Protein–RNA interactions for Protein: A0PK11

CLRN2, Clarin-2, humanhuman

Predictions only

Length 232 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN2A0PK11 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.88□□□□□ -2.11
CLRN2A0PK11 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.88□□□□□ -2.11
CLRN2A0PK11 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
CLRN2A0PK11 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
CLRN2A0PK11 RNY1P12-201ENST00000364251 105 ntBASIC1.88□□□□□ -2.11
CLRN2A0PK11 Y_RNA.224-201ENST00000364308 111 ntBASIC1.88□□□□□ -2.11
CLRN2A0PK11 BTF3L4P2-201ENST00000392798 346 ntBASIC1.88□□□□□ -2.11
CLRN2A0PK11 AL033519.2-201ENST00000403958 392 ntBASIC1.88□□□□□ -2.11
CLRN2A0PK11 VN1R36P-201ENST00000414936 291 ntBASIC1.88□□□□□ -2.11
CLRN2A0PK11 AC074117.2-201ENST00000417130 397 ntBASIC1.88□□□□□ -2.11
CLRN2A0PK11 UBE2V1P4-201ENST00000425374 344 ntBASIC1.88□□□□□ -2.11
CLRN2A0PK11 RPS24P1-201ENST00000438550 371 ntBASIC1.88□□□□□ -2.11
CLRN2A0PK11 USP9YP12-201ENST00000450481 570 ntBASIC1.88□□□□□ -2.11
CLRN2A0PK11 PPP1R2P5-201ENST00000457256 603 ntBASIC1.88□□□□□ -2.11
CLRN2A0PK11 snoU13.14-201ENST00000459372 104 ntBASIC1.88□□□□□ -2.11
CLRN2A0PK11 MTND2P14-201ENST00000482139 351 ntBASIC1.88□□□□□ -2.11
CLRN2A0PK11 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC1.88□□□□□ -2.11
CLRN2A0PK11 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.88□□□□□ -2.11
CLRN2A0PK11 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC1.88□□□□□ -2.11
CLRN2A0PK11 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC1.88□□□□□ -2.11
CLRN2A0PK11 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC1.88□□□□□ -2.11
CLRN2A0PK11 AC011458.1-201ENST00000604034 617 ntBASIC1.88□□□□□ -2.11
CLRN2A0PK11 CYP2C61P-201ENST00000604072 290 ntBASIC1.88□□□□□ -2.11
CLRN2A0PK11 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC1.88□□□□□ -2.11
CLRN2A0PK11 RNU6-944P-201ENST00000364023 107 ntBASIC1.87□□□□□ -2.11
CLRN2A0PK11 RNU4-28P-201ENST00000364739 141 ntBASIC1.87□□□□□ -2.11
CLRN2A0PK11 SNORD48-201ENST00000364953 64 ntBASIC1.87□□□□□ -2.11
CLRN2A0PK11 RNU5E-5P-201ENST00000365379 116 ntBASIC1.87□□□□□ -2.11
CLRN2A0PK11 Y_RNA.466-201ENST00000384294 113 ntBASIC1.87□□□□□ -2.11
CLRN2A0PK11 SNORA24.1-201ENST00000384401 135 ntBASIC1.87□□□□□ -2.11
CLRN2A0PK11 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
CLRN2A0PK11 AL593851.1-201ENST00000426171 157 ntBASIC1.87□□□□□ -2.11
CLRN2A0PK11 HSPE1P21-201ENST00000438283 308 ntBASIC1.87□□□□□ -2.11
CLRN2A0PK11 MTCO2P29-201ENST00000465212 189 ntBASIC1.87□□□□□ -2.11
CLRN2A0PK11 RBBP4P6-201ENST00000508098 202 ntBASIC1.87□□□□□ -2.11
CLRN2A0PK11 SNORA43.2-201ENST00000516652 128 ntBASIC1.87□□□□□ -2.11
CLRN2A0PK11 RNU6-965P-201ENST00000516721 96 ntBASIC1.87□□□□□ -2.11
CLRN2A0PK11 MIR3122-201ENST00000577243 73 ntBASIC1.87□□□□□ -2.11
CLRN2A0PK11 HMGN1P30-201ENST00000589286 268 ntBASIC1.87□□□□□ -2.11
CLRN2A0PK11 AL022345.1-201ENST00000607292 135 ntBASIC1.87□□□□□ -2.11
CLRN2A0PK11 AC009878.1-201ENST00000621819 340 ntBASIC1.87□□□□□ -2.11
CLRN2A0PK11 AL157786.1-207ENST00000627771 695 ntBASIC1.87□□□□□ -2.11
CLRN2A0PK11 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.87□□□□□ -2.11
CLRN2A0PK11 AC245060.5-201ENST00000610778 3293 ntBASIC1.87□□□□□ -2.11
CLRN2A0PK11 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
CLRN2A0PK11 RNU6-500P-201ENST00000362349 107 ntBASIC1.86□□□□□ -2.11
CLRN2A0PK11 SNORD56.1-201ENST00000362913 68 ntBASIC1.86□□□□□ -2.11
CLRN2A0PK11 SNORA7.1-201ENST00000363750 139 ntBASIC1.86□□□□□ -2.11
CLRN2A0PK11 RNU4-13P-201ENST00000364019 141 ntBASIC1.86□□□□□ -2.11
CLRN2A0PK11 RNU6-392P-201ENST00000364926 101 ntBASIC1.86□□□□□ -2.11
CLRN2A0PK11 MIR578-201ENST00000384828 96 ntBASIC1.86□□□□□ -2.11
CLRN2A0PK11 MIR597-201ENST00000384968 97 ntBASIC1.86□□□□□ -2.11
CLRN2A0PK11 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.86□□□□□ -2.11
CLRN2A0PK11 MIR1276-201ENST00000408707 83 ntBASIC1.86□□□□□ -2.11
CLRN2A0PK11 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC1.86□□□□□ -2.11
CLRN2A0PK11 TEX41-202ENST00000414256 604 ntTSL 5 BASIC1.86□□□□□ -2.11
CLRN2A0PK11 AL356583.2-201ENST00000426536 280 ntBASIC1.86□□□□□ -2.11
CLRN2A0PK11 AL451074.3-201ENST00000437709 472 ntBASIC1.86□□□□□ -2.11
CLRN2A0PK11 MTND5P2-201ENST00000442927 1142 ntBASIC1.86□□□□□ -2.11
CLRN2A0PK11 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.86□□□□□ -2.11
CLRN2A0PK11 RNU1-92P-201ENST00000517017 135 ntBASIC1.86□□□□□ -2.11
CLRN2A0PK11 MRPS36P3-201ENST00000519284 130 ntBASIC1.86□□□□□ -2.11
CLRN2A0PK11 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.86□□□□□ -2.11
CLRN2A0PK11 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC1.86□□□□□ -2.11
CLRN2A0PK11 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC1.86□□□□□ -2.11
CLRN2A0PK11 HSBP1P1-201ENST00000555205 166 ntBASIC1.86□□□□□ -2.11
CLRN2A0PK11 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.86□□□□□ -2.11
CLRN2A0PK11 AC022254.1-201ENST00000567857 235 ntBASIC1.86□□□□□ -2.11
CLRN2A0PK11 AC008751.2-201ENST00000597885 980 ntBASIC1.86□□□□□ -2.11
CLRN2A0PK11 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC1.86□□□□□ -2.11
CLRN2A0PK11 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.86□□□□□ -2.11
CLRN2A0PK11 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC1.85□□□□□ -2.11
CLRN2A0PK11 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
CLRN2A0PK11 snoU2_19.1-201ENST00000362361 80 ntBASIC1.85□□□□□ -2.11
CLRN2A0PK11 RNU1-58P-201ENST00000362413 163 ntBASIC1.85□□□□□ -2.11
CLRN2A0PK11 RNU4-1-201ENST00000363925 141 ntBASIC1.85□□□□□ -2.11
CLRN2A0PK11 RNU6-743P-201ENST00000364151 106 ntBASIC1.85□□□□□ -2.11
CLRN2A0PK11 RPL21P90-201ENST00000415692 466 ntBASIC1.85□□□□□ -2.11
CLRN2A0PK11 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC1.85□□□□□ -2.11
CLRN2A0PK11 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC1.85□□□□□ -2.11
CLRN2A0PK11 UBE2D3P4-201ENST00000441973 436 ntBASIC1.85□□□□□ -2.11
CLRN2A0PK11 EPS15P1-201ENST00000448836 336 ntBASIC1.85□□□□□ -2.11
CLRN2A0PK11 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC1.85□□□□□ -2.11
CLRN2A0PK11 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC1.85□□□□□ -2.11
CLRN2A0PK11 RPL30P12-201ENST00000474666 353 ntBASIC1.85□□□□□ -2.11
CLRN2A0PK11 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.85□□□□□ -2.11
CLRN2A0PK11 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC1.85□□□□□ -2.11
CLRN2A0PK11 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC1.85□□□□□ -2.11
CLRN2A0PK11 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC1.85□□□□□ -2.11
CLRN2A0PK11 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC1.85□□□□□ -2.11
CLRN2A0PK11 AC018630.3-201ENST00000542637 96 ntBASIC1.85□□□□□ -2.11
CLRN2A0PK11 AC112191.3-201ENST00000604371 277 ntBASIC1.85□□□□□ -2.11
CLRN2A0PK11 MIR6504-201ENST00000613520 61 ntBASIC1.85□□□□□ -2.11
CLRN2A0PK11 AC019226.2-201ENST00000625973 424 ntBASIC1.85□□□□□ -2.11
CLRN2A0PK11 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.84□□□□□ -2.11
CLRN2A0PK11 MIR558-201ENST00000384920 94 ntBASIC1.84□□□□□ -2.11
CLRN2A0PK11 RAP1BP3-201ENST00000407180 549 ntBASIC1.84□□□□□ -2.11
CLRN2A0PK11 MTCYBP5-201ENST00000423752 1135 ntBASIC1.84□□□□□ -2.11
CLRN2A0PK11 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.84□□□□□ -2.11
CLRN2A0PK11 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC1.84□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 155 ms