Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 AL031274.1-201ENST00000450334 232 ntBASIC2.3□□□□□ -2.04
NPIPA3F8WFD2 MTND3P16-201ENST00000452205 344 ntBASIC2.3□□□□□ -2.04
NPIPA3F8WFD2 AC087884.1-201ENST00000469738 328 ntBASIC2.3□□□□□ -2.04
NPIPA3F8WFD2 AC079140.5-201ENST00000507882 310 ntBASIC2.3□□□□□ -2.04
NPIPA3F8WFD2 RN7SKP24-201ENST00000515888 284 ntBASIC2.3□□□□□ -2.04
NPIPA3F8WFD2 RNA5SP320-201ENST00000516263 124 ntBASIC2.3□□□□□ -2.04
NPIPA3F8WFD2 RNA5SP76-201ENST00000516277 87 ntBASIC2.3□□□□□ -2.04
NPIPA3F8WFD2 AC069113.1-201ENST00000517763 267 ntBASIC2.3□□□□□ -2.04
NPIPA3F8WFD2 AC243972.3-201ENST00000539655 198 ntBASIC2.3□□□□□ -2.04
NPIPA3F8WFD2 AP002770.2-201ENST00000543613 532 ntBASIC2.3□□□□□ -2.04
NPIPA3F8WFD2 OR11H5P-201ENST00000554039 926 ntBASIC2.3□□□□□ -2.04
NPIPA3F8WFD2 EIF1P4-201ENST00000572664 335 ntBASIC2.3□□□□□ -2.04
NPIPA3F8WFD2 MIR5092-201ENST00000583139 88 ntBASIC2.3□□□□□ -2.04
NPIPA3F8WFD2 MIR4658-201ENST00000584344 65 ntBASIC2.3□□□□□ -2.04
NPIPA3F8WFD2 VN1R80P-201ENST00000597126 338 ntBASIC2.3□□□□□ -2.04
NPIPA3F8WFD2 AC073410.2-201ENST00000603240 332 ntBASIC2.3□□□□□ -2.04
NPIPA3F8WFD2 RNU6-85P-201ENST00000605989 107 ntBASIC2.3□□□□□ -2.04
NPIPA3F8WFD2 HMGB1P24-202ENST00000615653 685 ntBASIC2.3□□□□□ -2.04
NPIPA3F8WFD2 U4.3-201ENST00000621047 82 ntBASIC2.3□□□□□ -2.04
NPIPA3F8WFD2 YWHAEP7-203ENST00000622054 312 ntBASIC2.3□□□□□ -2.04
NPIPA3F8WFD2 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.3□□□□□ -2.04
NPIPA3F8WFD2 AC068137.4-201ENST00000638485 296 ntBASIC2.3□□□□□ -2.04
NPIPA3F8WFD2 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
NPIPA3F8WFD2 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.29□□□□□ -2.04
NPIPA3F8WFD2 RNU6-529P-201ENST00000363383 104 ntBASIC2.29□□□□□ -2.04
NPIPA3F8WFD2 RNU6-487P-201ENST00000365430 104 ntBASIC2.29□□□□□ -2.04
NPIPA3F8WFD2 RNU4-20P-201ENST00000365601 151 ntBASIC2.29□□□□□ -2.04
NPIPA3F8WFD2 Y_RNA.378-201ENST00000365652 113 ntBASIC2.29□□□□□ -2.04
NPIPA3F8WFD2 RNU1-57P-201ENST00000384491 166 ntBASIC2.29□□□□□ -2.04
NPIPA3F8WFD2 AC009963.1-201ENST00000417265 157 ntBASIC2.29□□□□□ -2.04
NPIPA3F8WFD2 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC2.29□□□□□ -2.04
NPIPA3F8WFD2 RPS3AP44-201ENST00000425466 790 ntBASIC2.29□□□□□ -2.04
NPIPA3F8WFD2 C8orf59P1-201ENST00000429930 303 ntBASIC2.29□□□□□ -2.04
NPIPA3F8WFD2 SEPT14P3-201ENST00000439401 183 ntBASIC2.29□□□□□ -2.04
NPIPA3F8WFD2 TRAPPC2P3-201ENST00000443200 321 ntBASIC2.29□□□□□ -2.04
NPIPA3F8WFD2 AL732372.2-207ENST00000445840 183 ntBASIC2.29□□□□□ -2.04
NPIPA3F8WFD2 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
NPIPA3F8WFD2 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
NPIPA3F8WFD2 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC2.29□□□□□ -2.04
NPIPA3F8WFD2 SEPT14P2-201ENST00000453405 183 ntBASIC2.29□□□□□ -2.04
NPIPA3F8WFD2 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC2.29□□□□□ -2.04
NPIPA3F8WFD2 AC133134.1-201ENST00000466800 359 ntBASIC2.29□□□□□ -2.04
NPIPA3F8WFD2 RPL21P99-201ENST00000480369 423 ntBASIC2.29□□□□□ -2.04
NPIPA3F8WFD2 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.29□□□□□ -2.04
NPIPA3F8WFD2 SEPT14P4-201ENST00000513445 186 ntBASIC2.29□□□□□ -2.04
NPIPA3F8WFD2 FO082796.1-201ENST00000523795 183 ntBASIC2.29□□□□□ -2.04
NPIPA3F8WFD2 CENPUP1-201ENST00000526649 1202 ntBASIC2.29□□□□□ -2.04
NPIPA3F8WFD2 AC090115.3-201ENST00000553218 849 ntBASIC2.29□□□□□ -2.04
NPIPA3F8WFD2 AL118558.2-201ENST00000556294 238 ntBASIC2.29□□□□□ -2.04
NPIPA3F8WFD2 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC2.29□□□□□ -2.04
NPIPA3F8WFD2 AL138976.2-201ENST00000563989 694 ntBASIC2.29□□□□□ -2.04
