Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 AC092798.1-201ENST00000458542 409 ntBASIC4.15□□□□□ -1.75
RSPO4Q2I0M5 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC4.15□□□□□ -1.75
RSPO4Q2I0M5 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC4.15□□□□□ -1.75
RSPO4Q2I0M5 AC090142.3-201ENST00000519012 385 ntBASIC4.15□□□□□ -1.75
RSPO4Q2I0M5 AC136628.3-201ENST00000521868 290 ntBASIC4.15□□□□□ -1.75
RSPO4Q2I0M5 IGKV2D-19-201ENST00000523346 262 ntBASIC4.15□□□□□ -1.75
RSPO4Q2I0M5 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC4.15□□□□□ -1.75
RSPO4Q2I0M5 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC4.15□□□□□ -1.75
RSPO4Q2I0M5 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
RSPO4Q2I0M5 MIR6852-201ENST00000621699 66 ntBASIC4.15□□□□□ -1.75
RSPO4Q2I0M5 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.75
RSPO4Q2I0M5 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
RSPO4Q2I0M5 AC093591.2-201ENST00000565254 3843 ntBASIC4.15□□□□□ -1.75
RSPO4Q2I0M5 AC010266.2-201ENST00000564741 3255 ntBASIC4.15□□□□□ -1.75
RSPO4Q2I0M5 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
RSPO4Q2I0M5 AC018529.3-201ENST00000624212 2254 ntBASIC4.14□□□□□ -1.75
RSPO4Q2I0M5 AC126323.6-202ENST00000568092 3511 ntBASIC4.14□□□□□ -1.75
RSPO4Q2I0M5 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC4.14□□□□□ -1.75
RSPO4Q2I0M5 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
RSPO4Q2I0M5 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
RSPO4Q2I0M5 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
RSPO4Q2I0M5 RNU6-1082P-201ENST00000364574 107 ntBASIC4.14□□□□□ -1.75
RSPO4Q2I0M5 CRP-203ENST00000368111 512 ntTSL 3 BASIC4.14□□□□□ -1.75
RSPO4Q2I0M5 RNU6-969P-201ENST00000383900 105 ntBASIC4.14□□□□□ -1.75
RSPO4Q2I0M5 Y_RNA.498-201ENST00000384460 102 ntBASIC4.14□□□□□ -1.75
RSPO4Q2I0M5 MIR548A1-201ENST00000385041 97 ntBASIC4.14□□□□□ -1.75
RSPO4Q2I0M5 MT-TT-201ENST00000387460 66 ntBASIC4.14□□□□□ -1.75
RSPO4Q2I0M5 SNORA40C-201ENST00000391285 128 ntBASIC4.14□□□□□ -1.75
RSPO4Q2I0M5 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC4.14□□□□□ -1.75
RSPO4Q2I0M5 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.14□□□□□ -1.75
RSPO4Q2I0M5 AL589765.3-201ENST00000446084 462 ntBASIC4.14□□□□□ -1.75
RSPO4Q2I0M5 RPL39P29-201ENST00000447779 157 ntBASIC4.14□□□□□ -1.75
RSPO4Q2I0M5 AP001486.1-201ENST00000463339 476 ntBASIC4.14□□□□□ -1.75
RSPO4Q2I0M5 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC4.14□□□□□ -1.75
RSPO4Q2I0M5 RNU6-561P-201ENST00000516222 102 ntBASIC4.14□□□□□ -1.75
RSPO4Q2I0M5 FTH1P11-201ENST00000517577 551 ntBASIC4.14□□□□□ -1.75
RSPO4Q2I0M5 CYCSP23-201ENST00000519781 313 ntBASIC4.14□□□□□ -1.75
RSPO4Q2I0M5 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.14□□□□□ -1.75
RSPO4Q2I0M5 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC4.14□□□□□ -1.75
RSPO4Q2I0M5 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC4.14□□□□□ -1.75
RSPO4Q2I0M5 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.14□□□□□ -1.75
RSPO4Q2I0M5 AP001318.4-201ENST00000616637 121 ntBASIC4.14□□□□□ -1.75
RSPO4Q2I0M5 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
RSPO4Q2I0M5 AC004944.1-201ENST00000517807 3059 ntBASIC4.14□□□□□ -1.75
RSPO4Q2I0M5 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.14□□□□□ -1.75
RSPO4Q2I0M5 AC090971.4-201ENST00000560291 1800 ntBASIC4.14□□□□□ -1.75
RSPO4Q2I0M5 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
RSPO4Q2I0M5 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
RSPO4Q2I0M5 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
RSPO4Q2I0M5 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
RSPO4Q2I0M5 AC010329.5-201ENST00000623497 2174 ntBASIC4.13□□□□□ -1.75
RSPO4Q2I0M5 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
RSPO4Q2I0M5 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
RSPO4Q2I0M5 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.13□□□□□ -1.75
RSPO4Q2I0M5 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
RSPO4Q2I0M5 ACEA_U3.1-201ENST00000363057 217 ntBASIC4.13□□□□□ -1.75
RSPO4Q2I0M5 RNU6-873P-201ENST00000363833 107 ntBASIC4.13□□□□□ -1.75
RSPO4Q2I0M5 Y_RNA.287-201ENST00000364853 94 ntBASIC4.13□□□□□ -1.75
RSPO4Q2I0M5 RNU6-1310P-201ENST00000384153 107 ntBASIC4.13□□□□□ -1.75
RSPO4Q2I0M5 RNU6-166P-201ENST00000384371 107 ntBASIC4.13□□□□□ -1.75
RSPO4Q2I0M5 RNU6-554P-201ENST00000410466 106 ntBASIC4.13□□□□□ -1.75
RSPO4Q2I0M5 RPS20P14-201ENST00000412545 360 ntBASIC4.13□□□□□ -1.75
RSPO4Q2I0M5 RPS29P4-201ENST00000414733 161 ntBASIC4.13□□□□□ -1.75
RSPO4Q2I0M5 CYCSP49-201ENST00000420810 319 ntBASIC4.13□□□□□ -1.75
RSPO4Q2I0M5 AL358075.3-201ENST00000426289 226 ntBASIC4.13□□□□□ -1.75
RSPO4Q2I0M5 AL691449.1-201ENST00000426570 421 ntBASIC4.13□□□□□ -1.75
RSPO4Q2I0M5 AL135790.2-201ENST00000437701 267 ntBASIC4.13□□□□□ -1.75
RSPO4Q2I0M5 snoU109.2-201ENST00000459316 135 ntBASIC4.13□□□□□ -1.75
RSPO4Q2I0M5 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC4.13□□□□□ -1.75
RSPO4Q2I0M5 AC091874.1-201ENST00000511402 339 ntBASIC4.13□□□□□ -1.75
RSPO4Q2I0M5 RN7SKP277-201ENST00000516895 283 ntBASIC4.13□□□□□ -1.75
RSPO4Q2I0M5 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC4.13□□□□□ -1.75
RSPO4Q2I0M5 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC4.13□□□□□ -1.75
RSPO4Q2I0M5 TEX41-243ENST00000614173 190 ntTSL 5 BASIC4.13□□□□□ -1.75
RSPO4Q2I0M5 AL021997.2-201ENST00000615674 271 ntBASIC4.13□□□□□ -1.75
RSPO4Q2I0M5 AC138965.3-201ENST00000623875 498 ntBASIC4.13□□□□□ -1.75
RSPO4Q2I0M5 MIR4496-201ENST00000635896 61 ntBASIC4.13□□□□□ -1.75
RSPO4Q2I0M5 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
RSPO4Q2I0M5 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC4.13□□□□□ -1.75
RSPO4Q2I0M5 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
RSPO4Q2I0M5 Z82209.1-201ENST00000422141 2135 ntBASIC4.13□□□□□ -1.75
RSPO4Q2I0M5 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
RSPO4Q2I0M5 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
RSPO4Q2I0M5 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
RSPO4Q2I0M5 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
RSPO4Q2I0M5 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.13□□□□□ -1.75
RSPO4Q2I0M5 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.12□□□□□ -1.75
RSPO4Q2I0M5 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC4.12□□□□□ -1.75
RSPO4Q2I0M5 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.12□□□□□ -1.75
RSPO4Q2I0M5 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
RSPO4Q2I0M5 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
RSPO4Q2I0M5 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
RSPO4Q2I0M5 Y_RNA.114-201ENST00000363265 113 ntBASIC4.12□□□□□ -1.75
RSPO4Q2I0M5 RNU6-1048P-201ENST00000364054 107 ntBASIC4.12□□□□□ -1.75
RSPO4Q2I0M5 RNU6-728P-201ENST00000365375 104 ntBASIC4.12□□□□□ -1.75
RSPO4Q2I0M5 RNU6-142P-201ENST00000384019 107 ntBASIC4.12□□□□□ -1.75
RSPO4Q2I0M5 MIR30B-201ENST00000384850 88 ntBASIC4.12□□□□□ -1.75
RSPO4Q2I0M5 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
RSPO4Q2I0M5 RNU6-1228P-201ENST00000391014 107 ntBASIC4.12□□□□□ -1.75
RSPO4Q2I0M5 AL606845.1-201ENST00000404881 255 ntBASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 116 ms