Protein–RNA interactions for Protein: Q5VTA0

PRAMEF17, PRAME family member 17, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF17Q5VTA0 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.12□□□□□ -1.91
PRAMEF17Q5VTA0 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC3.12□□□□□ -1.91
PRAMEF17Q5VTA0 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
PRAMEF17Q5VTA0 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
PRAMEF17Q5VTA0 RNU6-428P-201ENST00000362942 107 ntBASIC3.12□□□□□ -1.91
PRAMEF17Q5VTA0 RNU6-238P-201ENST00000363313 106 ntBASIC3.12□□□□□ -1.91
PRAMEF17Q5VTA0 RNU6-702P-201ENST00000364982 107 ntBASIC3.12□□□□□ -1.91
PRAMEF17Q5VTA0 Y_RNA.512-201ENST00000384518 102 ntBASIC3.12□□□□□ -1.91
PRAMEF17Q5VTA0 MIR325-201ENST00000385260 98 ntBASIC3.12□□□□□ -1.91
PRAMEF17Q5VTA0 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
PRAMEF17Q5VTA0 AL356968.1-201ENST00000416622 474 ntBASIC3.12□□□□□ -1.91
PRAMEF17Q5VTA0 AC092047.1-201ENST00000424997 240 ntBASIC3.12□□□□□ -1.91
PRAMEF17Q5VTA0 AC007560.1-201ENST00000426912 237 ntBASIC3.12□□□□□ -1.91
PRAMEF17Q5VTA0 AL590383.1-201ENST00000428602 75 ntBASIC3.12□□□□□ -1.91
PRAMEF17Q5VTA0 RPS15AP10-201ENST00000432472 382 ntBASIC3.12□□□□□ -1.91
PRAMEF17Q5VTA0 SNRPEP9-201ENST00000436794 238 ntBASIC3.12□□□□□ -1.91
PRAMEF17Q5VTA0 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC3.12□□□□□ -1.91
PRAMEF17Q5VTA0 MIR2276-201ENST00000516886 89 ntBASIC3.12□□□□□ -1.91
PRAMEF17Q5VTA0 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC3.12□□□□□ -1.91
PRAMEF17Q5VTA0 AC022616.4-201ENST00000522985 181 ntBASIC3.12□□□□□ -1.91
PRAMEF17Q5VTA0 HSBP1P1-201ENST00000555205 166 ntBASIC3.12□□□□□ -1.91
PRAMEF17Q5VTA0 MIR5696-201ENST00000578474 85 ntBASIC3.12□□□□□ -1.91
PRAMEF17Q5VTA0 MIR5701-3-201ENST00000578890 82 ntBASIC3.12□□□□□ -1.91
PRAMEF17Q5VTA0 MIR5701-1-201ENST00000585138 82 ntBASIC3.12□□□□□ -1.91
PRAMEF17Q5VTA0 AL021879.1-201ENST00000611756 288 ntBASIC3.12□□□□□ -1.91
PRAMEF17Q5VTA0 MIR5701-2-201ENST00000615634 82 ntBASIC3.12□□□□□ -1.91
PRAMEF17Q5VTA0 ZNF72P-201ENST00000425869 1908 ntBASIC3.12□□□□□ -1.91
PRAMEF17Q5VTA0 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
PRAMEF17Q5VTA0 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
PRAMEF17Q5VTA0 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.12□□□□□ -1.91
PRAMEF17Q5VTA0 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.12□□□□□ -1.91
PRAMEF17Q5VTA0 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
PRAMEF17Q5VTA0 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
PRAMEF17Q5VTA0 AL672296.1-201ENST00000427780 2158 ntBASIC3.11□□□□□ -1.91
PRAMEF17Q5VTA0 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
PRAMEF17Q5VTA0 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.11□□□□□ -1.91
PRAMEF17Q5VTA0 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
PRAMEF17Q5VTA0 AP002088.1-201ENST00000382740 395 ntBASIC3.11□□□□□ -1.91
PRAMEF17Q5VTA0 MIR521-1-201ENST00000384902 87 ntBASIC3.11□□□□□ -1.91
PRAMEF17Q5VTA0 MIR493-201ENST00000385254 89 ntBASIC3.11□□□□□ -1.91
PRAMEF17Q5VTA0 MT-TG-201ENST00000387429 68 ntBASIC3.11□□□□□ -1.91
PRAMEF17Q5VTA0 SNORA48.5-201ENST00000391143 135 ntBASIC3.11□□□□□ -1.91
PRAMEF17Q5VTA0 AC098614.2-201ENST00000426040 255 ntBASIC3.11□□□□□ -1.91
PRAMEF17Q5VTA0 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC3.11□□□□□ -1.91
PRAMEF17Q5VTA0 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC3.11□□□□□ -1.91
PRAMEF17Q5VTA0 AC006028.1-201ENST00000438379 402 ntBASIC3.11□□□□□ -1.91
PRAMEF17Q5VTA0 RPL21P2-201ENST00000440049 481 ntBASIC3.11□□□□□ -1.91
PRAMEF17Q5VTA0 AL078601.1-201ENST00000444542 271 ntBASIC3.11□□□□□ -1.91
PRAMEF17Q5VTA0 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.11□□□□□ -1.91
PRAMEF17Q5VTA0 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
PRAMEF17Q5VTA0 RPS29P27-201ENST00000463711 170 ntBASIC3.11□□□□□ -1.91
PRAMEF17Q5VTA0 AP002884.2-201ENST00000471647 395 ntBASIC3.11□□□□□ -1.91
PRAMEF17Q5VTA0 AC114801.2-201ENST00000503825 781 ntBASIC3.11□□□□□ -1.91
PRAMEF17Q5VTA0 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.11□□□□□ -1.91
PRAMEF17Q5VTA0 RNU1-103P-201ENST00000516502 125 ntBASIC3.11□□□□□ -1.91
PRAMEF17Q5VTA0 SNORA40.14-201ENST00000516543 86 ntBASIC3.11□□□□□ -1.91
PRAMEF17Q5VTA0 AP005902.1-201ENST00000521358 186 ntBASIC3.11□□□□□ -1.91
PRAMEF17Q5VTA0 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC3.11□□□□□ -1.91
PRAMEF17Q5VTA0 HIGD1AP1-201ENST00000550979 275 ntBASIC3.11□□□□□ -1.91
PRAMEF17Q5VTA0 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.11□□□□□ -1.91
PRAMEF17Q5VTA0 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.11□□□□□ -1.91
PRAMEF17Q5VTA0 MIR4298-201ENST00000584380 73 ntBASIC3.11□□□□□ -1.91
PRAMEF17Q5VTA0 AL355297.3-201ENST00000604082 446 ntBASIC3.11□□□□□ -1.91
PRAMEF17Q5VTA0 AL355598.1-201ENST00000604169 202 ntBASIC3.11□□□□□ -1.91
PRAMEF17Q5VTA0 AC124312.5-201ENST00000604451 268 ntBASIC3.11□□□□□ -1.91
PRAMEF17Q5VTA0 AC005046.1-201ENST00000608515 625 ntBASIC3.11□□□□□ -1.91
PRAMEF17Q5VTA0 MIR8076-201ENST00000611401 83 ntBASIC3.11□□□□□ -1.91
PRAMEF17Q5VTA0 HMGB1P24-202ENST00000615653 685 ntBASIC3.11□□□□□ -1.91
PRAMEF17Q5VTA0 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.11□□□□□ -1.91
PRAMEF17Q5VTA0 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC3.11□□□□□ -1.91
PRAMEF17Q5VTA0 AC099506.2-201ENST00000623074 221 ntBASIC3.11□□□□□ -1.91
PRAMEF17Q5VTA0 AC090617.7-201ENST00000623952 126 ntBASIC3.11□□□□□ -1.91
PRAMEF17Q5VTA0 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
PRAMEF17Q5VTA0 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.11□□□□□ -1.91
PRAMEF17Q5VTA0 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.11□□□□□ -1.91
PRAMEF17Q5VTA0 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
PRAMEF17Q5VTA0 SNORD50.1-201ENST00000362987 71 ntBASIC3.1□□□□□ -1.91
PRAMEF17Q5VTA0 U3.6-201ENST00000363622 211 ntBASIC3.1□□□□□ -1.91
PRAMEF17Q5VTA0 Y_RNA.380-201ENST00000365663 111 ntBASIC3.1□□□□□ -1.91
PRAMEF17Q5VTA0 Y_RNA.424-201ENST00000384063 103 ntBASIC3.1□□□□□ -1.91
PRAMEF17Q5VTA0 MIR1252-201ENST00000408861 65 ntBASIC3.1□□□□□ -1.91
PRAMEF17Q5VTA0 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.1□□□□□ -1.91
PRAMEF17Q5VTA0 EIF4EP2-201ENST00000422816 654 ntBASIC3.1□□□□□ -1.91
PRAMEF17Q5VTA0 CBX3P6-201ENST00000430257 527 ntBASIC3.1□□□□□ -1.91
PRAMEF17Q5VTA0 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC3.1□□□□□ -1.91
PRAMEF17Q5VTA0 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC3.1□□□□□ -1.91
PRAMEF17Q5VTA0 HMGB3P8-201ENST00000449709 577 ntBASIC3.1□□□□□ -1.91
PRAMEF17Q5VTA0 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC3.1□□□□□ -1.91
PRAMEF17Q5VTA0 snoU109.2-201ENST00000459316 135 ntBASIC3.1□□□□□ -1.91
PRAMEF17Q5VTA0 AC010401.1-201ENST00000463867 348 ntBASIC3.1□□□□□ -1.91
PRAMEF17Q5VTA0 RN7SL283P-201ENST00000489055 303 ntBASIC3.1□□□□□ -1.91
PRAMEF17Q5VTA0 RPL22P13-201ENST00000493291 347 ntBASIC3.1□□□□□ -1.91
PRAMEF17Q5VTA0 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.1□□□□□ -1.91
PRAMEF17Q5VTA0 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC3.1□□□□□ -1.91
PRAMEF17Q5VTA0 AC131281.1-201ENST00000522984 164 ntBASIC3.1□□□□□ -1.91
PRAMEF17Q5VTA0 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.1□□□□□ -1.91
PRAMEF17Q5VTA0 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.1□□□□□ -1.91
PRAMEF17Q5VTA0 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC3.1□□□□□ -1.91
PRAMEF17Q5VTA0 Z98751.3-201ENST00000604447 521 ntBASIC3.1□□□□□ -1.91
PRAMEF17Q5VTA0 AC090425.1-201ENST00000610007 140 ntBASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 129.4 ms