Protein–RNA interactions for Protein: Q7Z4I7

LIMS2, LIM and senescent cell antigen-like-containing domain protein 2, humanhuman

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2Q7Z4I7 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.66□□□□□ -1.82
LIMS2Q7Z4I7 Y_RNA.76-201ENST00000362931 109 ntBASIC3.66□□□□□ -1.82
LIMS2Q7Z4I7 Y_RNA.143-201ENST00000363520 106 ntBASIC3.66□□□□□ -1.82
LIMS2Q7Z4I7 U3.6-201ENST00000363622 211 ntBASIC3.66□□□□□ -1.82
LIMS2Q7Z4I7 RNA5SP50-201ENST00000363731 107 ntBASIC3.66□□□□□ -1.82
LIMS2Q7Z4I7 RNU6-827P-201ENST00000365553 106 ntBASIC3.66□□□□□ -1.82
LIMS2Q7Z4I7 RNU6-395P-201ENST00000365662 106 ntBASIC3.66□□□□□ -1.82
LIMS2Q7Z4I7 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
LIMS2Q7Z4I7 SNORA70E-201ENST00000384492 135 ntBASIC3.66□□□□□ -1.82
LIMS2Q7Z4I7 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
LIMS2Q7Z4I7 SNORA12.2-201ENST00000391040 156 ntBASIC3.66□□□□□ -1.82
LIMS2Q7Z4I7 AL513331.1-201ENST00000411908 397 ntBASIC3.66□□□□□ -1.82
LIMS2Q7Z4I7 EIF1P2-201ENST00000428233 350 ntBASIC3.66□□□□□ -1.82
LIMS2Q7Z4I7 AL357552.1-201ENST00000445254 415 ntBASIC3.66□□□□□ -1.82
LIMS2Q7Z4I7 RPS29P31-201ENST00000446147 164 ntBASIC3.66□□□□□ -1.82
LIMS2Q7Z4I7 RPS29P27-201ENST00000463711 170 ntBASIC3.66□□□□□ -1.82
LIMS2Q7Z4I7 SNRPGP3-201ENST00000469405 227 ntBASIC3.66□□□□□ -1.82
LIMS2Q7Z4I7 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.66□□□□□ -1.82
LIMS2Q7Z4I7 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.66□□□□□ -1.82
LIMS2Q7Z4I7 GMPSP1-201ENST00000514075 579 ntBASIC3.66□□□□□ -1.82
LIMS2Q7Z4I7 MIR2355-201ENST00000517199 87 ntBASIC3.66□□□□□ -1.82
LIMS2Q7Z4I7 IGHVII-53-1-201ENST00000519538 255 ntBASIC3.66□□□□□ -1.82
LIMS2Q7Z4I7 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.66□□□□□ -1.82
LIMS2Q7Z4I7 AP002392.1-201ENST00000537692 208 ntBASIC3.66□□□□□ -1.82
LIMS2Q7Z4I7 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC3.66□□□□□ -1.82
LIMS2Q7Z4I7 AL139811.1-201ENST00000424779 2299 ntBASIC3.66□□□□□ -1.82
LIMS2Q7Z4I7 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.66□□□□□ -1.82
LIMS2Q7Z4I7 AC007785.2-201ENST00000598627 1916 ntBASIC3.66□□□□□ -1.82
LIMS2Q7Z4I7 AP001148.1-201ENST00000624124 2359 ntBASIC3.66□□□□□ -1.82
LIMS2Q7Z4I7 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC3.65□□□□□ -1.82
LIMS2Q7Z4I7 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
LIMS2Q7Z4I7 Y_RNA.33-201ENST00000362591 102 ntBASIC3.65□□□□□ -1.83
LIMS2Q7Z4I7 RNU5A-1-201ENST00000362698 116 ntBASIC3.65□□□□□ -1.83
LIMS2Q7Z4I7 RNA5SP235-201ENST00000365411 114 ntBASIC3.65□□□□□ -1.83
LIMS2Q7Z4I7 Y_RNA.358-201ENST00000365491 99 ntBASIC3.65□□□□□ -1.83
LIMS2Q7Z4I7 MIR34B-201ENST00000385076 84 ntBASIC3.65□□□□□ -1.83
LIMS2Q7Z4I7 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.65□□□□□ -1.83
LIMS2Q7Z4I7 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.65□□□□□ -1.83
LIMS2Q7Z4I7 CYCSP35-201ENST00000451978 304 ntBASIC3.65□□□□□ -1.83
LIMS2Q7Z4I7 AC091153.1-201ENST00000466297 402 ntBASIC3.65□□□□□ -1.83
LIMS2Q7Z4I7 RPL23AP45-201ENST00000476406 468 ntBASIC3.65□□□□□ -1.83
LIMS2Q7Z4I7 SERF1AP1-201ENST00000514575 187 ntBASIC3.65□□□□□ -1.83
LIMS2Q7Z4I7 RNU6-496P-201ENST00000516145 99 ntBASIC3.65□□□□□ -1.83
LIMS2Q7Z4I7 RNU6-1012P-201ENST00000516606 109 ntBASIC3.65□□□□□ -1.83
LIMS2Q7Z4I7 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.65□□□□□ -1.83
LIMS2Q7Z4I7 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
LIMS2Q7Z4I7 AC084851.1-201ENST00000529105 249 ntBASIC3.65□□□□□ -1.83
LIMS2Q7Z4I7 MRPS36P4-201ENST00000534436 298 ntBASIC3.65□□□□□ -1.83
LIMS2Q7Z4I7 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC3.65□□□□□ -1.83
LIMS2Q7Z4I7 MZT1P2-201ENST00000604387 248 ntBASIC3.65□□□□□ -1.83
