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Protein–RNA interactions for Protein: O75056
SDC3, Syndecan-3, human
Predictions only
Length
442 aa
.
Download Table
Protein
RNA
Prediction (catRAPID)
Interaction (ENCODE eCLIP)
Gene
UniProt Accession
Transcript Symbol
Ensembl Transcript ID
Length
Transcript Status
Prediction Score
Prediction z-Score
p-Value
Fold Change
SDC3
O75056
CCDC30-201
ENST00000340612
2664 nt
APPRIS P2
TSL 5
BASIC
2.13
□□□□□ -2.07
SDC3
O75056
SNX10-209
ENST00000619420
2361 nt
APPRIS ALT1
TSL 5
BASIC
2.12
□□□□□ -2.07
SDC3
O75056
OR5AK2-201
ENST00000326855
996 nt
APPRIS P1
BASIC
2.12
□□□□□ -2.07
SDC3
O75056
RNU6-1010P-201
ENST00000362757
107 nt
BASIC
2.12
□□□□□ -2.07
SDC3
O75056
SNORD114-19-201
ENST00000363072
75 nt
BASIC
2.12
□□□□□ -2.07
SDC3
O75056
RNU1-148P-201
ENST00000384472
162 nt
BASIC
2.12
□□□□□ -2.07
SDC3
O75056
5S_rRNA.2-201
ENST00000391293
112 nt
BASIC
2.12
□□□□□ -2.07
SDC3
O75056
SNORD23.1-201
ENST00000408212
104 nt
BASIC
2.12
□□□□□ -2.07
SDC3
O75056
RNU2-9P-201
ENST00000410194
145 nt
BASIC
2.12
□□□□□ -2.07
SDC3
O75056
AC004870.3-202
ENST00000412996
432 nt
TSL 3
BASIC
2.12
□□□□□ -2.07
SDC3
O75056
MTND1P23-201
ENST00000416931
372 nt
BASIC
2.12
□□□□□ -2.07
SDC3
O75056
AC011243.1-201
ENST00000420184
415 nt
TSL 3
BASIC
2.12
□□□□□ -2.07
SDC3
O75056
PGBD4P6-201
ENST00000421501
610 nt
BASIC
2.12
□□□□□ -2.07
SDC3
O75056
AC006333.1-201
ENST00000422401
410 nt
TSL 3
BASIC
2.12
□□□□□ -2.07
SDC3
O75056
MTCO2P19-201
ENST00000427513
598 nt
BASIC
2.12
□□□□□ -2.07
SDC3
O75056
AC073464.1-201
ENST00000429823
534 nt
BASIC
2.12
□□□□□ -2.07
SDC3
O75056
AL161788.1-201
ENST00000441805
169 nt
BASIC
2.12
□□□□□ -2.07
SDC3
O75056
MTND2P22-201
ENST00000444325
1033 nt
BASIC
2.12
□□□□□ -2.07
SDC3
O75056
AC092802.2-202
ENST00000444665
371 nt
TSL 5
BASIC
2.12
□□□□□ -2.07
SDC3
O75056
AC069542.1-201
ENST00000445235
557 nt
TSL 3
BASIC
2.12
□□□□□ -2.07
SDC3
O75056
AL138830.2-202
ENST00000446358
786 nt
TSL 2
BASIC
2.12
□□□□□ -2.07
SDC3
O75056
MIR4435-2HG-213
ENST00000451884
423 nt
TSL 3
BASIC
2.12
□□□□□ -2.07
SDC3
O75056
AC006512.1-201
ENST00000468816
291 nt
BASIC
2.12
□□□□□ -2.07
SDC3
O75056
RPS3AP17-201
ENST00000472594
777 nt
BASIC
2.12
□□□□□ -2.07
SDC3
O75056
AC079943.1-201
ENST00000491909
466 nt
TSL 3
BASIC
2.12
□□□□□ -2.07
SDC3
O75056
RPL38P4-201
ENST00000502376
214 nt
BASIC
2.12
□□□□□ -2.07
SDC3
O75056
AC093534.1-201
ENST00000504977
132 nt
BASIC
2.12
□□□□□ -2.07
SDC3
O75056
AC117522.2-201
ENST00000510049
657 nt
BASIC
2.12
□□□□□ -2.07
SDC3
O75056
AC004054.1-201
ENST00000515111
270 nt
TSL 3
BASIC
2.12
□□□□□ -2.07
SDC3
O75056
SNORA43.2-201
ENST00000516652
128 nt
BASIC
2.12
□□□□□ -2.07
