Protein–RNA interactions for Protein: P40937

RFC5, Replication factor C subunit 5, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5P40937 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC4.82□□□□□ -1.64
RFC5P40937 AC005086.4-201ENST00000623065 213 ntBASIC4.82□□□□□ -1.64
RFC5P40937 MIR3653-201ENST00000625572 110 ntBASIC4.82□□□□□ -1.64
RFC5P40937 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
RFC5P40937 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
RFC5P40937 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.81□□□□□ -1.64
RFC5P40937 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
RFC5P40937 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.81□□□□□ -1.64
RFC5P40937 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.81□□□□□ -1.64
RFC5P40937 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
RFC5P40937 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.81□□□□□ -1.64
RFC5P40937 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
RFC5P40937 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.81□□□□□ -1.64
RFC5P40937 SNORD114-19-201ENST00000363072 75 ntBASIC4.81□□□□□ -1.64
RFC5P40937 Y_RNA.571-201ENST00000384753 98 ntBASIC4.81□□□□□ -1.64
RFC5P40937 MIR147B-201ENST00000390185 80 ntBASIC4.81□□□□□ -1.64
RFC5P40937 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
RFC5P40937 HDGFP1-201ENST00000405943 252 ntBASIC4.81□□□□□ -1.64
RFC5P40937 RNU2-37P-201ENST00000410695 177 ntBASIC4.81□□□□□ -1.64
RFC5P40937 AC023141.4-201ENST00000412031 328 ntBASIC4.81□□□□□ -1.64
RFC5P40937 RPL35AP15-201ENST00000468042 339 ntBASIC4.81□□□□□ -1.64
RFC5P40937 AL592156.1-201ENST00000508758 304 ntBASIC4.81□□□□□ -1.64
RFC5P40937 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
RFC5P40937 PARP4P3-201ENST00000510265 317 ntBASIC4.81□□□□□ -1.64
RFC5P40937 HMGB3P3-201ENST00000510526 400 ntBASIC4.81□□□□□ -1.64
RFC5P40937 RNU6-107P-201ENST00000516643 102 ntBASIC4.81□□□□□ -1.64
RFC5P40937 ATP5J2P6-201ENST00000565203 266 ntBASIC4.81□□□□□ -1.64
RFC5P40937 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC4.81□□□□□ -1.64
RFC5P40937 HOTTIP_4.1-201ENST00000618195 165 ntBASIC4.81□□□□□ -1.64
RFC5P40937 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
RFC5P40937 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC4.81□□□□□ -1.64
RFC5P40937 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.8□□□□□ -1.64
RFC5P40937 Y_RNA.7-201ENST00000362352 102 ntBASIC4.8□□□□□ -1.64
RFC5P40937 ACEA_U3.1-201ENST00000363057 217 ntBASIC4.8□□□□□ -1.64
RFC5P40937 RNU6-324P-201ENST00000363957 106 ntBASIC4.8□□□□□ -1.64
RFC5P40937 RNA5SP372-201ENST00000390836 115 ntBASIC4.8□□□□□ -1.64
RFC5P40937 AL133475.1-201ENST00000404414 305 ntBASIC4.8□□□□□ -1.64
RFC5P40937 U3.39-201ENST00000408569 239 ntBASIC4.8□□□□□ -1.64
RFC5P40937 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.8□□□□□ -1.64
RFC5P40937 AL714022.1-201ENST00000439897 151 ntBASIC4.8□□□□□ -1.64
RFC5P40937 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.8□□□□□ -1.64
RFC5P40937 snoU13.14-201ENST00000459372 104 ntBASIC4.8□□□□□ -1.64
RFC5P40937 RNU7-23P-201ENST00000459465 62 ntBASIC4.8□□□□□ -1.64
RFC5P40937 RN7SL691P-201ENST00000494487 301 ntBASIC4.8□□□□□ -1.64
RFC5P40937 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC4.8□□□□□ -1.64
RFC5P40937 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.8□□□□□ -1.64
RFC5P40937 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.8□□□□□ -1.64
RFC5P40937 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC4.8□□□□□ -1.64
RFC5P40937 AC011471.1-201ENST00000585766 187 ntBASIC4.8□□□□□ -1.64