LIMS2Q7Z4I7 AC012314.7-201ENST00000619693 93 ntBASIC3.65□□□□□ -1.83
LIMS2Q7Z4I7 AL360181.4-201ENST00000621752 134 ntBASIC3.65□□□□□ -1.83
LIMS2Q7Z4I7 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC3.65□□□□□ -1.83
LIMS2Q7Z4I7 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.65□□□□□ -1.83
LIMS2Q7Z4I7 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
LIMS2Q7Z4I7 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.83
LIMS2Q7Z4I7 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.65□□□□□ -1.83
LIMS2Q7Z4I7 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.65□□□□□ -1.83
LIMS2Q7Z4I7 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.83
LIMS2Q7Z4I7 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.65□□□□□ -1.83
LIMS2Q7Z4I7 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.64□□□□□ -1.83
LIMS2Q7Z4I7 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC3.64□□□□□ -1.83
LIMS2Q7Z4I7 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
LIMS2Q7Z4I7 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC3.64□□□□□ -1.83
LIMS2Q7Z4I7 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.64□□□□□ -1.83
LIMS2Q7Z4I7 AC006504.1-201ENST00000562493 3666 ntBASIC3.64□□□□□ -1.83
LIMS2Q7Z4I7 AL359854.1-201ENST00000614203 1594 ntBASIC3.64□□□□□ -1.83
LIMS2Q7Z4I7 AC116096.1-201ENST00000566804 2314 ntBASIC3.64□□□□□ -1.83
LIMS2Q7Z4I7 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
LIMS2Q7Z4I7 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.64□□□□□ -1.83
LIMS2Q7Z4I7 RNU6-512P-201ENST00000364438 103 ntBASIC3.64□□□□□ -1.83
LIMS2Q7Z4I7 RNA5SP267-201ENST00000364893 126 ntBASIC3.64□□□□□ -1.83
LIMS2Q7Z4I7 RNY1P5-201ENST00000383890 115 ntBASIC3.64□□□□□ -1.83
LIMS2Q7Z4I7 AL079342.1-201ENST00000401460 267 ntBASIC3.64□□□□□ -1.83
LIMS2Q7Z4I7 COX6CP10-201ENST00000416832 224 ntBASIC3.64□□□□□ -1.83
LIMS2Q7Z4I7 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC3.64□□□□□ -1.83
LIMS2Q7Z4I7 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.64□□□□□ -1.83
LIMS2Q7Z4I7 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.64□□□□□ -1.83
LIMS2Q7Z4I7 snoU13.22-201ENST00000459428 104 ntBASIC3.64□□□□□ -1.83
LIMS2Q7Z4I7 COX6CP14-201ENST00000469580 174 ntBASIC3.64□□□□□ -1.83
LIMS2Q7Z4I7 AC021205.2-201ENST00000480069 347 ntBASIC3.64□□□□□ -1.83
LIMS2Q7Z4I7 AKIRIN2P1-201ENST00000505898 352 ntBASIC3.64□□□□□ -1.83
LIMS2Q7Z4I7 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC3.64□□□□□ -1.83
LIMS2Q7Z4I7 Vault.1-201ENST00000516474 102 ntBASIC3.64□□□□□ -1.83
LIMS2Q7Z4I7 SCARNA24.2-201ENST00000516968 130 ntBASIC3.64□□□□□ -1.83
LIMS2Q7Z4I7 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
LIMS2Q7Z4I7 AC087441.2-201ENST00000529141 262 ntBASIC3.64□□□□□ -1.83
LIMS2Q7Z4I7 AC005476.1-201ENST00000554427 397 ntBASIC3.64□□□□□ -1.83
LIMS2Q7Z4I7 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.64□□□□□ -1.83
LIMS2Q7Z4I7 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.64□□□□□ -1.83
LIMS2Q7Z4I7 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.64□□□□□ -1.83
LIMS2Q7Z4I7 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC3.64□□□□□ -1.83
LIMS2Q7Z4I7 Y_RNA.772-201ENST00000606692 102 ntBASIC3.64□□□□□ -1.83
LIMS2Q7Z4I7 AC107294.1-201ENST00000609524 467 ntBASIC3.64□□□□□ -1.83
LIMS2Q7Z4I7 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC3.64□□□□□ -1.83
LIMS2Q7Z4I7 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
LIMS2Q7Z4I7 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC3.64□□□□□ -1.83
LIMS2Q7Z4I7 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
LIMS2Q7Z4I7 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
LIMS2Q7Z4I7 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 143.6 ms