Protein–RNA interactions for Protein: A0A0B4J268

TRAV4, T-cell receptor alpha variable 4 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV4A0A0B4J268 snoU13.31-201ENST00000607291 104 ntBASIC0.7□□□□□ -2.3
TRAV4A0A0B4J268 FAS-AS1.2-201ENST00000620386 170 ntBASIC0.7□□□□□ -2.3
TRAV4A0A0B4J268 AC027335.2-201ENST00000624030 375 ntBASIC0.7□□□□□ -2.3
TRAV4A0A0B4J268 SCARNA4-202ENST00000625402 129 ntBASIC0.7□□□□□ -2.3
TRAV4A0A0B4J268 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC0.7□□□□□ -2.3
TRAV4A0A0B4J268 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.7□□□□□ -2.3
TRAV4A0A0B4J268 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
TRAV4A0A0B4J268 OR4G2P-201ENST00000328113 903 ntBASIC0.69□□□□□ -2.3
TRAV4A0A0B4J268 Y_RNA.311-201ENST00000365068 96 ntBASIC0.69□□□□□ -2.3
TRAV4A0A0B4J268 SMIM11P1-201ENST00000369586 178 ntBASIC0.69□□□□□ -2.3
TRAV4A0A0B4J268 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.69□□□□□ -2.3
TRAV4A0A0B4J268 BTF3L4P1-201ENST00000413813 468 ntBASIC0.69□□□□□ -2.3
TRAV4A0A0B4J268 RPL21P90-201ENST00000415692 466 ntBASIC0.69□□□□□ -2.3
TRAV4A0A0B4J268 AC123900.1-201ENST00000420390 96 ntBASIC0.69□□□□□ -2.3
TRAV4A0A0B4J268 AC013410.2-201ENST00000422627 201 ntBASIC0.69□□□□□ -2.3
TRAV4A0A0B4J268 NDUFB1P2-201ENST00000449477 176 ntBASIC0.69□□□□□ -2.3
TRAV4A0A0B4J268 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC0.69□□□□□ -2.3
TRAV4A0A0B4J268 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC0.69□□□□□ -2.3
TRAV4A0A0B4J268 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC0.69□□□□□ -2.3
TRAV4A0A0B4J268 AC005741.1-201ENST00000511094 432 ntBASIC0.69□□□□□ -2.3
TRAV4A0A0B4J268 AC008837.2-201ENST00000513076 418 ntBASIC0.69□□□□□ -2.3
TRAV4A0A0B4J268 RNA5SP216-201ENST00000516111 123 ntBASIC0.69□□□□□ -2.3
TRAV4A0A0B4J268 RN7SKP88-201ENST00000516847 250 ntBASIC0.69□□□□□ -2.3
TRAV4A0A0B4J268 SNORD60.2-201ENST00000516883 86 ntBASIC0.69□□□□□ -2.3
TRAV4A0A0B4J268 CYCSP23-201ENST00000519781 313 ntBASIC0.69□□□□□ -2.3
TRAV4A0A0B4J268 IL7-206ENST00000520269 456 ntTSL 3 BASIC0.69□□□□□ -2.3
TRAV4A0A0B4J268 MIR4769-201ENST00000584126 77 ntBASIC0.69□□□□□ -2.3
TRAV4A0A0B4J268 AC098848.2-201ENST00000588023 330 ntBASIC0.69□□□□□ -2.3
TRAV4A0A0B4J268 AL353778.1-201ENST00000603149 408 ntBASIC0.69□□□□□ -2.3
TRAV4A0A0B4J268 AC005776.1-201ENST00000603164 290 ntBASIC0.69□□□□□ -2.3
TRAV4A0A0B4J268 MIR15A-201ENST00000607334 83 ntBASIC0.69□□□□□ -2.3
TRAV4A0A0B4J268 AL355816.2-201ENST00000610049 647 ntBASIC0.69□□□□□ -2.3
TRAV4A0A0B4J268 AC124016.2-201ENST00000610058 665 ntBASIC0.69□□□□□ -2.3
TRAV4A0A0B4J268 7SK.8-201ENST00000612110 250 ntBASIC0.69□□□□□ -2.3
TRAV4A0A0B4J268 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC0.69□□□□□ -2.3
TRAV4A0A0B4J268 7SK.11-201ENST00000615477 250 ntBASIC0.69□□□□□ -2.3
TRAV4A0A0B4J268 7SK.13-201ENST00000622040 250 ntBASIC0.69□□□□□ -2.3
TRAV4A0A0B4J268 AC010615.1-201ENST00000594254 1764 ntBASIC0.69□□□□□ -2.3
TRAV4A0A0B4J268 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC0.68□□□□□ -2.3
TRAV4A0A0B4J268 RNU6-621P-201ENST00000364752 109 ntBASIC0.68□□□□□ -2.3
TRAV4A0A0B4J268 RNU1-36P-201ENST00000365130 165 ntBASIC0.68□□□□□ -2.3
TRAV4A0A0B4J268 MIR548B-201ENST00000385247 97 ntBASIC0.68□□□□□ -2.3
TRAV4A0A0B4J268 POLR2J4-204ENST00000418424 324 ntBASIC0.68□□□□□ -2.3
TRAV4A0A0B4J268 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC0.68□□□□□ -2.3
TRAV4A0A0B4J268 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC0.68□□□□□ -2.3
TRAV4A0A0B4J268 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC0.68□□□□□ -2.3
TRAV4A0A0B4J268 AC079140.3-201ENST00000511111 550 ntBASIC0.68□□□□□ -2.3
TRAV4A0A0B4J268 RNU4ATAC11P-201ENST00000515939 126 ntBASIC0.68□□□□□ -2.3
TRAV4A0A0B4J268 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC0.68□□□□□ -2.3
TRAV4A0A0B4J268 AP003355.1-201ENST00000518956 587 ntBASIC0.68□□□□□ -2.3
