Protein–RNA interactions for Protein: P0CG47

UBB, Polyubiquitin-B, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP0CG47 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC0.82□□□□□ -2.28
UBBP0CG47 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC0.82□□□□□ -2.28
UBBP0CG47 BNIP3P6-201ENST00000549284 499 ntBASIC0.82□□□□□ -2.28
UBBP0CG47 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.82□□□□□ -2.28
UBBP0CG47 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC0.82□□□□□ -2.28
UBBP0CG47 AC091135.1-201ENST00000585943 307 ntBASIC0.82□□□□□ -2.28
UBBP0CG47 AC005786.1-201ENST00000588553 154 ntBASIC0.82□□□□□ -2.28
UBBP0CG47 AL136363.2-201ENST00000604173 851 ntBASIC0.82□□□□□ -2.28
UBBP0CG47 AC107308.1-201ENST00000615897 301 ntBASIC0.82□□□□□ -2.28
UBBP0CG47 RN7SL853P-201ENST00000617250 223 ntBASIC0.82□□□□□ -2.28
UBBP0CG47 AC131159.1-201ENST00000621854 213 ntBASIC0.82□□□□□ -2.28
UBBP0CG47 RMST_7.1-201ENST00000621935 268 ntBASIC0.82□□□□□ -2.28
UBBP0CG47 PLD1-217ENST00000627725 174 ntTSL 5 BASIC0.82□□□□□ -2.28
UBBP0CG47 AL391516.1-201ENST00000554380 2449 ntBASIC0.81□□□□□ -2.28
UBBP0CG47 OR4G2P-201ENST00000328113 903 ntBASIC0.81□□□□□ -2.28
UBBP0CG47 RNA5SP327-201ENST00000362494 101 ntBASIC0.81□□□□□ -2.28
UBBP0CG47 Y_RNA.97-201ENST00000363094 102 ntBASIC0.81□□□□□ -2.28
UBBP0CG47 RNY4P16-201ENST00000364768 94 ntBASIC0.81□□□□□ -2.28
UBBP0CG47 RNU6-1222P-201ENST00000384615 107 ntBASIC0.81□□□□□ -2.28
UBBP0CG47 RNA5SP213-201ENST00000391031 106 ntBASIC0.81□□□□□ -2.28
UBBP0CG47 RPS20P2-201ENST00000402520 389 ntBASIC0.81□□□□□ -2.28
UBBP0CG47 EEF1A1P40-201ENST00000412883 573 ntBASIC0.81□□□□□ -2.28
UBBP0CG47 BTF3L4P1-201ENST00000413813 468 ntBASIC0.81□□□□□ -2.28
UBBP0CG47 NCOR1P3-201ENST00000420479 303 ntBASIC0.81□□□□□ -2.28
UBBP0CG47 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC0.81□□□□□ -2.28
UBBP0CG47 C8orf59P1-201ENST00000429930 303 ntBASIC0.81□□□□□ -2.28
UBBP0CG47 UBE2V1P8-201ENST00000437166 265 ntBASIC0.81□□□□□ -2.28
UBBP0CG47 AC027119.1-201ENST00000440877 241 ntBASIC0.81□□□□□ -2.28
UBBP0CG47 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC0.81□□□□□ -2.28
UBBP0CG47 RPL23AP35-201ENST00000451906 501 ntBASIC0.81□□□□□ -2.28
UBBP0CG47 MTND1P12-201ENST00000455231 147 ntBASIC0.81□□□□□ -2.28
UBBP0CG47 RNU1-131P-201ENST00000458943 161 ntBASIC0.81□□□□□ -2.28
UBBP0CG47 RNU6-333P-201ENST00000459117 107 ntBASIC0.81□□□□□ -2.28
UBBP0CG47 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.81□□□□□ -2.28
UBBP0CG47 AC016550.1-201ENST00000505348 785 ntBASIC0.81□□□□□ -2.28
UBBP0CG47 UBL5P1-201ENST00000507979 193 ntBASIC0.81□□□□□ -2.28
UBBP0CG47 HSPE1P23-201ENST00000509838 286 ntBASIC0.81□□□□□ -2.28
UBBP0CG47 RNU1-86P-201ENST00000516108 154 ntBASIC0.81□□□□□ -2.28
UBBP0CG47 RNU1-107P-201ENST00000516617 154 ntBASIC0.81□□□□□ -2.28
UBBP0CG47 RNU6-201P-201ENST00000517100 61 ntBASIC0.81□□□□□ -2.28
UBBP0CG47 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC0.81□□□□□ -2.28
UBBP0CG47 AC137800.2-201ENST00000574375 120 ntBASIC0.81□□□□□ -2.28
UBBP0CG47 AC009977.1-201ENST00000586015 570 ntBASIC0.81□□□□□ -2.28
UBBP0CG47 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC0.81□□□□□ -2.28
UBBP0CG47 AC092106.3-201ENST00000611308 722 ntBASIC0.81□□□□□ -2.28
UBBP0CG47 AL078604.3-201ENST00000615580 211 ntBASIC0.81□□□□□ -2.28
UBBP0CG47 AC012676.2-201ENST00000619258 186 ntBASIC0.81□□□□□ -2.28
UBBP0CG47 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC0.8□□□□□ -2.28
UBBP0CG47 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC0.8□□□□□ -2.28
UBBP0CG47 LINC02555-201ENST00000563933 1951 ntBASIC0.8□□□□□ -2.28
UBBP0CG47 RNU6-1242P-201ENST00000391052 103 ntBASIC0.8□□□□□ -2.28
UBBP0CG47 RPS3AP36-201ENST00000398190 775 ntBASIC0.8□□□□□ -2.28
UBBP0CG47 RNU2-62P-201ENST00000410868 191 ntBASIC0.8□□□□□ -2.28
UBBP0CG47 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC0.8□□□□□ -2.28
UBBP0CG47 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC0.8□□□□□ -2.28
UBBP0CG47 TRIM60P10Y-201ENST00000425589 751 ntBASIC0.8□□□□□ -2.28
UBBP0CG47 RPL23AP30-201ENST00000432419 501 ntBASIC0.8□□□□□ -2.28
UBBP0CG47 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
UBBP0CG47 OR2AQ1P-201ENST00000451972 200 ntBASIC0.8□□□□□ -2.28
UBBP0CG47 RNA5SP404-201ENST00000517118 132 ntBASIC0.8□□□□□ -2.28
UBBP0CG47 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC0.8□□□□□ -2.28
UBBP0CG47 AC013244.2-201ENST00000603396 103 ntBASIC0.8□□□□□ -2.28
UBBP0CG47 AC123912.5-201ENST00000605470 343 ntBASIC0.8□□□□□ -2.28
UBBP0CG47 AP002360.4-201ENST00000606980 481 ntBASIC0.8□□□□□ -2.28
UBBP0CG47 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC0.8□□□□□ -2.28
UBBP0CG47 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC0.8□□□□□ -2.28
UBBP0CG47 AC063943.3-201ENST00000615562 356 ntBASIC0.8□□□□□ -2.28
UBBP0CG47 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC0.8□□□□□ -2.28
UBBP0CG47 AL445523.1-201ENST00000451184 1362 ntBASIC0.8□□□□□ -2.28
UBBP0CG47 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC0.79□□□□□ -2.28
UBBP0CG47 RNY4P24-201ENST00000362735 96 ntBASIC0.79□□□□□ -2.28
UBBP0CG47 RNU4-1-201ENST00000363925 141 ntBASIC0.79□□□□□ -2.28
UBBP0CG47 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC0.79□□□□□ -2.28
UBBP0CG47 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC0.79□□□□□ -2.28
UBBP0CG47 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC0.79□□□□□ -2.28
UBBP0CG47 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC0.79□□□□□ -2.28
UBBP0CG47 RPS23P4-201ENST00000487908 423 ntBASIC0.79□□□□□ -2.28
UBBP0CG47 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC0.79□□□□□ -2.28
UBBP0CG47 RNA5SP437-201ENST00000517249 129 ntBASIC0.79□□□□□ -2.28
UBBP0CG47 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC0.79□□□□□ -2.28
UBBP0CG47 AC105185.1-201ENST00000518705 535 ntBASIC0.79□□□□□ -2.28
UBBP0CG47 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC0.79□□□□□ -2.28
UBBP0CG47 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC0.79□□□□□ -2.28
UBBP0CG47 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC0.79□□□□□ -2.28
UBBP0CG47 UBE2Q2P8-201ENST00000560644 102 ntBASIC0.79□□□□□ -2.28
UBBP0CG47 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC0.79□□□□□ -2.28
UBBP0CG47 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC0.79□□□□□ -2.28
UBBP0CG47 MIR3118-1-201ENST00000581787 76 ntBASIC0.79□□□□□ -2.28
UBBP0CG47 AP003465.2-201ENST00000602571 373 ntBASIC0.79□□□□□ -2.28
UBBP0CG47 DEFB131E-202ENST00000602581 683 ntBASIC0.79□□□□□ -2.28
UBBP0CG47 AC069431.2-201ENST00000604149 1099 ntBASIC0.79□□□□□ -2.28
UBBP0CG47 AC008993.2-201ENST00000631744 806 ntBASIC0.79□□□□□ -2.28
UBBP0CG47 AC095038.3-201ENST00000634439 195 ntBASIC0.79□□□□□ -2.28
UBBP0CG47 MTND4P16-201ENST00000466108 1367 ntBASIC0.79□□□□□ -2.28
UBBP0CG47 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC0.78□□□□□ -2.28
UBBP0CG47 RNU6-78P-201ENST00000362897 107 ntBASIC0.78□□□□□ -2.28
UBBP0CG47 SNORD56.1-201ENST00000362913 68 ntBASIC0.78□□□□□ -2.28
UBBP0CG47 RNU4-92P-201ENST00000363783 136 ntBASIC0.78□□□□□ -2.28
UBBP0CG47 SNORD1A-201ENST00000364968 72 ntBASIC0.78□□□□□ -2.28
UBBP0CG47 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC0.78□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 127.4 ms