NPIPA3F8WFD2 SNORD53-201ENST00000579969 78 ntBASIC2.29□□□□□ -2.04
NPIPA3F8WFD2 AC090897.2-201ENST00000581715 130 ntBASIC2.29□□□□□ -2.04
NPIPA3F8WFD2 MIR3941-201ENST00000582572 103 ntBASIC2.29□□□□□ -2.04
NPIPA3F8WFD2 AL162413.1-201ENST00000603198 110 ntBASIC2.29□□□□□ -2.04
NPIPA3F8WFD2 AC092747.3-201ENST00000603769 301 ntBASIC2.29□□□□□ -2.04
NPIPA3F8WFD2 AL590808.1-201ENST00000618696 141 ntBASIC2.29□□□□□ -2.04
NPIPA3F8WFD2 CTSLP2-204ENST00000629029 392 ntBASIC2.29□□□□□ -2.04
NPIPA3F8WFD2 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
NPIPA3F8WFD2 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.28□□□□□ -2.04
NPIPA3F8WFD2 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.28□□□□□ -2.04
NPIPA3F8WFD2 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.28□□□□□ -2.04
NPIPA3F8WFD2 RNU6-1010P-201ENST00000362757 107 ntBASIC2.28□□□□□ -2.04
NPIPA3F8WFD2 RNU6-428P-201ENST00000362942 107 ntBASIC2.28□□□□□ -2.04
NPIPA3F8WFD2 SNORA38-201ENST00000363946 132 ntBASIC2.28□□□□□ -2.04
NPIPA3F8WFD2 RNU6-1090P-201ENST00000364065 94 ntBASIC2.28□□□□□ -2.04
NPIPA3F8WFD2 RNU6-1215P-201ENST00000384441 102 ntBASIC2.28□□□□□ -2.04
NPIPA3F8WFD2 Y_RNA.516-201ENST00000384541 124 ntBASIC2.28□□□□□ -2.04
NPIPA3F8WFD2 Y_RNA.554-201ENST00000384672 102 ntBASIC2.28□□□□□ -2.04
NPIPA3F8WFD2 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
NPIPA3F8WFD2 RNA5SP390-201ENST00000410191 113 ntBASIC2.28□□□□□ -2.04
NPIPA3F8WFD2 POLHP1-201ENST00000411806 470 ntBASIC2.28□□□□□ -2.04
NPIPA3F8WFD2 CYCSP48-201ENST00000417124 323 ntBASIC2.28□□□□□ -2.04
NPIPA3F8WFD2 USP9YP27-201ENST00000418455 438 ntBASIC2.28□□□□□ -2.04
NPIPA3F8WFD2 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.28□□□□□ -2.04
NPIPA3F8WFD2 MTND3P21-201ENST00000433774 331 ntBASIC2.28□□□□□ -2.04
NPIPA3F8WFD2 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
NPIPA3F8WFD2 CKS1BP2-201ENST00000497342 240 ntBASIC2.28□□□□□ -2.04
NPIPA3F8WFD2 NAF1-205ENST00000509434 385 ntTSL 3 BASIC2.28□□□□□ -2.04
NPIPA3F8WFD2 HMGB3P3-201ENST00000510526 400 ntBASIC2.28□□□□□ -2.04
NPIPA3F8WFD2 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC2.28□□□□□ -2.04
NPIPA3F8WFD2 RNU6-189P-201ENST00000516120 101 ntBASIC2.28□□□□□ -2.04
NPIPA3F8WFD2 RNU1-104P-201ENST00000517280 175 ntBASIC2.28□□□□□ -2.04
NPIPA3F8WFD2 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC2.28□□□□□ -2.04
NPIPA3F8WFD2 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.28□□□□□ -2.04
NPIPA3F8WFD2 uc_338.15-201ENST00000615470 191 ntBASIC2.28□□□□□ -2.04
NPIPA3F8WFD2 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC2.28□□□□□ -2.04
NPIPA3F8WFD2 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.28□□□□□ -2.04
NPIPA3F8WFD2 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
NPIPA3F8WFD2 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
NPIPA3F8WFD2 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.28□□□□□ -2.05
NPIPA3F8WFD2 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.28□□□□□ -2.05
NPIPA3F8WFD2 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.28□□□□□ -2.05
NPIPA3F8WFD2 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.27□□□□□ -2.05
NPIPA3F8WFD2 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
NPIPA3F8WFD2 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.27□□□□□ -2.05
NPIPA3F8WFD2 RNU6-212P-201ENST00000362642 104 ntBASIC2.27□□□□□ -2.05
NPIPA3F8WFD2 RNU1-72P-201ENST00000362976 153 ntBASIC2.27□□□□□ -2.05
NPIPA3F8WFD2 RNU6-105P-201ENST00000363909 104 ntBASIC2.27□□□□□ -2.05
NPIPA3F8WFD2 SNORA67.1-201ENST00000364749 141 ntBASIC2.27□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms