Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.33□□□□□ -1.72
SYNGAP1Q96PV0 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
SYNGAP1Q96PV0 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.33□□□□□ -1.72
SYNGAP1Q96PV0 MIR411-201ENST00000362239 96 ntBASIC4.33□□□□□ -1.72
SYNGAP1Q96PV0 RNU6-1301P-201ENST00000362724 104 ntBASIC4.33□□□□□ -1.72
SYNGAP1Q96PV0 RNU4-90P-201ENST00000362773 141 ntBASIC4.33□□□□□ -1.72
SYNGAP1Q96PV0 RNU6-78P-201ENST00000362897 107 ntBASIC4.33□□□□□ -1.72
SYNGAP1Q96PV0 RNU6-290P-201ENST00000365212 101 ntBASIC4.33□□□□□ -1.72
SYNGAP1Q96PV0 Y_RNA.464-201ENST00000384282 110 ntBASIC4.33□□□□□ -1.72
SYNGAP1Q96PV0 MIR32-201ENST00000384965 70 ntBASIC4.33□□□□□ -1.72
SYNGAP1Q96PV0 AL031121.1-201ENST00000406553 254 ntBASIC4.33□□□□□ -1.72
SYNGAP1Q96PV0 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC4.33□□□□□ -1.72
SYNGAP1Q96PV0 AC244098.2-201ENST00000422068 99 ntBASIC4.33□□□□□ -1.72
SYNGAP1Q96PV0 AC009296.1-201ENST00000443146 155 ntBASIC4.33□□□□□ -1.72
SYNGAP1Q96PV0 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC4.33□□□□□ -1.72
SYNGAP1Q96PV0 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC4.33□□□□□ -1.72
SYNGAP1Q96PV0 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC4.33□□□□□ -1.72
SYNGAP1Q96PV0 RNU6-1012P-201ENST00000516606 109 ntBASIC4.33□□□□□ -1.72
SYNGAP1Q96PV0 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC4.33□□□□□ -1.72
SYNGAP1Q96PV0 AC037487.3-201ENST00000606668 112 ntBASIC4.33□□□□□ -1.72
SYNGAP1Q96PV0 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.33□□□□□ -1.72
SYNGAP1Q96PV0 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.33□□□□□ -1.72
SYNGAP1Q96PV0 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
SYNGAP1Q96PV0 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
SYNGAP1Q96PV0 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.33□□□□□ -1.72
SYNGAP1Q96PV0 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
SYNGAP1Q96PV0 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
SYNGAP1Q96PV0 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.32□□□□□ -1.72
SYNGAP1Q96PV0 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SYNGAP1Q96PV0 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC4.32□□□□□ -1.72
SYNGAP1Q96PV0 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.32□□□□□ -1.72
SYNGAP1Q96PV0 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SYNGAP1Q96PV0 AC007785.2-201ENST00000598627 1916 ntBASIC4.32□□□□□ -1.72
SYNGAP1Q96PV0 PCNPP3-201ENST00000393579 471 ntBASIC4.32□□□□□ -1.72
SYNGAP1Q96PV0 ATP5A1P2-201ENST00000412323 255 ntBASIC4.32□□□□□ -1.72
SYNGAP1Q96PV0 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC4.32□□□□□ -1.72
SYNGAP1Q96PV0 AC017079.2-201ENST00000416102 485 ntBASIC4.32□□□□□ -1.72
SYNGAP1Q96PV0 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC4.32□□□□□ -1.72
SYNGAP1Q96PV0 AL590383.1-201ENST00000428602 75 ntBASIC4.32□□□□□ -1.72
SYNGAP1Q96PV0 RN7SL601P-201ENST00000471221 293 ntBASIC4.32□□□□□ -1.72
SYNGAP1Q96PV0 S100A11P1-201ENST00000477525 312 ntBASIC4.32□□□□□ -1.72
SYNGAP1Q96PV0 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC4.32□□□□□ -1.72
SYNGAP1Q96PV0 RNU6-496P-201ENST00000516145 99 ntBASIC4.32□□□□□ -1.72
SYNGAP1Q96PV0 AC090281.1-201ENST00000523019 276 ntBASIC4.32□□□□□ -1.72
SYNGAP1Q96PV0 AC013412.1-201ENST00000610687 192 ntBASIC4.32□□□□□ -1.72
SYNGAP1Q96PV0 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC4.32□□□□□ -1.72
SYNGAP1Q96PV0 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SYNGAP1Q96PV0 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SYNGAP1Q96PV0 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.32□□□□□ -1.72