TRAV4A0A0B4J268 AC069114.2-201ENST00000604699 304 ntBASIC0.68□□□□□ -2.3
TRAV4A0A0B4J268 AL020996.3-201ENST00000606617 222 ntBASIC0.68□□□□□ -2.3
TRAV4A0A0B4J268 AC024940.5-201ENST00000622889 474 ntBASIC0.68□□□□□ -2.3
TRAV4A0A0B4J268 AC091895.1-201ENST00000624494 256 ntBASIC0.68□□□□□ -2.3
TRAV4A0A0B4J268 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC0.68□□□□□ -2.3
TRAV4A0A0B4J268 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC0.68□□□□□ -2.3
TRAV4A0A0B4J268 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC0.68□□□□□ -2.3
TRAV4A0A0B4J268 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.68□□□□□ -2.3
TRAV4A0A0B4J268 MIR10A-201ENST00000385043 110 ntBASIC0.67□□□□□ -2.3
TRAV4A0A0B4J268 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.67□□□□□ -2.3
TRAV4A0A0B4J268 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC0.67□□□□□ -2.3
TRAV4A0A0B4J268 VPS26BP1-201ENST00000417155 755 ntBASIC0.67□□□□□ -2.3
TRAV4A0A0B4J268 USP9YP11-201ENST00000427537 717 ntBASIC0.67□□□□□ -2.3
TRAV4A0A0B4J268 TIMM9P1-201ENST00000436122 256 ntBASIC0.67□□□□□ -2.3
TRAV4A0A0B4J268 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC0.67□□□□□ -2.3
TRAV4A0A0B4J268 COX6CP14-201ENST00000469580 174 ntBASIC0.67□□□□□ -2.3
TRAV4A0A0B4J268 SCARNA16.2-201ENST00000516520 172 ntBASIC0.67□□□□□ -2.3
TRAV4A0A0B4J268 RNA5SP437-201ENST00000517249 129 ntBASIC0.67□□□□□ -2.3
TRAV4A0A0B4J268 AC091163.3-201ENST00000518269 1144 ntBASIC0.67□□□□□ -2.3
TRAV4A0A0B4J268 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC0.67□□□□□ -2.3
TRAV4A0A0B4J268 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC0.67□□□□□ -2.3
TRAV4A0A0B4J268 AC091135.1-201ENST00000585943 307 ntBASIC0.67□□□□□ -2.3
TRAV4A0A0B4J268 VN1R82P-201ENST00000601481 356 ntBASIC0.67□□□□□ -2.3
TRAV4A0A0B4J268 AL138889.2-201ENST00000603883 242 ntBASIC0.67□□□□□ -2.3
TRAV4A0A0B4J268 AL136363.2-201ENST00000604173 851 ntBASIC0.67□□□□□ -2.3
TRAV4A0A0B4J268 AL022154.1-201ENST00000604698 785 ntBASIC0.67□□□□□ -2.3
TRAV4A0A0B4J268 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC0.67□□□□□ -2.3
TRAV4A0A0B4J268 AC211469.2-201ENST00000605461 205 ntBASIC0.67□□□□□ -2.3
TRAV4A0A0B4J268 RNU6-87P-201ENST00000607561 108 ntBASIC0.67□□□□□ -2.3
TRAV4A0A0B4J268 AC245297.2-201ENST00000610119 565 ntBASIC0.67□□□□□ -2.3
TRAV4A0A0B4J268 AL021879.1-201ENST00000611756 288 ntBASIC0.67□□□□□ -2.3
TRAV4A0A0B4J268 AL158163.2-201ENST00000619110 700 ntBASIC0.67□□□□□ -2.3
TRAV4A0A0B4J268 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC0.67□□□□□ -2.3
TRAV4A0A0B4J268 AC092104.1-201ENST00000497346 1441 ntBASIC0.66□□□□□ -2.3
TRAV4A0A0B4J268 SNORD56.1-201ENST00000362913 68 ntBASIC0.66□□□□□ -2.3
TRAV4A0A0B4J268 RNU6-392P-201ENST00000364926 101 ntBASIC0.66□□□□□ -2.3
TRAV4A0A0B4J268 RNU6-190P-201ENST00000384154 102 ntBASIC0.66□□□□□ -2.3
TRAV4A0A0B4J268 MIR146A-201ENST00000385201 99 ntBASIC0.66□□□□□ -2.3
TRAV4A0A0B4J268 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC0.66□□□□□ -2.3
TRAV4A0A0B4J268 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC0.66□□□□□ -2.3
TRAV4A0A0B4J268 ELOCP17-201ENST00000414751 326 ntBASIC0.66□□□□□ -2.3
TRAV4A0A0B4J268 ELOCP9-201ENST00000418624 239 ntBASIC0.66□□□□□ -2.3
TRAV4A0A0B4J268 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC0.66□□□□□ -2.3
TRAV4A0A0B4J268 Z82205.1-201ENST00000428456 297 ntBASIC0.66□□□□□ -2.3
TRAV4A0A0B4J268 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC0.66□□□□□ -2.3
TRAV4A0A0B4J268 RPS27P1-201ENST00000450552 247 ntBASIC0.66□□□□□ -2.3
TRAV4A0A0B4J268 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC0.66□□□□□ -2.3
TRAV4A0A0B4J268 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC0.66□□□□□ -2.3
TRAV4A0A0B4J268 AC119751.4-201ENST00000507498 357 ntBASIC0.66□□□□□ -2.3
TRAV4A0A0B4J268 ACA64.5-201ENST00000516207 127 ntBASIC0.66□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms