Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC4.5□□□□□ -1.69
CCDC116Q8IYX3 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
CCDC116Q8IYX3 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
CCDC116Q8IYX3 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.5□□□□□ -1.69
CCDC116Q8IYX3 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
CCDC116Q8IYX3 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
CCDC116Q8IYX3 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CCDC116Q8IYX3 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.49□□□□□ -1.69
CCDC116Q8IYX3 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CCDC116Q8IYX3 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.49□□□□□ -1.69
CCDC116Q8IYX3 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
CCDC116Q8IYX3 U3.9-201ENST00000363823 204 ntBASIC4.49□□□□□ -1.69
CCDC116Q8IYX3 MIR585-201ENST00000384887 94 ntBASIC4.49□□□□□ -1.69
CCDC116Q8IYX3 AL592291.1-201ENST00000403830 352 ntBASIC4.49□□□□□ -1.69
CCDC116Q8IYX3 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.49□□□□□ -1.69
CCDC116Q8IYX3 AL645608.4-201ENST00000423619 154 ntBASIC4.49□□□□□ -1.69
CCDC116Q8IYX3 HMGN2P10-201ENST00000448085 265 ntBASIC4.49□□□□□ -1.69
CCDC116Q8IYX3 DCLRE1CP1-201ENST00000454630 470 ntBASIC4.49□□□□□ -1.69
CCDC116Q8IYX3 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC4.49□□□□□ -1.69
CCDC116Q8IYX3 SCARNA10-201ENST00000459255 330 ntBASIC4.49□□□□□ -1.69
CCDC116Q8IYX3 AIG1P1-201ENST00000503376 148 ntBASIC4.49□□□□□ -1.69
CCDC116Q8IYX3 RNA5SP464-201ENST00000516251 108 ntBASIC4.49□□□□□ -1.69
CCDC116Q8IYX3 AC090142.3-201ENST00000519012 385 ntBASIC4.49□□□□□ -1.69
CCDC116Q8IYX3 MIR3923-201ENST00000579521 83 ntBASIC4.49□□□□□ -1.69
CCDC116Q8IYX3 MIR8069-1-201ENST00000616627 86 ntBASIC4.49□□□□□ -1.69
CCDC116Q8IYX3 MIR8069-2-201ENST00000621412 86 ntBASIC4.49□□□□□ -1.69
CCDC116Q8IYX3 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.49□□□□□ -1.69
CCDC116Q8IYX3 AC068205.3-201ENST00000636385 468 ntBASIC4.49□□□□□ -1.69
CCDC116Q8IYX3 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CCDC116Q8IYX3 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
CCDC116Q8IYX3 AL136164.3-201ENST00000624429 3978 ntBASIC4.48□□□□□ -1.69
CCDC116Q8IYX3 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.48□□□□□ -1.69
CCDC116Q8IYX3 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.48□□□□□ -1.69
CCDC116Q8IYX3 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.48□□□□□ -1.69
CCDC116Q8IYX3 RNU6-1082P-201ENST00000364574 107 ntBASIC4.48□□□□□ -1.69
CCDC116Q8IYX3 RNU6-144P-201ENST00000383951 107 ntBASIC4.48□□□□□ -1.69
CCDC116Q8IYX3 Y_RNA.584-201ENST00000391090 114 ntBASIC4.48□□□□□ -1.69
CCDC116Q8IYX3 PPIAP31-201ENST00000405422 495 ntBASIC4.48□□□□□ -1.69
CCDC116Q8IYX3 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CCDC116Q8IYX3 MIR1271-201ENST00000408537 86 ntBASIC4.48□□□□□ -1.69
CCDC116Q8IYX3 RNU4-43P-201ENST00000410628 137 ntBASIC4.48□□□□□ -1.69
CCDC116Q8IYX3 RPL37P18-201ENST00000411602 243 ntBASIC4.48□□□□□ -1.69
CCDC116Q8IYX3 AC004866.1-201ENST00000411748 78 ntBASIC4.48□□□□□ -1.69
CCDC116Q8IYX3 COX6B1P1-201ENST00000415962 213 ntBASIC4.48□□□□□ -1.69
CCDC116Q8IYX3 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.48□□□□□ -1.69
CCDC116Q8IYX3 AC108022.1-201ENST00000493466 478 ntBASIC4.48□□□□□ -1.69
CCDC116Q8IYX3 SNORD33.1-201ENST00000516213 88 ntBASIC4.48□□□□□ -1.69
CCDC116Q8IYX3 RNU6-344P-201ENST00000516635 111 ntBASIC4.48□□□□□ -1.69
CCDC116Q8IYX3 ACA59.2-201ENST00000517061 156 ntBASIC4.48□□□□□ -1.69
CCDC116Q8IYX3 RNU6-844P-201ENST00000517175 102 ntBASIC4.48□□□□□ -1.69
CCDC116Q8IYX3 POC1B-211ENST00000549504 581 ntTSL 5 BASIC4.48□□□□□ -1.69
