Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC3.4□□□□□ -1.86
PCDHGA6Q9Y5G7 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
PCDHGA6Q9Y5G7 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
PCDHGA6Q9Y5G7 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
PCDHGA6Q9Y5G7 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.4□□□□□ -1.87
PCDHGA6Q9Y5G7 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
PCDHGA6Q9Y5G7 RNU6-490P-201ENST00000362985 107 ntBASIC3.4□□□□□ -1.87
PCDHGA6Q9Y5G7 RNU6-1141P-201ENST00000364520 107 ntBASIC3.4□□□□□ -1.87
PCDHGA6Q9Y5G7 SNORD42.2-201ENST00000365570 69 ntBASIC3.4□□□□□ -1.87
PCDHGA6Q9Y5G7 CD24P4-201ENST00000382840 243 ntBASIC3.4□□□□□ -1.87
PCDHGA6Q9Y5G7 RNU6-622P-201ENST00000384272 103 ntBASIC3.4□□□□□ -1.87
PCDHGA6Q9Y5G7 MIR544A-201ENST00000384855 91 ntBASIC3.4□□□□□ -1.87
PCDHGA6Q9Y5G7 MIR490-201ENST00000384865 128 ntBASIC3.4□□□□□ -1.87
PCDHGA6Q9Y5G7 RNU6-1304P-201ENST00000411374 106 ntBASIC3.4□□□□□ -1.87
PCDHGA6Q9Y5G7 RPL31P12-201ENST00000422587 358 ntBASIC3.4□□□□□ -1.87
PCDHGA6Q9Y5G7 AC006989.1-201ENST00000427212 131 ntBASIC3.4□□□□□ -1.87
PCDHGA6Q9Y5G7 AC078809.1-201ENST00000427601 140 ntBASIC3.4□□□□□ -1.87
PCDHGA6Q9Y5G7 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.4□□□□□ -1.87
PCDHGA6Q9Y5G7 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.4□□□□□ -1.87
PCDHGA6Q9Y5G7 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC3.4□□□□□ -1.87
PCDHGA6Q9Y5G7 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC3.4□□□□□ -1.87
PCDHGA6Q9Y5G7 RN7SL807P-201ENST00000470923 297 ntBASIC3.4□□□□□ -1.87
PCDHGA6Q9Y5G7 AP001025.1-201ENST00000486139 332 ntBASIC3.4□□□□□ -1.87
PCDHGA6Q9Y5G7 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.4□□□□□ -1.87
PCDHGA6Q9Y5G7 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.4□□□□□ -1.87
PCDHGA6Q9Y5G7 NDUFB9P3-201ENST00000521269 501 ntBASIC3.4□□□□□ -1.87
PCDHGA6Q9Y5G7 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.4□□□□□ -1.87
PCDHGA6Q9Y5G7 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC3.4□□□□□ -1.87
PCDHGA6Q9Y5G7 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
PCDHGA6Q9Y5G7 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC3.4□□□□□ -1.87
PCDHGA6Q9Y5G7 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.4□□□□□ -1.87
PCDHGA6Q9Y5G7 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.4□□□□□ -1.87
PCDHGA6Q9Y5G7 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.4□□□□□ -1.87
PCDHGA6Q9Y5G7 AC097372.5-201ENST00000623665 376 ntBASIC3.4□□□□□ -1.87
PCDHGA6Q9Y5G7 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.4□□□□□ -1.87
PCDHGA6Q9Y5G7 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
PCDHGA6Q9Y5G7 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
PCDHGA6Q9Y5G7 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
PCDHGA6Q9Y5G7 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
PCDHGA6Q9Y5G7 ZNF826P-207ENST00000622273 1910 ntBASIC3.39□□□□□ -1.87
PCDHGA6Q9Y5G7 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
PCDHGA6Q9Y5G7 SNORD114-19-201ENST00000363072 75 ntBASIC3.39□□□□□ -1.87
PCDHGA6Q9Y5G7 SNORA63-201ENST00000363450 132 ntBASIC3.39□□□□□ -1.87
PCDHGA6Q9Y5G7 RNU6-1059P-201ENST00000363752 98 ntBASIC3.39□□□□□ -1.87
PCDHGA6Q9Y5G7 RNA5SP42-201ENST00000364278 115 ntBASIC3.39□□□□□ -1.87
PCDHGA6Q9Y5G7 Y_RNA.395-201ENST00000383945 109 ntBASIC3.39□□□□□ -1.87
PCDHGA6Q9Y5G7 RNU6-890P-201ENST00000384121 107 ntBASIC3.39□□□□□ -1.87
PCDHGA6Q9Y5G7 RNU6-55P-201ENST00000411092 107 ntBASIC3.39□□□□□ -1.87
PCDHGA6Q9Y5G7 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC3.39□□□□□ -1.87
PCDHGA6Q9Y5G7 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC3.39□□□□□ -1.87
PCDHGA6Q9Y5G7 AC068781.1-201ENST00000488231 618 ntBASIC3.39□□□□□ -1.87
PCDHGA6Q9Y5G7 RPL22P13-201ENST00000493291 347 ntBASIC3.39□□□□□ -1.87
PCDHGA6Q9Y5G7 RNU6-470P-201ENST00000515954 104 ntBASIC3.39□□□□□ -1.87
PCDHGA6Q9Y5G7 RNU6-1213P-201ENST00000517075 94 ntBASIC3.39□□□□□ -1.87
PCDHGA6Q9Y5G7 MIR5696-201ENST00000578474 85 ntBASIC3.39□□□□□ -1.87
PCDHGA6Q9Y5G7 AC006077.1-201ENST00000604746 343 ntBASIC3.39□□□□□ -1.87
PCDHGA6Q9Y5G7 UCA1.1-201ENST00000620952 75 ntBASIC3.39□□□□□ -1.87
PCDHGA6Q9Y5G7 AC092608.2-201ENST00000624427 218 ntBASIC3.39□□□□□ -1.87
PCDHGA6Q9Y5G7 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
PCDHGA6Q9Y5G7 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
PCDHGA6Q9Y5G7 ZNF299P-201ENST00000406845 1804 ntBASIC3.39□□□□□ -1.87
PCDHGA6Q9Y5G7 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
PCDHGA6Q9Y5G7 AC058791.1-201ENST00000608412 3198 ntBASIC3.39□□□□□ -1.87
PCDHGA6Q9Y5G7 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
PCDHGA6Q9Y5G7 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
PCDHGA6Q9Y5G7 MAPK10-362ENST00000641864 4484 ntBASIC3.38□□□□□ -1.87
PCDHGA6Q9Y5G7 RNU6-1010P-201ENST00000362757 107 ntBASIC3.38□□□□□ -1.87
PCDHGA6Q9Y5G7 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.38□□□□□ -1.87
PCDHGA6Q9Y5G7 RNU6-692P-201ENST00000384496 107 ntBASIC3.38□□□□□ -1.87
PCDHGA6Q9Y5G7 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.38□□□□□ -1.87
PCDHGA6Q9Y5G7 AC138623.1-201ENST00000418060 216 ntBASIC3.38□□□□□ -1.87
PCDHGA6Q9Y5G7 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC3.38□□□□□ -1.87
PCDHGA6Q9Y5G7 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.38□□□□□ -1.87
PCDHGA6Q9Y5G7 RPL39P29-201ENST00000447779 157 ntBASIC3.38□□□□□ -1.87
PCDHGA6Q9Y5G7 AC016632.1-201ENST00000503994 196 ntBASIC3.38□□□□□ -1.87
PCDHGA6Q9Y5G7 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC3.38□□□□□ -1.87
PCDHGA6Q9Y5G7 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.38□□□□□ -1.87
PCDHGA6Q9Y5G7 SCARNA16.2-201ENST00000516520 172 ntBASIC3.38□□□□□ -1.87
PCDHGA6Q9Y5G7 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC3.38□□□□□ -1.87
PCDHGA6Q9Y5G7 TGIF1P1-201ENST00000558095 802 ntBASIC3.38□□□□□ -1.87
PCDHGA6Q9Y5G7 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC3.38□□□□□ -1.87
PCDHGA6Q9Y5G7 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC3.38□□□□□ -1.87
PCDHGA6Q9Y5G7 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.38□□□□□ -1.87
PCDHGA6Q9Y5G7 RPS15AP11-201ENST00000594193 385 ntBASIC3.38□□□□□ -1.87
PCDHGA6Q9Y5G7 RPL23AP78-201ENST00000599928 470 ntBASIC3.38□□□□□ -1.87
PCDHGA6Q9Y5G7 AL732372.2-225ENST00000642124 456 ntBASIC3.38□□□□□ -1.87
PCDHGA6Q9Y5G7 AP000560.1-201ENST00000624150 1937 ntBASIC3.38□□□□□ -1.87
PCDHGA6Q9Y5G7 MTND5P30-201ENST00000452896 1731 ntBASIC3.38□□□□□ -1.87
PCDHGA6Q9Y5G7 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
PCDHGA6Q9Y5G7 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.38□□□□□ -1.87
PCDHGA6Q9Y5G7 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC3.38□□□□□ -1.87
PCDHGA6Q9Y5G7 MTND4P27-201ENST00000450813 1354 ntBASIC3.38□□□□□ -1.87
PCDHGA6Q9Y5G7 AL356274.2-201ENST00000624379 3752 ntBASIC3.37□□□□□ -1.87
PCDHGA6Q9Y5G7 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
PCDHGA6Q9Y5G7 MFSD8-236ENST00000641509 4050 ntBASIC3.37□□□□□ -1.87
PCDHGA6Q9Y5G7 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
PCDHGA6Q9Y5G7 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.37□□□□□ -1.87
PCDHGA6Q9Y5G7 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC3.37□□□□□ -1.87
PCDHGA6Q9Y5G7 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
PCDHGA6Q9Y5G7 AC092268.1-201ENST00000342691 405 ntBASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 201.7 ms