Protein–RNA interactions for Protein: P55160

NCKAP1L, Nck-associated protein 1-like, humanhuman

Predictions only

Length 1,127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1LP55160 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.83□□□□□ -1.8
NCKAP1LP55160 AL606753.1-201ENST00000427435 87 ntBASIC3.83□□□□□ -1.8
NCKAP1LP55160 AC079780.1-201ENST00000428259 207 ntBASIC3.83□□□□□ -1.8
NCKAP1LP55160 AP000907.1-201ENST00000428428 510 ntBASIC3.83□□□□□ -1.8
NCKAP1LP55160 TMSB4XP3-201ENST00000445144 114 ntBASIC3.83□□□□□ -1.8
NCKAP1LP55160 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC3.83□□□□□ -1.8
NCKAP1LP55160 HSPE1P25-201ENST00000455484 251 ntBASIC3.83□□□□□ -1.8
NCKAP1LP55160 AC034236.1-201ENST00000469891 373 ntBASIC3.83□□□□□ -1.8
NCKAP1LP55160 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.83□□□□□ -1.8
NCKAP1LP55160 AL049874.1-201ENST00000489560 388 ntBASIC3.83□□□□□ -1.8
NCKAP1LP55160 AL160314.1-201ENST00000490836 438 ntBASIC3.83□□□□□ -1.8
NCKAP1LP55160 SEPT14P8-201ENST00000508026 178 ntBASIC3.83□□□□□ -1.8
NCKAP1LP55160 SCARNA24.2-201ENST00000516968 130 ntBASIC3.83□□□□□ -1.8
NCKAP1LP55160 ATP5F1P5-201ENST00000526403 760 ntBASIC3.83□□□□□ -1.8
NCKAP1LP55160 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.83□□□□□ -1.8
NCKAP1LP55160 AC004024.1-201ENST00000549244 247 ntBASIC3.83□□□□□ -1.8
NCKAP1LP55160 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.83□□□□□ -1.8
NCKAP1LP55160 SNORD84-203ENST00000584275 78 ntBASIC3.83□□□□□ -1.8
NCKAP1LP55160 Z83818.1-201ENST00000603584 150 ntBASIC3.83□□□□□ -1.8
NCKAP1LP55160 RNA5SP108-201ENST00000605921 117 ntBASIC3.83□□□□□ -1.8
NCKAP1LP55160 AC006065.5-201ENST00000623427 349 ntBASIC3.83□□□□□ -1.8
NCKAP1LP55160 AC090617.7-201ENST00000623952 126 ntBASIC3.83□□□□□ -1.8
NCKAP1LP55160 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.83□□□□□ -1.8
NCKAP1LP55160 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
NCKAP1LP55160 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
NCKAP1LP55160 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.83□□□□□ -1.8
NCKAP1LP55160 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
NCKAP1LP55160 AL359693.1-201ENST00000614959 2407 ntBASIC3.82□□□□□ -1.8
NCKAP1LP55160 AP001148.1-201ENST00000624124 2359 ntBASIC3.82□□□□□ -1.8
NCKAP1LP55160 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.82□□□□□ -1.8
NCKAP1LP55160 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
NCKAP1LP55160 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
NCKAP1LP55160 RNU4-35P-201ENST00000362588 141 ntBASIC3.82□□□□□ -1.8
NCKAP1LP55160 RNU6-1301P-201ENST00000362724 104 ntBASIC3.82□□□□□ -1.8
NCKAP1LP55160 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.82□□□□□ -1.8
NCKAP1LP55160 Y_RNA.504-201ENST00000384481 104 ntBASIC3.82□□□□□ -1.8
NCKAP1LP55160 MIR10A-201ENST00000385043 110 ntBASIC3.82□□□□□ -1.8
NCKAP1LP55160 SNORD78.2-201ENST00000391076 69 ntBASIC3.82□□□□□ -1.8
NCKAP1LP55160 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.82□□□□□ -1.8
NCKAP1LP55160 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.82□□□□□ -1.8
NCKAP1LP55160 RPL7P49-201ENST00000471402 708 ntBASIC3.82□□□□□ -1.8
NCKAP1LP55160 AC025518.1-201ENST00000479856 347 ntBASIC3.82□□□□□ -1.8
NCKAP1LP55160 AKIRIN2P1-201ENST00000505898 352 ntBASIC3.82□□□□□ -1.8
NCKAP1LP55160 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.82□□□□□ -1.8
NCKAP1LP55160 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC3.82□□□□□ -1.8
NCKAP1LP55160 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
NCKAP1LP55160 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
NCKAP1LP55160 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.82□□□□□ -1.8
NCKAP1LP55160 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.82□□□□□ -1.8
NCKAP1LP55160 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
NCKAP1LP55160 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
NCKAP1LP55160 AC093908.1-201ENST00000623125 8092 ntBASIC3.82□□□□□ -1.8
NCKAP1LP55160 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.82□□□□□ -1.8
NCKAP1LP55160 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
NCKAP1LP55160 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
NCKAP1LP55160 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC3.81□□□□□ -1.8
NCKAP1LP55160 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.81□□□□□ -1.8
NCKAP1LP55160 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
NCKAP1LP55160 SNORA71.3-201ENST00000362582 128 ntBASIC3.81□□□□□ -1.8
NCKAP1LP55160 RNU4-90P-201ENST00000362773 141 ntBASIC3.81□□□□□ -1.8
NCKAP1LP55160 Y_RNA.123-201ENST00000363338 102 ntBASIC3.81□□□□□ -1.8
NCKAP1LP55160 RNU6-336P-201ENST00000364891 107 ntBASIC3.81□□□□□ -1.8
NCKAP1LP55160 RNA5SP240-201ENST00000365355 128 ntBASIC3.81□□□□□ -1.8
NCKAP1LP55160 RNY1P5-201ENST00000383890 115 ntBASIC3.81□□□□□ -1.8
NCKAP1LP55160 RNU6-937P-201ENST00000384325 106 ntBASIC3.81□□□□□ -1.8
NCKAP1LP55160 AL591043.1-201ENST00000432461 424 ntBASIC3.81□□□□□ -1.8
NCKAP1LP55160 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC3.81□□□□□ -1.8
NCKAP1LP55160 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.81□□□□□ -1.8
NCKAP1LP55160 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.81□□□□□ -1.8
NCKAP1LP55160 AC023824.2-201ENST00000566185 400 ntBASIC3.81□□□□□ -1.8
NCKAP1LP55160 FAM60BP-201ENST00000578364 658 ntBASIC3.81□□□□□ -1.8
NCKAP1LP55160 MIR4659A-201ENST00000580269 81 ntBASIC3.81□□□□□ -1.8
NCKAP1LP55160 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
NCKAP1LP55160 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.81□□□□□ -1.8
NCKAP1LP55160 ZNF826P-207ENST00000622273 1910 ntBASIC3.81□□□□□ -1.8
NCKAP1LP55160 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
NCKAP1LP55160 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.81□□□□□ -1.8
NCKAP1LP55160 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
NCKAP1LP55160 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
NCKAP1LP55160 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
NCKAP1LP55160 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.8□□□□□ -1.8
NCKAP1LP55160 RNU4-9P-201ENST00000364951 139 ntBASIC3.8□□□□□ -1.8
NCKAP1LP55160 RNU6-326P-201ENST00000365480 107 ntBASIC3.8□□□□□ -1.8
NCKAP1LP55160 RNU6-629P-201ENST00000384061 103 ntBASIC3.8□□□□□ -1.8
NCKAP1LP55160 RNA5SP213-201ENST00000391031 106 ntBASIC3.8□□□□□ -1.8
NCKAP1LP55160 RNU6-493P-201ENST00000391321 108 ntBASIC3.8□□□□□ -1.8
NCKAP1LP55160 Y_RNA.602-201ENST00000410535 92 ntBASIC3.8□□□□□ -1.8
NCKAP1LP55160 Y_RNA.626-201ENST00000411288 95 ntBASIC3.8□□□□□ -1.8
NCKAP1LP55160 COX6CP10-201ENST00000416832 224 ntBASIC3.8□□□□□ -1.8
NCKAP1LP55160 RPL21P40-201ENST00000428586 483 ntBASIC3.8□□□□□ -1.8
NCKAP1LP55160 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC3.8□□□□□ -1.8
NCKAP1LP55160 AL357552.1-201ENST00000445254 415 ntBASIC3.8□□□□□ -1.8
NCKAP1LP55160 snoU13.30-201ENST00000458951 104 ntBASIC3.8□□□□□ -1.8
NCKAP1LP55160 RNU7-87P-201ENST00000459343 62 ntBASIC3.8□□□□□ -1.8
NCKAP1LP55160 AC091153.1-201ENST00000466297 402 ntBASIC3.8□□□□□ -1.8
NCKAP1LP55160 RN7SL293P-201ENST00000481765 281 ntBASIC3.8□□□□□ -1.8
NCKAP1LP55160 MRPL42P6-201ENST00000486397 371 ntBASIC3.8□□□□□ -1.8
NCKAP1LP55160 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.8□□□□□ -1.8
NCKAP1LP55160 RNU6-377P-201ENST00000515965 102 ntBASIC3.8□□□□□ -1.8
NCKAP1LP55160 RNA5SP309-201ENST00000516670 106 ntBASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 134.1 ms