RFC5P40937 AL008718.3-201ENST00000610217 321 ntBASIC4.8□□□□□ -1.64
RFC5P40937 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC4.8□□□□□ -1.64
RFC5P40937 AL445567.2-201ENST00000618935 498 ntBASIC4.8□□□□□ -1.64
RFC5P40937 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
RFC5P40937 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
RFC5P40937 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.8□□□□□ -1.64
RFC5P40937 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC4.8□□□□□ -1.64
RFC5P40937 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.79□□□□□ -1.64
RFC5P40937 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.79□□□□□ -1.64
RFC5P40937 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
RFC5P40937 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
RFC5P40937 AC015813.6-201ENST00000624409 5808 ntBASIC4.79□□□□□ -1.64
RFC5P40937 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.79□□□□□ -1.64
RFC5P40937 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
RFC5P40937 AL157831.1-201ENST00000426134 473 ntBASIC4.79□□□□□ -1.64
RFC5P40937 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.79□□□□□ -1.64
RFC5P40937 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC4.79□□□□□ -1.64
RFC5P40937 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC4.79□□□□□ -1.64
RFC5P40937 AP003730.1-201ENST00000524605 285 ntBASIC4.79□□□□□ -1.64
RFC5P40937 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC4.79□□□□□ -1.64
RFC5P40937 AC012493.2-201ENST00000595083 291 ntBASIC4.79□□□□□ -1.64
RFC5P40937 AC025946.2-201ENST00000603398 234 ntBASIC4.79□□□□□ -1.64
RFC5P40937 ARF4P1-201ENST00000605447 541 ntBASIC4.79□□□□□ -1.64
RFC5P40937 SNORD11B-201ENST00000607707 90 ntBASIC4.79□□□□□ -1.64
RFC5P40937 FAM27D1-201ENST00000612308 341 ntBASIC4.79□□□□□ -1.64
RFC5P40937 PCGEM1.1-201ENST00000613431 131 ntBASIC4.79□□□□□ -1.64
RFC5P40937 AL138880.2-201ENST00000616214 239 ntBASIC4.79□□□□□ -1.64
RFC5P40937 AL034408.1-202ENST00000636088 415 ntBASIC4.79□□□□□ -1.64
RFC5P40937 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC4.79□□□□□ -1.64
RFC5P40937 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
RFC5P40937 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
RFC5P40937 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.79□□□□□ -1.64
RFC5P40937 AC002546.1-201ENST00000588041 2504 ntBASIC4.79□□□□□ -1.64
RFC5P40937 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
RFC5P40937 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.79□□□□□ -1.64
RFC5P40937 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
RFC5P40937 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.78□□□□□ -1.64
RFC5P40937 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
RFC5P40937 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
RFC5P40937 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
RFC5P40937 MIR383-201ENST00000362257 73 ntBASIC4.78□□□□□ -1.64
RFC5P40937 RNU6-312P-201ENST00000364629 107 ntBASIC4.78□□□□□ -1.64
RFC5P40937 Y_RNA.272-201ENST00000364696 102 ntBASIC4.78□□□□□ -1.64
RFC5P40937 Y_RNA.329-201ENST00000365209 107 ntBASIC4.78□□□□□ -1.64
RFC5P40937 Y_RNA.580-201ENST00000391004 95 ntBASIC4.78□□□□□ -1.64
RFC5P40937 RNU6ATAC19P-201ENST00000408096 110 ntBASIC4.78□□□□□ -1.64
RFC5P40937 RNA5SP201-201ENST00000410316 124 ntBASIC4.78□□□□□ -1.64
RFC5P40937 BMS1P22-201ENST00000414726 313 ntBASIC4.78□□□□□ -1.64
RFC5P40937 AL451074.5-201ENST00000415894 435 ntBASIC4.78□□□□□ -1.64
RFC5P40937 AC105137.1-201ENST00000484355 562 ntBASIC4.78□□□□□ -1.64
RFC5P40937 RNA5SP49-201ENST00000516450 115 ntBASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms