Protein–RNA interactions for Protein: P14543

NID1, Nidogen-1, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NID1P14543 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.13□□□□□ -1.75
NID1P14543 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
NID1P14543 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.12□□□□□ -1.75
NID1P14543 NOL8P1-201ENST00000508336 3529 ntBASIC4.12□□□□□ -1.75
NID1P14543 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
NID1P14543 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
NID1P14543 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
NID1P14543 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
NID1P14543 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
NID1P14543 RNU6-915P-201ENST00000364943 103 ntBASIC4.12□□□□□ -1.75
NID1P14543 SNORA72.4-201ENST00000384174 132 ntBASIC4.12□□□□□ -1.75
NID1P14543 MIR659-201ENST00000384963 97 ntBASIC4.12□□□□□ -1.75
NID1P14543 MIR320B2-201ENST00000408479 138 ntBASIC4.12□□□□□ -1.75
NID1P14543 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC4.12□□□□□ -1.75
NID1P14543 AL135790.2-201ENST00000437701 267 ntBASIC4.12□□□□□ -1.75
NID1P14543 HMGB1P37-201ENST00000439613 609 ntBASIC4.12□□□□□ -1.75
NID1P14543 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.12□□□□□ -1.75
NID1P14543 AL162591.2-201ENST00000449634 317 ntBASIC4.12□□□□□ -1.75
NID1P14543 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC4.12□□□□□ -1.75
NID1P14543 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC4.12□□□□□ -1.75
NID1P14543 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC4.12□□□□□ -1.75
NID1P14543 RNA5SP497-201ENST00000516081 97 ntBASIC4.12□□□□□ -1.75
NID1P14543 RNU6-168P-201ENST00000516189 101 ntBASIC4.12□□□□□ -1.75
NID1P14543 SNORA70.16-201ENST00000516390 95 ntBASIC4.12□□□□□ -1.75
NID1P14543 AC100770.1-201ENST00000532310 322 ntBASIC4.12□□□□□ -1.75
NID1P14543 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC4.12□□□□□ -1.75
NID1P14543 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC4.12□□□□□ -1.75
NID1P14543 AC007546.2-201ENST00000623996 360 ntBASIC4.12□□□□□ -1.75
NID1P14543 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
NID1P14543 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
NID1P14543 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
NID1P14543 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.12□□□□□ -1.75
NID1P14543 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.12□□□□□ -1.75
NID1P14543 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
NID1P14543 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.12□□□□□ -1.75
NID1P14543 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.11□□□□□ -1.75
NID1P14543 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.11□□□□□ -1.75
NID1P14543 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
NID1P14543 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
NID1P14543 RNU1-62P-201ENST00000362599 164 ntBASIC4.11□□□□□ -1.75
NID1P14543 RNU1-100P-201ENST00000365255 165 ntBASIC4.11□□□□□ -1.75
NID1P14543 RNU6-1264P-201ENST00000383891 107 ntBASIC4.11□□□□□ -1.75
NID1P14543 RNU6-969P-201ENST00000383900 105 ntBASIC4.11□□□□□ -1.75
NID1P14543 Y_RNA.521-201ENST00000384560 114 ntBASIC4.11□□□□□ -1.75
NID1P14543 RNU6-768P-201ENST00000384683 107 ntBASIC4.11□□□□□ -1.75
NID1P14543 MIR526A2-201ENST00000390198 65 ntBASIC4.11□□□□□ -1.75
NID1P14543 SNORA26.3-201ENST00000391119 136 ntBASIC4.11□□□□□ -1.75
NID1P14543 RNU6-710P-201ENST00000410424 105 ntBASIC4.11□□□□□ -1.75
NID1P14543 AC244098.2-201ENST00000422068 99 ntBASIC4.11□□□□□ -1.75
NID1P14543 RPEP3-201ENST00000425462 676 ntBASIC4.11□□□□□ -1.75
NID1P14543 AC125238.1-201ENST00000448842 249 ntBASIC4.11□□□□□ -1.75
NID1P14543 AC146507.2-201ENST00000460608 476 ntBASIC4.11□□□□□ -1.75
NID1P14543 RPL23AP70-201ENST00000483361 460 ntBASIC4.11□□□□□ -1.75
NID1P14543 AP001781.1-201ENST00000530977 207 ntBASIC4.11□□□□□ -1.75
NID1P14543 RPL23AP97-201ENST00000568955 471 ntBASIC4.11□□□□□ -1.75
NID1P14543 AL138721.1-201ENST00000616756 179 ntBASIC4.11□□□□□ -1.75
NID1P14543 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
NID1P14543 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC4.11□□□□□ -1.75
NID1P14543 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.11□□□□□ -1.75
NID1P14543 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
NID1P14543 ZNF702P-202ENST00000434269 1966 ntBASIC4.11□□□□□ -1.75
NID1P14543 OR56B2P-202ENST00000641377 2453 ntBASIC4.11□□□□□ -1.75
NID1P14543 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.1□□□□□ -1.75
NID1P14543 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.1□□□□□ -1.75
NID1P14543 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
NID1P14543 RNU6-799P-201ENST00000363567 107 ntBASIC4.1□□□□□ -1.75
NID1P14543 SNORA18.3-201ENST00000384122 132 ntBASIC4.1□□□□□ -1.75
NID1P14543 MIR549A-201ENST00000385268 96 ntBASIC4.1□□□□□ -1.75
NID1P14543 RNU6-588P-201ENST00000410281 105 ntBASIC4.1□□□□□ -1.75
NID1P14543 AL158823.1-201ENST00000418441 478 ntBASIC4.1□□□□□ -1.75
NID1P14543 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC4.1□□□□□ -1.75
NID1P14543 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
NID1P14543 RPL37P4-201ENST00000448908 268 ntBASIC4.1□□□□□ -1.75
NID1P14543 RPS27P1-201ENST00000450552 247 ntBASIC4.1□□□□□ -1.75
NID1P14543 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC4.1□□□□□ -1.75
NID1P14543 RPL7AP28-201ENST00000464513 571 ntBASIC4.1□□□□□ -1.75
NID1P14543 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.1□□□□□ -1.75
NID1P14543 RNA5SP108-201ENST00000605921 117 ntBASIC4.1□□□□□ -1.75
NID1P14543 MIR6134-201ENST00000617606 109 ntBASIC4.1□□□□□ -1.75
NID1P14543 AL773545.4-201ENST00000637262 310 ntBASIC4.1□□□□□ -1.75
NID1P14543 MIR3914-2-201ENST00000637339 95 ntBASIC4.1□□□□□ -1.75
NID1P14543 AL513478.4-201ENST00000641636 310 ntBASIC4.1□□□□□ -1.75
NID1P14543 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
NID1P14543 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
NID1P14543 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC4.1□□□□□ -1.75
NID1P14543 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
NID1P14543 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
NID1P14543 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
NID1P14543 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.09□□□□□ -1.75
NID1P14543 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
NID1P14543 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
NID1P14543 AL133383.2-201ENST00000622958 2336 ntBASIC4.09□□□□□ -1.75
NID1P14543 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
NID1P14543 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC4.09□□□□□ -1.75
NID1P14543 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
NID1P14543 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
NID1P14543 RNA5SP447-201ENST00000363749 119 ntBASIC4.09□□□□□ -1.75
NID1P14543 RNU6-1048P-201ENST00000364054 107 ntBASIC4.09□□□□□ -1.75
NID1P14543 SNORA25.7-201ENST00000364375 127 ntBASIC4.09□□□□□ -1.75
NID1P14543 Y_RNA.393-201ENST00000383936 102 ntBASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 119.5 ms