CCDC116Q8IYX3 MIR3121-201ENST00000579680 77 ntBASIC4.48□□□□□ -1.69
CCDC116Q8IYX3 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.48□□□□□ -1.69
CCDC116Q8IYX3 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CCDC116Q8IYX3 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CCDC116Q8IYX3 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CCDC116Q8IYX3 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
CCDC116Q8IYX3 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CCDC116Q8IYX3 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CCDC116Q8IYX3 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.47□□□□□ -1.69
CCDC116Q8IYX3 AC087190.4-201ENST00000574616 8334 ntBASIC4.47□□□□□ -1.69
CCDC116Q8IYX3 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC4.47□□□□□ -1.69
CCDC116Q8IYX3 RNA5SP191-201ENST00000362585 102 ntBASIC4.47□□□□□ -1.69
CCDC116Q8IYX3 RNU1-94P-201ENST00000362627 173 ntBASIC4.47□□□□□ -1.69
CCDC116Q8IYX3 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CCDC116Q8IYX3 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC4.47□□□□□ -1.69
CCDC116Q8IYX3 RNU1-82P-201ENST00000390851 165 ntBASIC4.47□□□□□ -1.69
CCDC116Q8IYX3 SNORA48.5-201ENST00000391143 135 ntBASIC4.47□□□□□ -1.69
CCDC116Q8IYX3 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC4.47□□□□□ -1.69
CCDC116Q8IYX3 AL645733.1-201ENST00000402250 217 ntBASIC4.47□□□□□ -1.69
CCDC116Q8IYX3 AL591034.1-201ENST00000407447 340 ntBASIC4.47□□□□□ -1.69
CCDC116Q8IYX3 RNU6-383P-201ENST00000410864 94 ntBASIC4.47□□□□□ -1.69
CCDC116Q8IYX3 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC4.47□□□□□ -1.69
CCDC116Q8IYX3 TOMM22P2-201ENST00000430735 237 ntBASIC4.47□□□□□ -1.69
CCDC116Q8IYX3 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.47□□□□□ -1.69
CCDC116Q8IYX3 RPS29P20-201ENST00000489592 171 ntBASIC4.47□□□□□ -1.69
CCDC116Q8IYX3 AC091868.1-201ENST00000508746 304 ntBASIC4.47□□□□□ -1.69
CCDC116Q8IYX3 RNU5F-2P-201ENST00000516066 82 ntBASIC4.47□□□□□ -1.69
CCDC116Q8IYX3 RNA5SP154-201ENST00000516193 111 ntBASIC4.47□□□□□ -1.69
CCDC116Q8IYX3 Y_RNA.694-201ENST00000516677 117 ntBASIC4.47□□□□□ -1.69
CCDC116Q8IYX3 RNU1-117P-201ENST00000517041 158 ntBASIC4.47□□□□□ -1.69
CCDC116Q8IYX3 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC4.47□□□□□ -1.69
CCDC116Q8IYX3 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.47□□□□□ -1.69
CCDC116Q8IYX3 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CCDC116Q8IYX3 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
CCDC116Q8IYX3 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
CCDC116Q8IYX3 A2MP1-204ENST00000566278 4130 ntBASIC4.47□□□□□ -1.69
CCDC116Q8IYX3 MAPK10-303ENST00000641324 3959 ntBASIC4.46□□□□□ -1.69
CCDC116Q8IYX3 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.46□□□□□ -1.69
CCDC116Q8IYX3 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.69
CCDC116Q8IYX3 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.46□□□□□ -1.69
CCDC116Q8IYX3 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
CCDC116Q8IYX3 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.69
CCDC116Q8IYX3 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.46□□□□□ -1.69
CCDC116Q8IYX3 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.46□□□□□ -1.7
CCDC116Q8IYX3 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.46□□□□□ -1.7
CCDC116Q8IYX3 DPY19L2P2-203ENST00000435536 1858 ntBASIC4.46□□□□□ -1.7
CCDC116Q8IYX3 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.46□□□□□ -1.7
CCDC116Q8IYX3 AC068538.1-201ENST00000376856 336 ntBASIC4.46□□□□□ -1.7
CCDC116Q8IYX3 AL512604.1-201ENST00000404812 257 ntBASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 110 ms