SDC3
O75056
RNU7-193P-201
ENST00000516723
65 nt
BASIC
2.12
□□□□□ -2.07
SDC3
O75056
RN7SKP219-201
ENST00000516825
296 nt
BASIC
2.12
□□□□□ -2.07
SDC3
O75056
FAM92A-209
ENST00000519679
538 nt
TSL 4
BASIC
2.12
□□□□□ -2.07
SDC3
O75056
IGHVIII-5-1-201
ENST00000523059
99 nt
BASIC
2.12
□□□□□ -2.07
SDC3
O75056
AL135746.1-201
ENST00000554205
547 nt
TSL 3
BASIC
2.12
□□□□□ -2.07
SDC3
O75056
PSMA3P-201
ENST00000555485
635 nt
BASIC
2.12
□□□□□ -2.07
SDC3
O75056
AC087463.2-201
ENST00000565943
472 nt
TSL 3
BASIC
2.12
□□□□□ -2.07
SDC3
O75056
AGGF1P4-201
ENST00000568249
801 nt
BASIC
2.12
□□□□□ -2.07
SDC3
O75056
MIR3126-201
ENST00000577443
74 nt
BASIC
2.12
□□□□□ -2.07
SDC3
O75056
AC005154.1-222
ENST00000579024
341 nt
TSL 5
BASIC
2.12
□□□□□ -2.07
SDC3
O75056
BNIP3P30-201
ENST00000601184
574 nt
BASIC
2.12
□□□□□ -2.07
SDC3
O75056
AL391646.1-201
ENST00000603860
190 nt
BASIC
2.12
□□□□□ -2.07
SDC3
O75056
AC021646.1-201
ENST00000605469
484 nt
BASIC
2.12
□□□□□ -2.07
SDC3
O75056
AL121917.1-203
ENST00000605534
577 nt
BASIC
2.12
□□□□□ -2.07
SDC3
O75056
C8orf59-209
ENST00000612977
586 nt
APPRIS P1
TSL 2
BASIC
2.12
□□□□□ -2.07
SDC3
O75056
AC009090.3-201
ENST00000616553
565 nt
BASIC
2.12
□□□□□ -2.07
SDC3
O75056
HOTAIRM1_5.1-201
ENST00000619311
145 nt
BASIC
2.12
□□□□□ -2.07
SDC3
O75056
AC006355.2-201
ENST00000629240
317 nt
TSL 3
BASIC
2.12
□□□□□ -2.07
SDC3
O75056
MIR219B-201
ENST00000637023
88 nt
BASIC
2.12
□□□□□ -2.07
SDC3
O75056
Clostridiales-1.3-201
ENST00000637703
147 nt
BASIC
2.12
□□□□□ -2.07
SDC3
O75056
AL160287.1-202
ENST00000638113
454 nt
TSL 5
BASIC
2.12
□□□□□ -2.07
SDC3
O75056
ESF1-202
ENST00000617257
1470 nt
TSL 5
BASIC
2.12
□□□□□ -2.07
SDC3
O75056
RBBP8P1-201
ENST00000449447
1844 nt
BASIC
2.12
□□□□□ -2.07
SDC3
O75056
AL596028.1-201
ENST00000326971
197 nt
BASIC
2.11
□□□□□ -2.07
SDC3
O75056
RNU1-72P-201
ENST00000362976
153 nt
BASIC
2.11
□□□□□ -2.07
SDC3
O75056
AC093382.1-201
ENST00000413311
379 nt
TSL 5
BASIC
2.11
□□□□□ -2.07
SDC3
O75056
TTTY16-201
ENST00000437686
192 nt
TSL 1 (best)
BASIC
2.11
□□□□□ -2.07
SDC3
O75056
AC009238.1-201
ENST00000442165
424 nt
BASIC
2.11
□□□□□ -2.07
SDC3
O75056
AC009237.6-201
ENST00000446969
424 nt
BASIC
2.11
□□□□□ -2.07
SDC3
O75056
AC005703.2-201
ENST00000453339
343 nt
TSL 2
BASIC
2.11
□□□□□ -2.07
SDC3
O75056
AL353780.1-201
ENST00000455583
458 nt
TSL 2
BASIC
2.11
□□□□□ -2.07
SDC3
O75056
MTCO3P9-201
ENST00000506989
781 nt
BASIC
2.11
□□□□□ -2.07
SDC3
O75056
SCARNA16.3-201
ENST00000516595
184 nt
BASIC
2.11
□□□□□ -2.07
SDC3
O75056
RNU6-1178P-201
ENST00000516674
107 nt
BASIC
2.11
□□□□□ -2.07
SDC3
O75056
HSPE1P18-201
ENST00000517602
280 nt
BASIC
2.11
□□□□□ -2.07
SDC3
O75056
AC109329.1-201
ENST00000518744
317 nt
BASIC
2.11
□□□□□ -2.07
SDC3
O75056
LINC02055-204
ENST00000521034
432 nt
TSL 5
BASIC
2.11
□□□□□ -2.07
SDC3
O75056
CYCSP26-201
ENST00000534107
320 nt
BASIC
2.11
□□□□□ -2.07
SDC3
O75056
AC133480.1-201
ENST00000547563
381 nt
TSL 3
BASIC
2.11
□□□□□ -2.07
SDC3
O75056
MTCO3P23-201
ENST00000561363
289 nt
BASIC
2.11
□□□□□ -2.07
SDC3
O75056
AC044840.1-201
ENST00000577641
472 nt
TSL 3
BASIC
2.11
□□□□□ -2.07
SDC3
O75056
ZNF788-206
ENST00000596883
692 nt
TSL 3
BASIC
2.11
□□□□□ -2.07
SDC3
O75056
AC009318.2-201
ENST00000610917
651 nt
BASIC
2.11
□□□□□ -2.07
SDC3
O75056
SRP54-214
ENST00000630962
162 nt
TSL 5
BASIC
2.11
□□□□□ -2.07
SDC3
O75056
TXLNGY-201
ENST00000253320
7299 nt
TSL 2
BASIC
2.11
□□□□□ -2.07
SDC3
O75056
ZNF720P1-201
ENST00000562403
1939 nt
BASIC
2.11
□□□□□ -2.07
SDC3
O75056
NEDD4-205
ENST00000506154
6751 nt
TSL 1 (best)
BASIC
2.1
□□□□□ -2.07
SDC3
O75056
KTN1-203
ENST00000395309
4021 nt
APPRIS ALT2
TSL 5
BASIC
2.1
□□□□□ -2.07
SDC3
O75056
LINC00305-201
ENST00000323355
873 nt
TSL 1 (best)
BASIC
2.1
□□□□□ -2.07
SDC3
O75056
MIRLET7G-201
ENST00000362280
84 nt
BASIC
2.1
□□□□□ -2.07
SDC3
O75056
Y_RNA.296-201
ENST00000364930
108 nt
BASIC
2.1
□□□□□ -2.07
SDC3
O75056
TXNDC8-203
ENST00000374511
472 nt
APPRIS ALT2
TSL 5
BASIC
2.1
□□□□□ -2.07
SDC3
O75056
RNU6-622P-201
ENST00000384272
103 nt
BASIC
2.1
□□□□□ -2.07
SDC3
O75056
RNU6-1127P-201
ENST00000384580
107 nt
BASIC
2.1
□□□□□ -2.07
SDC3
O75056
CTNNA2-204
ENST00000409266
432 nt
TSL 3
BASIC
2.1
□□□□□ -2.07
SDC3
O75056
AL589986.2-201
ENST00000429352
397 nt
TSL 2
BASIC
2.1
□□□□□ -2.07
SDC3
O75056
WARS2P1-201
ENST00000429678
537 nt
BASIC
2.1
□□□□□ -2.07
SDC3
O75056
AL365400.1-201
ENST00000431854
640 nt
BASIC
2.1
□□□□□ -2.07
SDC3
O75056
LANCL1-AS1-203
ENST00000433296
864 nt
TSL 2
BASIC
2.1
□□□□□ -2.07
SDC3
O75056
AC016691.1-201
ENST00000441321
413 nt
BASIC
2.1
□□□□□ -2.07
SDC3
O75056
AC004930.1-201
ENST00000470677
254 nt
TSL 2
BASIC
2.1
□□□□□ -2.07
SDC3
O75056
AP001025.1-201
ENST00000486139
332 nt
BASIC
2.1
□□□□□ -2.07
SDC3
O75056
AC027343.1-201
ENST00000504765
407 nt
TSL 4
BASIC
2.1
□□□□□ -2.07
SDC3
O75056
RNU6-405P-201
ENST00000516637
110 nt
BASIC
2.1
□□□□□ -2.07
SDC3
O75056
SNORA31.23-201
ENST00000517219
133 nt
BASIC
2.1
□□□□□ -2.07
SDC3
O75056
BNIP3P6-201
ENST00000549284
499 nt
BASIC
2.1
□□□□□ -2.07
SDC3
O75056
NDUFAF4P1-201
ENST00000559425
519 nt
BASIC
2.1
□□□□□ -2.07
SDC3
O75056
UBE2Q2P8-201
ENST00000560644
102 nt
BASIC
2.1
□□□□□ -2.07
SDC3
O75056
MTCYBP33-201
ENST00000575007
1130 nt
BASIC
2.1
□□□□□ -2.07
SDC3
O75056
AC008752.3-201
ENST00000588113
712 nt
BASIC
2.1
□□□□□ -2.07
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