SYNGAP1Q96PV0 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
SYNGAP1Q96PV0 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
SYNGAP1Q96PV0 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SYNGAP1Q96PV0 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.32□□□□□ -1.72
SYNGAP1Q96PV0 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC4.31□□□□□ -1.72
SYNGAP1Q96PV0 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC4.31□□□□□ -1.72
SYNGAP1Q96PV0 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC4.31□□□□□ -1.72
SYNGAP1Q96PV0 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
SYNGAP1Q96PV0 LINC02471-203ENST00000641941 4752 ntBASIC4.31□□□□□ -1.72
SYNGAP1Q96PV0 Y_RNA.44-201ENST00000362676 108 ntBASIC4.31□□□□□ -1.72
SYNGAP1Q96PV0 Y_RNA.76-201ENST00000362931 109 ntBASIC4.31□□□□□ -1.72
SYNGAP1Q96PV0 RNA5SP51-201ENST00000364750 119 ntBASIC4.31□□□□□ -1.72
SYNGAP1Q96PV0 RNU6-1181P-201ENST00000384191 106 ntBASIC4.31□□□□□ -1.72
SYNGAP1Q96PV0 MIR1290-201ENST00000408735 78 ntBASIC4.31□□□□□ -1.72
SYNGAP1Q96PV0 AC016700.2-201ENST00000446011 156 ntBASIC4.31□□□□□ -1.72
SYNGAP1Q96PV0 RNU6-1278P-201ENST00000516130 107 ntBASIC4.31□□□□□ -1.72
SYNGAP1Q96PV0 AC022695.1-201ENST00000522089 237 ntBASIC4.31□□□□□ -1.72
SYNGAP1Q96PV0 AL360157.1-201ENST00000565962 87 ntBASIC4.31□□□□□ -1.72
SYNGAP1Q96PV0 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC4.31□□□□□ -1.72
SYNGAP1Q96PV0 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC4.31□□□□□ -1.72
SYNGAP1Q96PV0 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
SYNGAP1Q96PV0 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
SYNGAP1Q96PV0 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
SYNGAP1Q96PV0 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
SYNGAP1Q96PV0 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
SYNGAP1Q96PV0 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.3□□□□□ -1.72
SYNGAP1Q96PV0 RNA5SP502-201ENST00000362694 119 ntBASIC4.3□□□□□ -1.72
SYNGAP1Q96PV0 RNU6-741P-201ENST00000383889 107 ntBASIC4.3□□□□□ -1.72
SYNGAP1Q96PV0 Y_RNA.506-201ENST00000384494 102 ntBASIC4.3□□□□□ -1.72
SYNGAP1Q96PV0 RNU6-541P-201ENST00000384709 110 ntBASIC4.3□□□□□ -1.72
SYNGAP1Q96PV0 RNU4-30P-201ENST00000410245 143 ntBASIC4.3□□□□□ -1.72
SYNGAP1Q96PV0 AL358453.1-201ENST00000422522 250 ntBASIC4.3□□□□□ -1.72
SYNGAP1Q96PV0 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC4.3□□□□□ -1.72
SYNGAP1Q96PV0 snoU13.4-201ENST00000458916 104 ntBASIC4.3□□□□□ -1.72
SYNGAP1Q96PV0 SNRPGP7-201ENST00000469016 106 ntBASIC4.3□□□□□ -1.72
SYNGAP1Q96PV0 AKIRIN2P1-201ENST00000505898 352 ntBASIC4.3□□□□□ -1.72
SYNGAP1Q96PV0 SEPT14P8-201ENST00000508026 178 ntBASIC4.3□□□□□ -1.72
SYNGAP1Q96PV0 Y_RNA.679-201ENST00000516416 91 ntBASIC4.3□□□□□ -1.72
SYNGAP1Q96PV0 RNU6-861P-201ENST00000516745 106 ntBASIC4.3□□□□□ -1.72
SYNGAP1Q96PV0 UBE2Q2P8-201ENST00000560644 102 ntBASIC4.3□□□□□ -1.72
SYNGAP1Q96PV0 MIR4782-201ENST00000577987 79 ntBASIC4.3□□□□□ -1.72
SYNGAP1Q96PV0 MIR3922-201ENST00000585192 84 ntBASIC4.3□□□□□ -1.72
SYNGAP1Q96PV0 AC010928.2-201ENST00000588017 287 ntBASIC4.3□□□□□ -1.72
SYNGAP1Q96PV0 AC244505.7-201ENST00000599675 272 ntBASIC4.3□□□□□ -1.72
SYNGAP1Q96PV0 SNRPGP15-201ENST00000600149 222 ntBASIC4.3□□□□□ -1.72
SYNGAP1Q96PV0 AC099506.2-201ENST00000623074 221 ntBASIC4.3□□□□□ -1.72
SYNGAP1Q96PV0 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC4.3□□□□□ -1.72
SYNGAP1Q96PV0 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
SYNGAP1Q96PV0 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
SYNGAP1Q96PV0 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
SYNGAP1Q96PV0 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms