Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.9□□□□□ -1.62
HOXA2O43364 AC068700.1-201ENST00000565862 3754 ntBASIC4.9□□□□□ -1.62
HOXA2O43364 RNU6-50P-201ENST00000362356 103 ntBASIC4.9□□□□□ -1.63
HOXA2O43364 RNU6-1048P-201ENST00000364054 107 ntBASIC4.9□□□□□ -1.63
HOXA2O43364 Y_RNA.572-201ENST00000384757 98 ntBASIC4.9□□□□□ -1.63
HOXA2O43364 MIR15B-201ENST00000385045 98 ntBASIC4.9□□□□□ -1.63
HOXA2O43364 RNU6-855P-201ENST00000410395 104 ntBASIC4.9□□□□□ -1.63
HOXA2O43364 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.9□□□□□ -1.63
HOXA2O43364 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC4.9□□□□□ -1.63
HOXA2O43364 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC4.9□□□□□ -1.63
HOXA2O43364 AC108022.1-201ENST00000493466 478 ntBASIC4.9□□□□□ -1.63
HOXA2O43364 CYCTP-201ENST00000504253 315 ntBASIC4.9□□□□□ -1.63
HOXA2O43364 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.9□□□□□ -1.63
HOXA2O43364 RNU6-344P-201ENST00000516635 111 ntBASIC4.9□□□□□ -1.63
HOXA2O43364 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC4.9□□□□□ -1.63
HOXA2O43364 AP001328.1-201ENST00000528550 176 ntBASIC4.9□□□□□ -1.63
HOXA2O43364 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
HOXA2O43364 AC006199.1-201ENST00000548728 219 ntBASIC4.9□□□□□ -1.63
HOXA2O43364 AC007224.1-201ENST00000564410 144 ntBASIC4.9□□□□□ -1.63
HOXA2O43364 AC105137.2-201ENST00000569073 466 ntBASIC4.9□□□□□ -1.63
HOXA2O43364 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC4.9□□□□□ -1.63
HOXA2O43364 AP001340.1-201ENST00000624405 217 ntBASIC4.9□□□□□ -1.63
HOXA2O43364 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
HOXA2O43364 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
HOXA2O43364 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.63
HOXA2O43364 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC4.9□□□□□ -1.63
HOXA2O43364 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.89□□□□□ -1.63
HOXA2O43364 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
HOXA2O43364 IL33-203ENST00000456383 2501 ntTSL 5 BASIC4.89□□□□□ -1.63
HOXA2O43364 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
HOXA2O43364 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
HOXA2O43364 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
HOXA2O43364 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC4.89□□□□□ -1.63
HOXA2O43364 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
HOXA2O43364 SNORA63.4-201ENST00000362763 126 ntBASIC4.89□□□□□ -1.63
HOXA2O43364 RNU6-1205P-201ENST00000363625 106 ntBASIC4.89□□□□□ -1.63
HOXA2O43364 RNA5SP479-201ENST00000364858 117 ntBASIC4.89□□□□□ -1.63
HOXA2O43364 Y_RNA.368-201ENST00000365547 113 ntBASIC4.89□□□□□ -1.63
HOXA2O43364 RPS26P8-201ENST00000393490 348 ntBASIC4.89□□□□□ -1.63
HOXA2O43364 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC4.89□□□□□ -1.63
HOXA2O43364 AC006499.6-201ENST00000511169 607 ntBASIC4.89□□□□□ -1.63
HOXA2O43364 RAC1P5-201ENST00000512182 576 ntBASIC4.89□□□□□ -1.63
HOXA2O43364 AL034555.1-201ENST00000604816 211 ntBASIC4.89□□□□□ -1.63
HOXA2O43364 U7.2-201ENST00000607576 63 ntBASIC4.89□□□□□ -1.63
HOXA2O43364 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
HOXA2O43364 MIR6844-201ENST00000637122 62 ntBASIC4.89□□□□□ -1.63
HOXA2O43364 AC027290.2-201ENST00000623210 18662 ntBASIC4.89□□□□□ -1.63
HOXA2O43364 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
HOXA2O43364 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
HOXA2O43364 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.89□□□□□ -1.63
HOXA2O43364 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
HOXA2O43364 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
HOXA2O43364 DHX9P1-201ENST00000436565 3076 ntBASIC4.88□□□□□ -1.63
HOXA2O43364 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
HOXA2O43364 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
HOXA2O43364 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
HOXA2O43364 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
HOXA2O43364 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
HOXA2O43364 RNU6-600P-201ENST00000362524 99 ntBASIC4.88□□□□□ -1.63
HOXA2O43364 Y_RNA.43-201ENST00000362670 111 ntBASIC4.88□□□□□ -1.63
HOXA2O43364 Y_RNA.341-201ENST00000365341 102 ntBASIC4.88□□□□□ -1.63
HOXA2O43364 Y_RNA.456-201ENST00000384232 111 ntBASIC4.88□□□□□ -1.63
HOXA2O43364 RNU6-460P-201ENST00000391158 108 ntBASIC4.88□□□□□ -1.63
HOXA2O43364 SNORA57.1-201ENST00000391227 145 ntBASIC4.88□□□□□ -1.63
HOXA2O43364 TOMM22P2-201ENST00000430735 237 ntBASIC4.88□□□□□ -1.63
HOXA2O43364 AC084357.1-201ENST00000473404 255 ntBASIC4.88□□□□□ -1.63
HOXA2O43364 AC092991.1-201ENST00000477176 376 ntBASIC4.88□□□□□ -1.63
HOXA2O43364 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC4.88□□□□□ -1.63
HOXA2O43364 RNA5SP309-201ENST00000516670 106 ntBASIC4.88□□□□□ -1.63
HOXA2O43364 MRPL49P2-201ENST00000521066 465 ntBASIC4.88□□□□□ -1.63
HOXA2O43364 AC011602.1-201ENST00000546484 331 ntBASIC4.88□□□□□ -1.63
HOXA2O43364 ARF4P1-201ENST00000605447 541 ntBASIC4.88□□□□□ -1.63
HOXA2O43364 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC4.88□□□□□ -1.63
HOXA2O43364 Xist_exon1.1-201ENST00000618930 85 ntBASIC4.88□□□□□ -1.63
HOXA2O43364 AL445567.2-201ENST00000618935 498 ntBASIC4.88□□□□□ -1.63
HOXA2O43364 AC068205.3-201ENST00000636385 468 ntBASIC4.88□□□□□ -1.63
HOXA2O43364 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.88□□□□□ -1.63
HOXA2O43364 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.88□□□□□ -1.63
HOXA2O43364 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.88□□□□□ -1.63
HOXA2O43364 CPHL1P-201ENST00000461341 3407 ntBASIC4.88□□□□□ -1.63
HOXA2O43364 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
HOXA2O43364 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
HOXA2O43364 AC092376.2-201ENST00000622621 4116 ntBASIC4.87□□□□□ -1.63
HOXA2O43364 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
HOXA2O43364 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.87□□□□□ -1.63
HOXA2O43364 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC4.87□□□□□ -1.63
HOXA2O43364 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
HOXA2O43364 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.87□□□□□ -1.63
HOXA2O43364 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
HOXA2O43364 RNA5SP366-201ENST00000365454 123 ntBASIC4.87□□□□□ -1.63
HOXA2O43364 RNA5SP187-201ENST00000384400 119 ntBASIC4.87□□□□□ -1.63
HOXA2O43364 RPL23AP48-201ENST00000406913 488 ntBASIC4.87□□□□□ -1.63
HOXA2O43364 HSPE1P12-201ENST00000412576 301 ntBASIC4.87□□□□□ -1.63
HOXA2O43364 CKS1BP6-201ENST00000424932 240 ntBASIC4.87□□□□□ -1.63
HOXA2O43364 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC4.87□□□□□ -1.63
HOXA2O43364 RN7SL41P-201ENST00000476144 297 ntBASIC4.87□□□□□ -1.63
HOXA2O43364 RNU5F-2P-201ENST00000516066 82 ntBASIC4.87□□□□□ -1.63
HOXA2O43364 SNORA31.9-201ENST00000516429 84 ntBASIC4.87□□□□□ -1.63
HOXA2O43364 RNA5SP468-201ENST00000516782 93 ntBASIC4.87□□□□□ -1.63
HOXA2O43364 RNU2-56P-201ENST00000516826 190 ntBASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms