Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 AL591473.1-201ENST00000464297 313 ntBASIC4.26□□□□□ -1.73
SOX1O00570 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC4.26□□□□□ -1.73
SOX1O00570 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC4.26□□□□□ -1.73
SOX1O00570 MIR5695-201ENST00000579717 85 ntBASIC4.26□□□□□ -1.73
SOX1O00570 AC073349.3-201ENST00000617616 186 ntBASIC4.26□□□□□ -1.73
SOX1O00570 AC091905.2-201ENST00000623143 306 ntBASIC4.26□□□□□ -1.73
SOX1O00570 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
SOX1O00570 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.26□□□□□ -1.73
SOX1O00570 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
SOX1O00570 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
SOX1O00570 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.26□□□□□ -1.73
SOX1O00570 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
SOX1O00570 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC4.25□□□□□ -1.73
SOX1O00570 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SOX1O00570 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.25□□□□□ -1.73
SOX1O00570 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
SOX1O00570 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SOX1O00570 RNA5SP307-201ENST00000362863 116 ntBASIC4.25□□□□□ -1.73
SOX1O00570 RNU6-1175P-201ENST00000365200 107 ntBASIC4.25□□□□□ -1.73
SOX1O00570 RNU6-898P-201ENST00000365627 104 ntBASIC4.25□□□□□ -1.73
SOX1O00570 Y_RNA.435-201ENST00000384095 112 ntBASIC4.25□□□□□ -1.73
SOX1O00570 U8.10-201ENST00000384260 133 ntBASIC4.25□□□□□ -1.73
SOX1O00570 RNU6-804P-201ENST00000384286 107 ntBASIC4.25□□□□□ -1.73
SOX1O00570 RNU6-658P-201ENST00000384606 106 ntBASIC4.25□□□□□ -1.73
SOX1O00570 HLFP1-201ENST00000402375 499 ntBASIC4.25□□□□□ -1.73
SOX1O00570 AC097462.2-201ENST00000504623 481 ntBASIC4.25□□□□□ -1.73
SOX1O00570 RNU6-58P-201ENST00000517143 103 ntBASIC4.25□□□□□ -1.73
SOX1O00570 AC090281.1-201ENST00000523019 276 ntBASIC4.25□□□□□ -1.73
SOX1O00570 AL391261.3-201ENST00000557194 520 ntBASIC4.25□□□□□ -1.73
SOX1O00570 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC4.25□□□□□ -1.73
SOX1O00570 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC4.25□□□□□ -1.73
SOX1O00570 MIR3945-201ENST00000581853 98 ntBASIC4.25□□□□□ -1.73
SOX1O00570 MIR4672-201ENST00000583126 81 ntBASIC4.25□□□□□ -1.73
SOX1O00570 FTX_3.1-201ENST00000610451 147 ntBASIC4.25□□□□□ -1.73
SOX1O00570 AC013412.1-201ENST00000610687 192 ntBASIC4.25□□□□□ -1.73
SOX1O00570 AC006001.4-201ENST00000622243 395 ntBASIC4.25□□□□□ -1.73
SOX1O00570 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC4.25□□□□□ -1.73
SOX1O00570 IGHVIII-44-202ENST00000636235 289 ntBASIC4.25□□□□□ -1.73
SOX1O00570 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SOX1O00570 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
SOX1O00570 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SOX1O00570 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
SOX1O00570 AC135776.4-201ENST00000624300 1904 ntBASIC4.25□□□□□ -1.73
SOX1O00570 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
SOX1O00570 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
SOX1O00570 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.24□□□□□ -1.73
SOX1O00570 BX322639.1-202ENST00000423987 2213 ntBASIC4.24□□□□□ -1.73
SOX1O00570 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
SOX1O00570 FTLP6-201ENST00000355274 422 ntBASIC4.24□□□□□ -1.73
SOX1O00570 Y_RNA.8-201ENST00000362353 102 ntBASIC4.24□□□□□ -1.73
SOX1O00570 RNU6-961P-201ENST00000363893 105 ntBASIC4.24□□□□□ -1.73
SOX1O00570 SNORD66.1-201ENST00000391230 76 ntBASIC4.24□□□□□ -1.73
SOX1O00570 RNU6-1001P-201ENST00000411265 100 ntBASIC4.24□□□□□ -1.73
SOX1O00570 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC4.24□□□□□ -1.73
SOX1O00570 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC4.24□□□□□ -1.73
SOX1O00570 POLR2KP2-201ENST00000438155 177 ntBASIC4.24□□□□□ -1.73
SOX1O00570 RPS26P2-201ENST00000440331 348 ntBASIC4.24□□□□□ -1.73
SOX1O00570 SNORD2.1-201ENST00000458762 69 ntBASIC4.24□□□□□ -1.73
SOX1O00570 RN7SL271P-201ENST00000487601 295 ntBASIC4.24□□□□□ -1.73
SOX1O00570 RNU6-1282P-201ENST00000516735 96 ntBASIC4.24□□□□□ -1.73
SOX1O00570 MTND5P41-201ENST00000517498 206 ntBASIC4.24□□□□□ -1.73
SOX1O00570 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
SOX1O00570 CR383656.8-201ENST00000549046 145 ntBASIC4.24□□□□□ -1.73
SOX1O00570 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.24□□□□□ -1.73
SOX1O00570 MIR432-201ENST00000606207 94 ntBASIC4.24□□□□□ -1.73
SOX1O00570 U2.21-201ENST00000637295 81 ntBASIC4.24□□□□□ -1.73
SOX1O00570 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
SOX1O00570 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
SOX1O00570 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
SOX1O00570 RNA5SP197-201ENST00000363357 119 ntBASIC4.23□□□□□ -1.73
SOX1O00570 RNU6-923P-201ENST00000364753 107 ntBASIC4.23□□□□□ -1.73
SOX1O00570 RNA5SP97-201ENST00000365006 84 ntBASIC4.23□□□□□ -1.73
SOX1O00570 SNORD116-20-201ENST00000384529 92 ntBASIC4.23□□□□□ -1.73
SOX1O00570 MIR325-201ENST00000385260 98 ntBASIC4.23□□□□□ -1.73
SOX1O00570 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
SOX1O00570 MIR1911-201ENST00000410783 80 ntBASIC4.23□□□□□ -1.73
SOX1O00570 AL358075.3-201ENST00000426289 226 ntBASIC4.23□□□□□ -1.73
SOX1O00570 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC4.23□□□□□ -1.73
SOX1O00570 SNORA40.9-201ENST00000515895 93 ntBASIC4.23□□□□□ -1.73
SOX1O00570 AP005660.1-201ENST00000522972 293 ntBASIC4.23□□□□□ -1.73
SOX1O00570 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC4.23□□□□□ -1.73
SOX1O00570 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC4.23□□□□□ -1.73
SOX1O00570 RPL21P9-201ENST00000556149 474 ntBASIC4.23□□□□□ -1.73
SOX1O00570 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC4.23□□□□□ -1.73
SOX1O00570 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC4.23□□□□□ -1.73
SOX1O00570 UBL5P4-201ENST00000562584 236 ntBASIC4.23□□□□□ -1.73
SOX1O00570 AC025627.2-201ENST00000576220 160 ntBASIC4.23□□□□□ -1.73
SOX1O00570 MIR5571-201ENST00000577998 113 ntBASIC4.23□□□□□ -1.73
SOX1O00570 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC4.23□□□□□ -1.73
SOX1O00570 AC108706.1-201ENST00000611053 297 ntBASIC4.23□□□□□ -1.73
SOX1O00570 AC104465.1-201ENST00000611365 139 ntBASIC4.23□□□□□ -1.73
SOX1O00570 SNORA43.4-201ENST00000629559 138 ntBASIC4.23□□□□□ -1.73
SOX1O00570 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.23□□□□□ -1.73
SOX1O00570 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
SOX1O00570 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
SOX1O00570 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
SOX1O00570 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
SOX1O00570 AL035425.3-201ENST00000564206 4996 ntBASIC4.23□□□□□ -1.73
SOX1O00570 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
SOX1O00570 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms