Protein–RNA interactions for Protein: O60548

FOXD2, Forkhead box protein D2, humanhuman

Predicted RBP Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD2O60548 AC006504.1-201ENST00000562493 3666 ntBASIC3.88□□□□□ -1.79
FOXD2O60548 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC3.88□□□□□ -1.79
FOXD2O60548 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.88□□□□□ -1.79
FOXD2O60548 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.88□□□□□ -1.79
FOXD2O60548 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
FOXD2O60548 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC3.88□□□□□ -1.79
FOXD2O60548 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.88□□□□□ -1.79
FOXD2O60548 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
FOXD2O60548 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC3.88□□□□□ -1.79
FOXD2O60548 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
FOXD2O60548 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
FOXD2O60548 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
FOXD2O60548 SNORA63.4-201ENST00000362763 126 ntBASIC3.87□□□□□ -1.79
FOXD2O60548 U3.13-201ENST00000364804 214 ntBASIC3.87□□□□□ -1.79
FOXD2O60548 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
FOXD2O60548 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
FOXD2O60548 U3.19-201ENST00000390893 196 ntBASIC3.87□□□□□ -1.79
FOXD2O60548 RNU6-754P-201ENST00000391166 107 ntBASIC3.87□□□□□ -1.79
FOXD2O60548 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
FOXD2O60548 RNU2-61P-201ENST00000411069 191 ntBASIC3.87□□□□□ -1.79
FOXD2O60548 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.87□□□□□ -1.79
FOXD2O60548 RAB28P5-201ENST00000427490 651 ntBASIC3.87□□□□□ -1.79
FOXD2O60548 AC011742.1-201ENST00000431448 434 ntBASIC3.87□□□□□ -1.79
FOXD2O60548 BX276092.4-201ENST00000452056 248 ntBASIC3.87□□□□□ -1.79
FOXD2O60548 RPL31P60-201ENST00000478450 367 ntBASIC3.87□□□□□ -1.79
FOXD2O60548 AC010409.1-201ENST00000487382 476 ntBASIC3.87□□□□□ -1.79
FOXD2O60548 AC104619.4-201ENST00000510773 249 ntBASIC3.87□□□□□ -1.79
FOXD2O60548 RNU6-1333P-201ENST00000516162 93 ntBASIC3.87□□□□□ -1.79
FOXD2O60548 RNU1-103P-201ENST00000516502 125 ntBASIC3.87□□□□□ -1.79
FOXD2O60548 RNU4ATAC10P-201ENST00000516967 122 ntBASIC3.87□□□□□ -1.79
FOXD2O60548 RN7SKP57-201ENST00000517248 293 ntBASIC3.87□□□□□ -1.79
FOXD2O60548 AC025755.1-201ENST00000521306 278 ntBASIC3.87□□□□□ -1.79
FOXD2O60548 AP006245.1-201ENST00000522549 120 ntBASIC3.87□□□□□ -1.79
FOXD2O60548 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.87□□□□□ -1.79
FOXD2O60548 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.87□□□□□ -1.79
FOXD2O60548 OR1M4P-201ENST00000589199 287 ntBASIC3.87□□□□□ -1.79
FOXD2O60548 AC091167.4-201ENST00000605079 184 ntBASIC3.87□□□□□ -1.79
FOXD2O60548 BRDTP1-201ENST00000605735 677 ntBASIC3.87□□□□□ -1.79
FOXD2O60548 Y_RNA.772-201ENST00000606692 102 ntBASIC3.87□□□□□ -1.79
FOXD2O60548 AC007998.5-201ENST00000622938 237 ntBASIC3.87□□□□□ -1.79
FOXD2O60548 AC097372.5-201ENST00000623665 376 ntBASIC3.87□□□□□ -1.79
FOXD2O60548 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.87□□□□□ -1.79
FOXD2O60548 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
FOXD2O60548 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
FOXD2O60548 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.87□□□□□ -1.79
FOXD2O60548 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
FOXD2O60548 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
FOXD2O60548 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC3.86□□□□□ -1.79
FOXD2O60548 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
FOXD2O60548 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
FOXD2O60548 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC3.86□□□□□ -1.79
FOXD2O60548 RNU4-90P-201ENST00000362773 141 ntBASIC3.86□□□□□ -1.79
FOXD2O60548 Y_RNA.71-201ENST00000362892 104 ntBASIC3.86□□□□□ -1.79
FOXD2O60548 RNA5SP50-201ENST00000363731 107 ntBASIC3.86□□□□□ -1.79
FOXD2O60548 RNU6-326P-201ENST00000365480 107 ntBASIC3.86□□□□□ -1.79
FOXD2O60548 Y_RNA.358-201ENST00000365491 99 ntBASIC3.86□□□□□ -1.79
FOXD2O60548 SNORD82-201ENST00000365530 70 ntBASIC3.86□□□□□ -1.79
FOXD2O60548 RNU6-449P-201ENST00000383914 107 ntBASIC3.86□□□□□ -1.79
FOXD2O60548 RNY3P4-201ENST00000384428 101 ntBASIC3.86□□□□□ -1.79
FOXD2O60548 MIR591-201ENST00000385290 95 ntBASIC3.86□□□□□ -1.79
FOXD2O60548 Y_RNA.590-201ENST00000410140 107 ntBASIC3.86□□□□□ -1.79
FOXD2O60548 RNU2-15P-201ENST00000410692 191 ntBASIC3.86□□□□□ -1.79
FOXD2O60548 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC3.86□□□□□ -1.79
FOXD2O60548 AC008264.1-201ENST00000447612 367 ntBASIC3.86□□□□□ -1.79
FOXD2O60548 HMGB3P8-201ENST00000449709 577 ntBASIC3.86□□□□□ -1.79
FOXD2O60548 RPS11P1-201ENST00000451072 473 ntBASIC3.86□□□□□ -1.79
FOXD2O60548 RPL31P13-201ENST00000484151 370 ntBASIC3.86□□□□□ -1.79
FOXD2O60548 RN7SKP277-201ENST00000516895 283 ntBASIC3.86□□□□□ -1.79
FOXD2O60548 RN7SKP234-201ENST00000517173 224 ntBASIC3.86□□□□□ -1.79
FOXD2O60548 AC069113.1-201ENST00000517763 267 ntBASIC3.86□□□□□ -1.79
FOXD2O60548 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC3.86□□□□□ -1.79
FOXD2O60548 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.86□□□□□ -1.79
FOXD2O60548 AC006077.1-201ENST00000604746 343 ntBASIC3.86□□□□□ -1.79
FOXD2O60548 SNHG22-203ENST00000617833 660 ntBASIC3.86□□□□□ -1.79
FOXD2O60548 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.86□□□□□ -1.79
FOXD2O60548 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC3.86□□□□□ -1.79
FOXD2O60548 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
FOXD2O60548 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
FOXD2O60548 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.86□□□□□ -1.79
FOXD2O60548 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
FOXD2O60548 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.85□□□□□ -1.79
FOXD2O60548 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC3.85□□□□□ -1.79
FOXD2O60548 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC3.85□□□□□ -1.79
FOXD2O60548 MTND5P9-201ENST00000503854 1755 ntBASIC3.85□□□□□ -1.79
FOXD2O60548 Y_RNA.82-201ENST00000363000 102 ntBASIC3.85□□□□□ -1.79
FOXD2O60548 Y_RNA.92-201ENST00000363043 102 ntBASIC3.85□□□□□ -1.79
FOXD2O60548 SNORD35B-201ENST00000363660 87 ntBASIC3.85□□□□□ -1.79
FOXD2O60548 RNVU1-3-201ENST00000364313 161 ntBASIC3.85□□□□□ -1.79
FOXD2O60548 Y_RNA.235-201ENST00000364412 102 ntBASIC3.85□□□□□ -1.79
FOXD2O60548 Y_RNA.275-201ENST00000364726 110 ntBASIC3.85□□□□□ -1.79
FOXD2O60548 Y_RNA.286-201ENST00000364813 102 ntBASIC3.85□□□□□ -1.79
FOXD2O60548 Y_RNA.306-201ENST00000365015 102 ntBASIC3.85□□□□□ -1.79
FOXD2O60548 Y_RNA.308-201ENST00000365043 101 ntBASIC3.85□□□□□ -1.79
FOXD2O60548 Y_RNA.312-201ENST00000365089 102 ntBASIC3.85□□□□□ -1.79
FOXD2O60548 Y_RNA.322-201ENST00000365151 102 ntBASIC3.85□□□□□ -1.79
FOXD2O60548 MIR1251-201ENST00000408552 70 ntBASIC3.85□□□□□ -1.79
FOXD2O60548 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.85□□□□□ -1.79
FOXD2O60548 AL160275.3-201ENST00000423876 471 ntBASIC3.85□□□□□ -1.79
FOXD2O60548 AL358472.1-201ENST00000431295 329 ntBASIC3.85□□□□□ -1.79
FOXD2O60548 MTCO1P5-201ENST00000433573 344 ntBASIC3.85□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 94.3 ms