201ENST00000614165 542 ntBASIC0.79□□□□□ -2.28
LSM6P62312 U6.42-201ENST00000618440 107 ntBASIC0.79□□□□□ -2.28
LSM6P62312 AL138955.1-201ENST00000622881 1040 ntBASIC0.79□□□□□ -2.28
LSM6P62312 AC095038.3-201ENST00000634439 195 ntBASIC0.79□□□□□ -2.28
LSM6P62312 RNU6-560P-201ENST00000364007 108 ntBASIC0.78□□□□□ -2.28
LSM6P62312 RNU6-1080P-201ENST00000383982 107 ntBASIC0.78□□□□□ -2.28
LSM6P62312 RNU2-62P-201ENST00000410868 191 ntBASIC0.78□□□□□ -2.28
LSM6P62312 RNU4-22P-201ENST00000411058 166 ntBASIC0.78□□□□□ -2.28
LSM6P62312 ELOCP17-201ENST00000414751 326 ntBASIC0.78□□□□□ -2.28
LSM6P62312 ELOCP9-201ENST00000418624 239 ntBASIC0.78□□□□□ -2.28
LSM6P62312 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC0.78□□□□□ -2.28
LSM6P62312 MTND4P20-201ENST00000424125 869 ntBASIC0.78□□□□□ -2.28
LSM6P62312 AC069257.2-201ENST00000441819 155 ntBASIC0.78□□□□□ -2.28
LSM6P62312 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC0.78□□□□□ -2.28
LSM6P62312 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC0.78□□□□□ -2.28
LSM6P62312 AC108078.2-201ENST00000510750 236 ntBASIC0.78□□□□□ -2.28
LSM6P62312 TRMT112P2-201ENST00000512910 132 ntBASIC0.78□□□□□ -2.28
LSM6P62312 AC108729.3-201ENST00000513484 108 ntBASIC0.78□□□□□ -2.28
LSM6P62312 AC112198.4-201ENST00000515450 351 ntBASIC0.78□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 119.1 ms