Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
RNF144AP50876 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.35□□□□□ -1.71
RNF144AP50876 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
RNF144AP50876 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
RNF144AP50876 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
RNF144AP50876 Y_RNA.310-201ENST00000365063 113 ntBASIC4.35□□□□□ -1.71
RNF144AP50876 RNU1-64P-201ENST00000365443 163 ntBASIC4.35□□□□□ -1.71
RNF144AP50876 RNU6-144P-201ENST00000383951 107 ntBASIC4.35□□□□□ -1.71
RNF144AP50876 PPIAP31-201ENST00000405422 495 ntBASIC4.35□□□□□ -1.71
RNF144AP50876 SNORA11B-201ENST00000408175 129 ntBASIC4.35□□□□□ -1.71
RNF144AP50876 TEX41-205ENST00000431734 529 ntTSL 4 BASIC4.35□□□□□ -1.71
RNF144AP50876 AC006199.1-201ENST00000548728 219 ntBASIC4.35□□□□□ -1.71
RNF144AP50876 uc_338.18-201ENST00000615451 175 ntBASIC4.35□□□□□ -1.71
RNF144AP50876 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.35□□□□□ -1.71
RNF144AP50876 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.35□□□□□ -1.71
RNF144AP50876 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
RNF144AP50876 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
RNF144AP50876 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.35□□□□□ -1.71
RNF144AP50876 MAPK10-286ENST00000641208 8747 ntBASIC4.35□□□□□ -1.71
RNF144AP50876 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
RNF144AP50876 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
RNF144AP50876 AL590240.1-201ENST00000334118 313 ntBASIC4.34□□□□□ -1.71
RNF144AP50876 RNU6-487P-201ENST00000365430 104 ntBASIC4.34□□□□□ -1.71
RNF144AP50876 RNA5SP372-201ENST00000390836 115 ntBASIC4.34□□□□□ -1.71
RNF144AP50876 Y_RNA.584-201ENST00000391090 114 ntBASIC4.34□□□□□ -1.71
RNF144AP50876 NDUFB4P6-201ENST00000436819 366 ntBASIC4.34□□□□□ -1.71
RNF144AP50876 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.34□□□□□ -1.71
RNF144AP50876 VWA8P1-201ENST00000510889 176 ntBASIC4.34□□□□□ -1.71
RNF144AP50876 RNU6-772P-201ENST00000516042 105 ntBASIC4.34□□□□□ -1.71
RNF144AP50876 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC4.34□□□□□ -1.71
RNF144AP50876 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC4.34□□□□□ -1.71
RNF144AP50876 MIR3121-201ENST00000579680 77 ntBASIC4.34□□□□□ -1.71
RNF144AP50876 MIR3667-201ENST00000581025 74 ntBASIC4.34□□□□□ -1.71
RNF144AP50876 AC018692.3-201ENST00000623929 123 ntBASIC4.34□□□□□ -1.71
RNF144AP50876 AC002543.1-201ENST00000299783 1954 ntBASIC4.34□□□□□ -1.71
RNF144AP50876 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC4.34□□□□□ -1.72
RNF144AP50876 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC4.34□□□□□ -1.72
RNF144AP50876 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC4.34□□□□□ -1.72
RNF144AP50876 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.34□□□□□ -1.72
RNF144AP50876 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.72
RNF144AP50876 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
RNF144AP50876 AC022336.2-201ENST00000568966 2538 ntBASIC4.33□□□□□ -1.72
RNF144AP50876 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
RNF144AP50876 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
RNF144AP50876 SNORD96B-201ENST00000386148 79 ntBASIC4.33□□□□□ -1.72
RNF144AP50876 AL591034.1-201ENST00000407447 340 ntBASIC4.33□□□□□ -1.72
RNF144AP50876 AC063976.4-201ENST00000421971 163 ntBASIC4.33□□□□□ -1.72
RNF144AP50876 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC4.33□□□□□ -1.72
RNF144AP50876 HMGN2P10-201ENST00000448085 265 ntBASIC4.33□□□□□ -1.72
RNF144AP50876 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.33□□□□□ -1.72
RNF144AP50876 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC4.33□□□□□ -1.72
RNF144AP50876 AC108022.1-201ENST00000493466 478 ntBASIC4.33□□□□□ -1.72
RNF144AP50876 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC4.33□□□□□ -1.72
RNF144AP50876 RNA5SP154-201ENST00000516193 111 ntBASIC4.33□□□□□ -1.72
RNF144AP50876 RNU1-117P-201ENST00000517041 158 ntBASIC4.33□□□□□ -1.72
RNF144AP50876 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.33□□□□□ -1.72
RNF144AP50876 FAM25E-202ENST00000608562 189 ntBASIC4.33□□□□□ -1.72
RNF144AP50876 AC091953.3-201ENST00000623220 236 ntBASIC4.33□□□□□ -1.72
RNF144AP50876 AC012640.5-201ENST00000623897 319 ntBASIC4.33□□□□□ -1.72
RNF144AP50876 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.33□□□□□ -1.72
RNF144AP50876 AC068205.3-201ENST00000636385 468 ntBASIC4.33□□□□□ -1.72
RNF144AP50876 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.33□□□□□ -1.72
RNF144AP50876 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
RNF144AP50876 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.33□□□□□ -1.72
RNF144AP50876 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC4.33□□□□□ -1.72
RNF144AP50876 FAM35BP-202ENST00000497389 3337 ntBASIC4.33□□□□□ -1.72
RNF144AP50876 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
RNF144AP50876 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.32□□□□□ -1.72
RNF144AP50876 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
RNF144AP50876 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
RNF144AP50876 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
RNF144AP50876 U3.9-201ENST00000363823 204 ntBASIC4.32□□□□□ -1.72
RNF144AP50876 RNU6-1082P-201ENST00000364574 107 ntBASIC4.32□□□□□ -1.72
RNF144AP50876 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC4.32□□□□□ -1.72
RNF144AP50876 RNU6-1279P-201ENST00000383917 103 ntBASIC4.32□□□□□ -1.72
RNF144AP50876 SNORA40.5-201ENST00000391061 128 ntBASIC4.32□□□□□ -1.72
RNF144AP50876 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
RNF144AP50876 RNA5SP113-201ENST00000410486 84 ntBASIC4.32□□□□□ -1.72
RNF144AP50876 AC114755.2-201ENST00000413520 361 ntBASIC4.32□□□□□ -1.72
RNF144AP50876 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.32□□□□□ -1.72
RNF144AP50876 DCLRE1CP1-201ENST00000454630 470 ntBASIC4.32□□□□□ -1.72
RNF144AP50876 RPS29P20-201ENST00000489592 171 ntBASIC4.32□□□□□ -1.72
RNF144AP50876 RNU5F-2P-201ENST00000516066 82 ntBASIC4.32□□□□□ -1.72
RNF144AP50876 RNU6-344P-201ENST00000516635 111 ntBASIC4.32□□□□□ -1.72
RNF144AP50876 ACA59.2-201ENST00000517061 156 ntBASIC4.32□□□□□ -1.72
RNF144AP50876 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.32□□□□□ -1.72
RNF144AP50876 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC4.32□□□□□ -1.72
RNF144AP50876 AC021739.1-201ENST00000559631 174 ntBASIC4.32□□□□□ -1.72
RNF144AP50876 AC027176.1-201ENST00000560204 514 ntBASIC4.32□□□□□ -1.72
RNF144AP50876 AL031274.2-201ENST00000599419 203 ntBASIC4.32□□□□□ -1.72
RNF144AP50876 MIR6853-201ENST00000619642 74 ntBASIC4.32□□□□□ -1.72
RNF144AP50876 AC005086.4-201ENST00000623065 213 ntBASIC4.32□□□□□ -1.72
RNF144AP50876 AC068647.2-201ENST00000637380 353 ntBASIC4.32□□□□□ -1.72
RNF144AP50876 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC4.32□□□□□ -1.72
RNF144AP50876 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
RNF144AP50876 DPY19L2P2-203ENST00000435536 1858 ntBASIC4.32□□□□□ -1.72
RNF144AP50876 CENPCP1-201ENST00000533085 2578 ntBASIC4.32□□□□□ -1.72
RNF144AP50876 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
RNF144AP50876 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
RNF144AP50876 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 110.4 ms