Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 AL670379.1-201ENST00000604752 252 ntBASIC2.55□□□□□ -2
COL5A2P05997 AL670379.2-201ENST00000604983 252 ntBASIC2.55□□□□□ -2
COL5A2P05997 AL670379.5-201ENST00000605253 252 ntBASIC2.55□□□□□ -2
COL5A2P05997 AL670379.12-201ENST00000605291 253 ntBASIC2.55□□□□□ -2
COL5A2P05997 AL670379.8-201ENST00000605353 252 ntBASIC2.55□□□□□ -2
COL5A2P05997 AL670379.9-201ENST00000605428 253 ntBASIC2.55□□□□□ -2
COL5A2P05997 AC012443.1-201ENST00000605605 231 ntBASIC2.55□□□□□ -2
COL5A2P05997 AL670379.7-201ENST00000605823 252 ntBASIC2.55□□□□□ -2
COL5A2P05997 AC064836.2-201ENST00000609491 462 ntBASIC2.55□□□□□ -2
COL5A2P05997 AC006023.2-201ENST00000609916 167 ntBASIC2.55□□□□□ -2
COL5A2P05997 SNHG22-203ENST00000617833 660 ntBASIC2.55□□□□□ -2
COL5A2P05997 AP003400.5-201ENST00000624827 617 ntBASIC2.55□□□□□ -2
COL5A2P05997 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.55□□□□□ -2
COL5A2P05997 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC2.55□□□□□ -2
COL5A2P05997 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC2.55□□□□□ -2
COL5A2P05997 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.55□□□□□ -2
COL5A2P05997 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC2.54□□□□□ -2
COL5A2P05997 RNU6-288P-201ENST00000363690 104 ntBASIC2.54□□□□□ -2
COL5A2P05997 Y_RNA.166-201ENST00000363730 102 ntBASIC2.54□□□□□ -2
COL5A2P05997 RNU6-356P-201ENST00000384140 107 ntBASIC2.54□□□□□ -2
COL5A2P05997 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC2.54□□□□□ -2
COL5A2P05997 RNU4-62P-201ENST00000410125 130 ntBASIC2.54□□□□□ -2
COL5A2P05997 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.54□□□□□ -2
COL5A2P05997 HSPE1P1-201ENST00000421494 318 ntBASIC2.54□□□□□ -2
COL5A2P05997 TRAPPC2P3-201ENST00000443200 321 ntBASIC2.54□□□□□ -2
COL5A2P05997 AC020550.1-201ENST00000447385 163 ntBASIC2.54□□□□□ -2
COL5A2P05997 SSXP4-201ENST00000451349 245 ntBASIC2.54□□□□□ -2
COL5A2P05997 RNU7-180P-201ENST00000459240 63 ntBASIC2.54□□□□□ -2
COL5A2P05997 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC2.54□□□□□ -2
COL5A2P05997 RPL21P104-201ENST00000464143 478 ntBASIC2.54□□□□□ -2
COL5A2P05997 SCARNA15.1-201ENST00000516384 125 ntBASIC2.54□□□□□ -2
COL5A2P05997 Y_RNA.682-201ENST00000516457 100 ntBASIC2.54□□□□□ -2
COL5A2P05997 Y_RNA.689-201ENST00000516589 107 ntBASIC2.54□□□□□ -2
COL5A2P05997 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC2.54□□□□□ -2
COL5A2P05997 AP000763.2-201ENST00000540641 163 ntBASIC2.54□□□□□ -2
COL5A2P05997 MDM2-233ENST00000545204 398 ntTSL 5 BASIC2.54□□□□□ -2
COL5A2P05997 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC2.54□□□□□ -2
COL5A2P05997 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC2.54□□□□□ -2
COL5A2P05997 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.54□□□□□ -2
COL5A2P05997 uc_338.5-201ENST00000611839 155 ntBASIC2.54□□□□□ -2
COL5A2P05997 AL390240.1-201ENST00000612950 384 ntBASIC2.54□□□□□ -2
COL5A2P05997 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC2.54□□□□□ -2
COL5A2P05997 uc_338.15-201ENST00000615470 191 ntBASIC2.54□□□□□ -2
COL5A2P05997 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.54□□□□□ -2
COL5A2P05997 MTND4P23-201ENST00000447723 1363 ntBASIC2.53□□□□□ -2
COL5A2P05997 Y_RNA.384-201ENST00000383909 102 ntBASIC2.53□□□□□ -2
COL5A2P05997 AC027124.2-201ENST00000428249 105 ntBASIC2.53□□□□□ -2
COL5A2P05997 AC079780.1-201ENST00000428259 207 ntBASIC2.53□□□□□ -2
COL5A2P05997 MTCO3P45-201ENST00000443036 613 ntBASIC2.53□□□□□ -2
COL5A2P05997 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC2.53□□□□□ -2
COL5A2P05997 SCARNA18-201ENST00000459004 134 ntBASIC2.53□□□□□ -2
COL5A2P05997 Y_RNA.632-201ENST00000459189 102 ntBASIC2.53□□□□□ -2
COL5A2P05997 HMGN2P13-201ENST00000476476 274 ntBASIC2.53□□□□□ -2
COL5A2P05997 RNU6-123P-201ENST00000516163 102 ntBASIC2.53□□□□□ -2
COL5A2P05997 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC2.53□□□□□ -2
COL5A2P05997 SMILR-201ENST00000533992 553 ntTSL 4 BASIC2.53□□□□□ -2
COL5A2P05997 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC2.53□□□□□ -2
COL5A2P05997 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC2.53□□□□□ -2
COL5A2P05997 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC2.53□□□□□ -2
COL5A2P05997 MIR3942-201ENST00000585264 109 ntBASIC2.53□□□□□ -2
COL5A2P05997 DPPA3P3-201ENST00000603842 430 ntBASIC2.53□□□□□ -2
COL5A2P05997 AC021646.1-201ENST00000605469 484 ntBASIC2.53□□□□□ -2
COL5A2P05997 AC092807.2-201ENST00000609367 243 ntBASIC2.53□□□□□ -2
COL5A2P05997 AL137847.3-201ENST00000611521 109 ntBASIC2.53□□□□□ -2
COL5A2P05997 AL136164.4-201ENST00000625013 2135 ntBASIC2.53□□□□□ -2
COL5A2P05997 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
COL5A2P05997 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
COL5A2P05997 RNU6-1284P-201ENST00000363701 100 ntBASIC2.52□□□□□ -2.01
COL5A2P05997 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
COL5A2P05997 NDUFS5P1-201ENST00000405668 289 ntBASIC2.52□□□□□ -2.01
COL5A2P05997 RNU2-43P-201ENST00000410306 190 ntBASIC2.52□□□□□ -2.01
COL5A2P05997 AP1B1P2-201ENST00000416196 106 ntBASIC2.52□□□□□ -2.01
COL5A2P05997 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC2.52□□□□□ -2.01
COL5A2P05997 AC090774.1-201ENST00000435925 246 ntBASIC2.52□□□□□ -2.01
COL5A2P05997 snoU13.3-201ENST00000459441 104 ntBASIC2.52□□□□□ -2.01
COL5A2P05997 AC104564.1-201ENST00000493028 407 ntBASIC2.52□□□□□ -2.01
COL5A2P05997 CCDC34P1-201ENST00000507441 517 ntBASIC2.52□□□□□ -2.01
COL5A2P05997 RNU6-56P-201ENST00000516986 93 ntBASIC2.52□□□□□ -2.01
COL5A2P05997 RNU4-60P-201ENST00000517239 135 ntBASIC2.52□□□□□ -2.01
COL5A2P05997 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC2.52□□□□□ -2.01
COL5A2P05997 AC093012.1-202ENST00000549403 582 ntBASIC2.52□□□□□ -2.01
COL5A2P05997 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC2.52□□□□□ -2.01
COL5A2P05997 AC008521.1-201ENST00000587471 187 ntBASIC2.52□□□□□ -2.01
COL5A2P05997 AP000787.2-201ENST00000604432 568 ntBASIC2.52□□□□□ -2.01
COL5A2P05997 RPL23AP88-201ENST00000605759 454 ntBASIC2.52□□□□□ -2.01
COL5A2P05997 AL160413.1-201ENST00000622780 310 ntBASIC2.52□□□□□ -2.01
COL5A2P05997 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC2.52□□□□□ -2.01
COL5A2P05997 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
COL5A2P05997 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
COL5A2P05997 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.52□□□□□ -2.01
COL5A2P05997 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
COL5A2P05997 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
COL5A2P05997 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
COL5A2P05997 RNY1P10-201ENST00000363268 113 ntBASIC2.52□□□□□ -2.01
COL5A2P05997 RNU6-1155P-201ENST00000363554 107 ntBASIC2.52□□□□□ -2.01
COL5A2P05997 Y_RNA.301-201ENST00000364990 103 ntBASIC2.52□□□□□ -2.01
COL5A2P05997 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
COL5A2P05997 RNU6-1074P-201ENST00000383995 104 ntBASIC2.52□□□□□ -2.01
COL5A2P05997 RNU6-629P-201ENST00000384061 103 ntBASIC2.52□□□□□ -2.01
COL5A2P05997 MIR514A2-201ENST00000385131 88 ntBASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 115.7 ms